메뉴 건너뛰기




Volumn 79, Issue 18, 2013, Pages 5777-5781

Assimilation of cellulose-derived carbon by microeukaryotes in oxic and anoxic slurries of an aerated soil

Author keywords

[No Author keywords available]

Indexed keywords

CARBON TRANSFER; CELLULOLYTIC BACTERIUM; CHRYSOPHYTES; METABOLIC PRODUCTS; MICRO-EUKARYOTES; OXIC CONDITIONS; SAPROTROPHIC FUNGI; STABLE-ISOTOPE PROBING;

EID: 84884273701     PISSN: 00992240     EISSN: 10985336     Source Type: Journal    
DOI: 10.1128/AEM.01598-13     Document Type: Article
Times cited : (16)

References (34)
  • 1
    • 70349296086 scopus 로고    scopus 로고
    • 2 in global carbon pools
    • 2 in global carbon pools. Energy Environ. Sci. 1:86-100.
    • (2008) Energy Environ. Sci. , vol.1 , pp. 86-100
    • Lal, R.1
  • 3
    • 0003804933 scopus 로고    scopus 로고
    • Dictionary of the fungi
    • ABI, Wallingford, United Kingdom., 10th ed
    • Kirk PM, Cannon PF, Minter DW, Stalpers JA (ed). 2008. Dictionary of the fungi, 10th ed. ABI, Wallingford, United Kingdom.
    • (2008)
    • Kirk, P.M.1    Cannon, P.F.2    Minter, D.W.3    Stalpers, J.A.4
  • 5
    • 0016279594 scopus 로고
    • The ocean's food web: A changing paradigm
    • Pomeroy LR. 1974. The ocean's food web: a changing paradigm. Bioscience 24:409-504.
    • (1974) Bioscience , vol.24 , pp. 409-504
    • Pomeroy, L.R.1
  • 6
    • 0001648492 scopus 로고
    • The microbial loop concept as used in terrestrial soil ecology studies
    • Coleman DC. 1994. The microbial loop concept as used in terrestrial soil ecology studies. Microb. Ecol. 28:245-250.
    • (1994) Microb. Ecol. , vol.28 , pp. 245-250
    • Coleman, D.C.1
  • 8
    • 79951674782 scopus 로고    scopus 로고
    • Bacterial populations assimilating carbon from C-13-labeled plant residue in soil: Analysis by a DNA-SIP approach
    • Lee CG, Watanabe T, Sato Y, Murase J, Asakawa S, Kimura M. 2011. Bacterial populations assimilating carbon from C-13-labeled plant residue in soil: analysis by a DNA-SIP approach. Soil Biol. Biochem. 43:814-822.
    • (2011) Soil Biol. Biochem. , vol.43 , pp. 814-822
    • Lee, C.G.1    Watanabe, T.2    Sato, Y.3    Murase, J.4    Asakawa, S.5    Kimura, M.6
  • 9
    • 77953023795 scopus 로고    scopus 로고
    • Metabolic responses of novel cellulolytic and saccharolytic agricultural soil Bacteria to oxygen
    • Schellenberger S, Kolb S, Drake HL. 2010. Metabolic responses of novel cellulolytic and saccharolytic agricultural soil Bacteria to oxygen. Environ. Microbiol. 12:845-861.
    • (2010) Environ. Microbiol. , vol.12 , pp. 845-861
    • Schellenberger, S.1    Kolb, S.2    Drake, H.L.3
  • 10
    • 0034468557 scopus 로고    scopus 로고
    • Rapid method for coextraction ofDNAandRNAfrom natural environments for analysis of ribosomal DNA-and rRNA-based microbial community composition
    • Griffiths RI, Whiteley AS, O'Donnell AG, Bailey MJ. 2000. Rapid method for coextraction ofDNAandRNAfrom natural environments for analysis of ribosomal DNA-and rRNA-based microbial community composition. Appl. Environ. Microbiol. 66:5488-5491.
    • (2000) Appl. Environ. Microbiol. , vol.66 , pp. 5488-5491
    • Griffiths, R.I.1    Whiteley, A.S.2    O'Donnell, A.G.3    Bailey, M.J.4
  • 11
    • 0842266326 scopus 로고    scopus 로고
    • Enhanced sensitivity of DNA-and rRNA-based stable isotope probing by fractionation and quantitative analysis of isopycnic centrifugation gradients
    • Lueders T, Manefield M, Friedrich MW. 2004. Enhanced sensitivity of DNA-and rRNA-based stable isotope probing by fractionation and quantitative analysis of isopycnic centrifugation gradients. Environ. Microbiol. 6:73-78.
    • (2004) Environ. Microbiol. , vol.6 , pp. 73-78
    • Lueders, T.1    Manefield, M.2    Friedrich, M.W.3
  • 13
    • 0025294528 scopus 로고
    • Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations
    • Amann RI, Binder BJ, Olson RJ, Chisholm SW, Devereux R, Stahl DA. 1990. Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl. Environ. Microbiol. 56:1919-1925.
