The first identified Citrus tristeza virus isolate of Turkey contains a mixture of mild and severe strains

Plant Pathology Journal

Volumn 29, Issue 1, 2013, Pages 31-41

  Çevik, Bayram ^a   Yardimci, Nejla ^a   Korkmaz, Savaş ^b  

^a SULEYMAN DEMIREL UNIVERSITY   (Turkey)

^b ÇANAKKALE ONSEKIZ MART UNIVERSITY   (Turkey)

Author keywords

Citrus tristeza virus; Coat protein; Phylogenetic analysis; RNA dependent RNA polymerase; Strain identification

Indexed keywords

EID: 84884373388     PISSN: 15982254     EISSN: 20939280     Source Type: Journal    
DOI: 10.5423/PPJ.OA.09.2012.0141     Document Type: Article

References (41)

1. Albiach-Marti, M. R., Mawassi, M., Gowda, S., Satyanarayana, T., Hilf, M. E., Shankar, Sç, Almira, E. C., Vives, M. C., Lopez, C., Guerri, J., Flores, R., Moreno, P., Garnsey, S. M. and Dawson, W. O. 2000. Sequences of Citrus tristeza virus separated in time and space are essentially identical. J. Virol. 74:6856-6865.
2. Ayllón, M. A., Rubio, L., Sentandreu, V., Moya, A., Guerri, J. and Moreno, P. 2006. Variations in two gene sequences of Citrus tristeza virus after host passage. Virus Genes 32:119-128.
3. Baloglu, S. 1988. Identification, Purification, Serology (with ELISA and SDS-Immunodiffusion tests), and properties of Citrus tristeza virus (CTV) in East Mediterranean Region of Turkey. Ph.D. thesis. (in Turkish) Çukurova University, Adana, Turkey.
4. Baloglu, S. and Birisik, N. 2009. Historical review of Citrus tristeza virus (CTV) and its vectors in Turkey. In: Options Méditerranéennes, Series B.65 Citrus tristeza virus and Toxoptera citricidus: a serious threat to the Mediterranean citrus industry ed. by A. D'Onghia, K. Djelouah, C. N. Roistacher. pp 85-88. CIHEAM-IAMB, Bari, Italy.
5. Bar-Joseph, M., Garnsey, S. M. and Gonsalves, D. 1979. The Closteroviruses: a distinct group of elongated plant viruses. Adv. Virus Res. 25:93-168.
6. Bar-Joseph, M., Marcus, R. and Lee, R. F. 1989. The continuous challenge of Citrus tristeza virus control. Annu. Rev. Phytopathol. 27:291-316.
7. Bar-Joseph, M. and Lee, R. F. 1990. Citrus tristeza virus Description of Plant Viruses No, 353 Commonwealth Mycological Institute/Association of Applied Biologist Key Surrey, UK 7 pp.
8. th International Conference of IOCV ed. by J. V. da Graça, P. Moreno, R. K. Yokomi, pp. 17-24. IOCV, Riverside, CA.
9. Febres, V. J., Ashoulin, L., Mawassi, M., Frank, A., Bar-Joseph, M., Manjunath, K. L., Lee, R. F. and Niblett, C. L. 1996. The p27 protein is present at one end of Citrus tristeza virus particles. Phytopathology 86:1331-1335.
10. Garnsey, S. M., Gumpf, D. J., Roistacher, C. N., Civerolo, E., Lee, R. F., Yokomi, R. K. and Bar-Joseph, M. 1987. Toward a standard evaluation of the biologically properties of Citrus tristeza virus. Phytophylactica 19:151-157.
11. Halbert, S. E., Genc, H., Çevik, B., Brown, L. G., Rosales, I. M., Manjunath, K. L., Pomerinke, M., Davison, D. A., Lee, R. F. and Niblett, C. L. 2004. Distribution and characterization of Citrus tristeza virus in South Florida following establishment of Toxoptera citricida. Plant Dis. 88:935-941.
12. Harper, S. J., Dawson, T. E. and Pearson, M. N. 2009. Complete genome sequences of two distinct and diverse Citrus tristeza virus isolates from New Zealand. Arch. Virol. 154:1505-1510.