    • (1990) Appl. Environ. Microbiol. , vol.56 , pp. 1919-1925
    • Amann, R.I.1    Binder, B.J.2    Olson, R.J.3    Chisholm, S.W.4    Devereux, R.5    Stahl, D.A.6
  • 14
    • 84855256371 scopus 로고    scopus 로고
    • Incorporation of plant residue-derived carbon into the microeukaryotic community in a rice field soil revealed by DNA stable-isotope probing
    • Murase J, Shibata M, Lee CG, Watanabe T, Asakawa S, Kimura M. 2012. Incorporation of plant residue-derived carbon into the microeukaryotic community in a rice field soil revealed by DNA stable-isotope probing. FEMS Microbiol. Ecol. 79:371-379.
    • (2012) FEMS Microbiol. Ecol. , vol.79 , pp. 371-379
    • Murase, J.1    Shibata, M.2    Lee, C.G.3    Watanabe, T.4    Asakawa, S.5    Kimura, M.6
  • 15
    • 84906284523 scopus 로고    scopus 로고
    • Fungi and eukaryotic algae
    • In Pau EA (ed), Soil microbiology, ecology and biochemistry. Academic Press, Oxford, United Kingdom.
    • Thorn RG, Lynch MDJ. 2007. Fungi and eukaryotic algae, p 145-163. In Pau EA (ed), Soil microbiology, ecology and biochemistry. Academic Press, Oxford, United Kingdom.
    • (2007) , pp. 145-163
    • Thorn, R.G.1    Lynch, M.D.J.2
  • 16
    • 34548128375 scopus 로고    scopus 로고
    • Root rot disease of legumes caused by Aphanomyces euteiches
    • Gaulin E, Jaquet C, Bottin A, Dumas B. 2007. Root rot disease of legumes caused by Aphanomyces euteiches. Mol. Plant Pathol. 8:539-548.
    • (2007) Mol. Plant Pathol. , vol.8 , pp. 539-548
    • Gaulin, E.1    Jaquet, C.2    Bottin, A.3    Dumas, B.4
  • 18
    • 0343717701 scopus 로고
    • Studies on wood degradation and cellulolytic activity of microfungi
    • Nilsson T. 1973. Studies on wood degradation and cellulolytic activity of microfungi. Stud. For. Suec. 104:2-40.
    • (1973) Stud. For. Suec. , vol.104 , pp. 2-40
    • Nilsson, T.1
  • 21
    • 77950353798 scopus 로고    scopus 로고
    • Decomposing ability of filamentous fungi on litter is involved in a subtropical mixed forest
    • Song F, Tian X, Fan X, He X. 2010. Decomposing ability of filamentous fungi on litter is involved in a subtropical mixed forest. Mycologia 102: 20-26.
    • (2010) Mycologia , vol.102 , pp. 20-26
    • Song, F.1    Tian, X.2    Fan, X.3    He, X.4
  • 22
    • 0036840287 scopus 로고    scopus 로고
    • RNA stable isotope probing, a novel means of linking microbial community function to phylogeny
    • Manefield M, Whiteley AS, Griffith RI, Bailey M. 2002. RNA stable isotope probing, a novel means of linking microbial community function to phylogeny. Appl. Environ. Microbiol. 68:5367-5373.
    • (2002) Appl. Environ. Microbiol. , vol.68 , pp. 5367-5373
    • Manefield, M.1    Whiteley, A.S.2    Griffith, R.I.3    Bailey, M.4
  • 23
    • 80052743654 scopus 로고    scopus 로고
    • Functionally redundant cellobiose-degrading soil bacteria respond differentially to oxygen
    • Schellenberger S, Drake HL, Kolb S. 2011. Functionally redundant cellobiose-degrading soil bacteria respond differentially to oxygen. Appl. Environ. Microbiol. 77:6043-6048.
    • (2011) Appl. Environ. Microbiol. , vol.77 , pp. 6043-6048
    • Schellenberger, S.1    Drake, H.L.2    Kolb, S.3
  • 24
    • 35948999735 scopus 로고    scopus 로고
    • Cultivationindependent analysis reveals a shift in ciliate 18S rRNA gene diversity in polycyclic aromatic hydrocarbon polluted soil
    • Lara E, Berney C, Harms H, Chatzinotas A. 2007. Cultivationindependent analysis reveals a shift in ciliate 18S rRNA gene diversity in polycyclic aromatic hydrocarbon polluted soil. FEMS Microbiol. Ecol. 62:365-373.
    • (2007) FEMS Microbiol. Ecol. , vol.62 , pp. 365-373
    • Lara, E.1    Berney, C.2    Harms, H.3    Chatzinotas, A.4
  • 25
    • 73349086199 scopus 로고    scopus 로고
    • Application of the denaturing gradient gel electrophoresis (DGGE) technique as an efficient diagnostic tool for ciliate communities in soil