13. Harper, S. J., Dawson, T. E. and Pearson, M. N. 2010. Isolates of Citrus tristeza virus that overcome Poncirus trifoliata resistance comprise a novel strain. Arch. Virol. 155:471-480.
14. Ilharco, F. A., Sousa-Silva, C. R. and Álvarez, A. 2005. First report of Toxoptera citricidus (Kirkaldy) in continental Portugal and Spain (Homoptera, Aphidoidea). Agronomia Lusitana 51:19-21.
15. Herrera-Isidrón, L., Ochoa-Sánchez, J. C., Rivera-Bustamante, R. and Martínez-Soriano, J. P. 2009. Sequence diversity on four ORFs of Citrus tristeza virus correlates with pathogenicity. Virol. J. 6:116.
16. Karasev, A., Boyoko, V., Gowda, V., Nikolaeva, O. V., Hilf, M. E., Koonin, M., Niblett, C. L., Cline, K. C., Gumpf, D. J., Lee, R. F., Garnsey, S. M., Lewandoski, D. J. and Dawson, W. O. 1995. Complete sequence of the Citrus tristeza virus RNA genome. Virology 208:511-520.
17. Korkmaz, S. 2002. Investigation of biological properties, double-stranded RNA patterns and antigen concentration in citrus species infected with Citrus tristeza virus. Phytoparasitica 30: 420-428.
18. Korkmaz, S., Çevik, B., Önder, S. and Koç, N. K. 2006. First report of the presence of Citrus tristeza virus in the eastern Black Sea region of Turkey. J. Plant Path. 88(3, Sup.):69.
19. Korkmaz, S., Çevik, B., Önder, S. and Koç, N. K. 2008. Biological, serological, and molecular characterization of Citrus tristeza virus isolates from different citrus cultivation regions of Turkey. Turk J. Agric. For. 32:369-379.
20. Mawassi, M., Gafny, R. and Bar-Joseph, M. 1993. Nucleotide sequence of the coat protein gene of Citrus tristeza virus, Comparison of biologically diverse isolates collected in Israel. Virus Genes 73:265-275.
21. Mawassi, M., Mietkiewska, E., Gofman, R., Yang, G. and BarJoseph, M. 1996. Unusual sequence relationships between two isolates of Citrus tristeza virus. J. Gen. Virol. l77:2359-2364.
22. Moreno, P., Ambros, S., Albiach-Marti, M. R., Guerri, J. and Peña, L. 2008. Citrus tristeza virus: a pathogen that changed the course of the citrus industry. Mol. Plant. Pathol. 9:251-268.
23. Morris, T. J. and Dodds, J. A. 1979. Isolation and analysis of double-stranded RNA from virus-infected plant and fungal tissue. Phytopathology 69:854-858.
24. th International Conference of IOCV ed. by S. M. Garnsey, L. V. Timmer, A. J. Dodds, pp. 62-65 IOCV, Riverside, CA.
25. Niblett, C. L., Genc, H., Cevik, B., Halbert, S., Brown, L., Nolasco, G., Bonacalza, B., Manjunath, K. L., Febres, V. J., Pappu, H. R. and Lee, R. F. 2000. Progress on strain differentiation of Citrus tristeza virus and its application to the epidemiology of citrus tristeza disease. Virus Res. 71:97-106.
26. Nolasco, G., Santos, C., Silva, G. and Fonseca, F. 2009. Development of an asymmetric PCR-ELISA typing method for Citrustristeza virus based on the coat protein gene. J. Virol. Methods 155:97-108.
27. Pappu, H. R., Manjunath, K. L., Lee, R. F. and Niblett, C. L. 1993. Molecular characterization of a structural epitope that is largely conserved among severe isolates of a plant virus. Proc. Natl. Acad Sci. USA 90:641-3644.
28. Pappu, H. R., Karasev, A. V., Anderson, E. J., Pappu, S. S., Hilf, M. E., Febres, V. J., Eckolff, R. M. G., McCaffery, M., Boyoko, V., Gowda, S., Dolja, V. V., Koonin, E. V., Gumpf, D. J., Cline, K. C., Garnsey, S. M., Dawson, W. O., Lee, R. F. and Niblett, C. L. 1994. Nucleotide sequence and organization of eight 3' open reading frames of the citrus tristeza closterovirus genome. Virology 199:35-46.
29. Permar, T. A., Garnsey, S. M., Gumpf, D. J. and Lee, R. L. 1990. A monoclonal antibody that discriminate strains of Citrus tristeza virus. Phytopathology 80:224-228.
30. th International Conference of IOCV ed. by S. M. Garnsey, L. V. Timmer, A. J. Dodds, pp. 9-18. IOCV, Riverside, CA.
31. Rocha-Pena, M. A., Lee, R. F., Lastra, R., Niblett, C. L., Ochoa-Corona, F. M., Garnsey, S. M. and Yokomi, R. K. 1995. Citrus tristeza virus and its aphid vector Toxoptera citricida Threats to citrus production in the Caribbean and Central and North America. Plant Dis. 79:437-445.
32. Roistacher, C. N. and Bar-Joseph, M. 1987. Aphid transmission of Citrus tristeza virus: a rewiew. Phytophylactica 19:163-167.
33. Roy, A., Ramachandran, P. and Brlansky, R. H. 2003. Grouping and comparison of Indian Citrus tristeza virus isolates based on coat protein gene sequences and restriction analysis patterns. Arch. Virol. 148:707-722.
34. Sentandreu, V., Castro, J. A., Ayllón, M. A., Rubio, L., Guerri, J., González-Candelas, F., Moreno, P. and Moya, A. 2006. Evolutionary analysis of genetic variation observed in Citrus tristeza virus (CTV) after host passage. Arch. Virol. 151:875-894.
35. Sekiya, M. E., Lawrence, S. D., McCaffery, M. and Cline, K. 1991. Molecular cloning and nucleotide sequencing of the coat protein gene of Citrus tristeza virus. J. Gen. Virol. 72:1013-1020.
36. Suastika, G., Natsuaki, T., Terui, H., Kano, T., Ieki, H. and Okuda, S. 2001. Nucleotide sequence of Citrus tristeza virus seedling yellow isolate. J. Gen. Plant Pathol. 67:73-77.
37. Vives, M. C., Rubio, L., Lopez, C., Navas-Castillo, J., Albiach-Marti, M. R., Dawson, W. O., Guerri, J., Flores, R. and Moreno, P. 1999. The complete genome sequence of the major component of a mild Citrus tristeza virus isolate. J. Gen. Virol. 80: 811-816.
38. Yang, Z. N., Mathews, D. M., Dodds, J. A. and Mirkov, T. E. 1999. Molecular characterization of an isolate of Citrus tristeza virus that causes severe symptoms in sweet orange. Virus Genes 19:131-142.
39. Yilmaz, M. A. 1999. Virus and Virus-like diseases of citrus in Turkey In: Options Méditerranéennes, Proceedings of the Mediterranean network on certification of citrus 1995-1997 eds., G. P. Martelli, A. M. D'Onghia, pp. 85-93 CIHEAM-IAMB, Bari, Italy.
40. Yilmaz, M. A. and Baloglu, S. 1998. Detection of CTV by Immunoprinting in the Eastern Mediterranean Region of Turkey. In: Options Méditerranéennes, Series B.21 Proceedings of the Mediterranean Network on Certification of Citrus. pp. 129-133. CIHEAM-IAMB, Bari, Italy
41. Yokomi, R. K., Lastra, R., Stoetzel, M. B., Damsteegt, V. D., Lee, R. F., Garnsey, S. M., Gottwald, T. R., Rocha-Pena, M. A. and Niblett, C. L. 1994. Establishment of the brown citrus aphid (Homoptera:Aphididae) in Central America and the Caribbean Basin and transmission of Citrus tristeza virus. J. Econ. Entomol. 87:1078-1085.