    • Jousset E, Lara M, Nikolausz H, Harms A, Chatzinotas A. 2010. Application of the denaturing gradient gel electrophoresis (DGGE) technique as an efficient diagnostic tool for ciliate communities in soil. Sci. Total Environ. 408:1221-1225.
    • (2010) Sci. Total Environ. , vol.408 , pp. 1221-1225
    • Jousset, E.1    Lara, M.2    Nikolausz, H.3    Harms, A.4    Chatzinotas, A.5
  • 26
    • 70350151424 scopus 로고    scopus 로고
    • Genetic diversity of eukaryotic plankton assemblages in eastern Tibetan lakes differing by their salinity and altitude
    • Wu QL, Chatzinotas A, Wang J, Boenigk J. 2009. Genetic diversity of eukaryotic plankton assemblages in eastern Tibetan lakes differing by their salinity and altitude. Microb. Ecol. 58:569-581.
    • (2009) Microb. Ecol. , vol.58 , pp. 569-581
    • Wu, Q.L.1    Chatzinotas, A.2    Wang, J.3    Boenigk, J.4
  • 27
    • 34748814950 scopus 로고    scopus 로고
    • Succession and phylogenetic profile of eukaryotic communities in ricestraw incorporated into a rice field: estimation by PCR-DGGE and sequence analysis
    • Sugano A, Tsuchimoto H, Tun CC, Asakawa S, Kimura M. 2007. Succession and phylogenetic profile of eukaryotic communities in ricestraw incorporated into a rice field: estimation by PCR-DGGE and sequence analysis. Soil Sci. Plant Nutr. 53:585-594.
    • (2007) Soil Sci. Plant Nutr. , vol.53 , pp. 585-594
    • Sugano, A.1    Tsuchimoto, H.2    Tun, C.C.3    Asakawa, S.4    Kimura, M.5
  • 28
    • 5144229615 scopus 로고    scopus 로고
    • The ecology of soil decomposition
    • CABI Publishing, Wallingford, United Kingdom
    • Adl MS. 2003. The ecology of soil decomposition. CABI Publishing, Wallingford, United Kingdom.
    • (2003)
    • Adl, M.S.1
  • 29
    • 33748937355 scopus 로고    scopus 로고
    • Protists in soil ecology and forest nutrient cycling
    • Adl MS, Gupta VVSR. 2006. Protists in soil ecology and forest nutrient cycling. Can. J. For. Res. 36:1805-1817.
    • (2006) Can. J. For. Res. , vol.36 , pp. 1805-1817
    • Adl, M.S.1    Gupta, V.V.S.R.2
  • 30
    • 0036010835 scopus 로고    scopus 로고
    • The soil flagellate Proleptomonas faecicola: cell organisation and phylogeny suggest that the only described free-living trypanosomatid is not a kinetoplastid but has cercomonad affinities
    • Vickerman K, Le Ray D, Hoef-Emden K, De Jonckheere J. 2002. The soil flagellate Proleptomonas faecicola: cell organisation and phylogeny suggest that the only described free-living trypanosomatid is not a kinetoplastid but has cercomonad affinities. Protist 153:9-24.
    • (2002) Protist , vol.153 , pp. 9-24
    • Vickerman, K.1    Le Ray, D.2    Hoef-Emden, K.3    De Jonckheere, J.4
  • 31
    • 0030621331 scopus 로고    scopus 로고
    • A classification of mixotrophic protists based on their behavior
    • Jones HLJ. 1997. A classification of mixotrophic protists based on their behavior. Freshwater Biol. 37:35-43.
    • (1997) Freshwater Biol. , vol.37 , pp. 35-43
    • Jones, H.L.J.1
  • 32
    • 84861124100 scopus 로고    scopus 로고
    • Identification of cellulose-responsive bacterial and fungal communities in geographically and edaphically different soils by using stable isotope probing
    • Eichorst SA, Kuske CR. 2012. Identification of cellulose-responsive bacterial and fungal communities in geographically and edaphically different soils by using stable isotope probing. Appl. Environ. Microbiol. 78:2316-2327.
    • (2012) Appl. Environ. Microbiol. , vol.78 , pp. 2316-2327
    • Eichorst, S.A.1    Kuske, C.R.2
  • 33
    • 77954089282 scopus 로고    scopus 로고
    • Disruption of root carbon transport into forest humus stimulates fungal opportunists at the expense of mycorrhizal fungi
    • Lindahl BD, de Boer W, Finlay RD. 2010. Disruption of root carbon transport into forest humus stimulates fungal opportunists at the expense of mycorrhizal fungi. ISME J. 4:872-881.
    • (2010) ISME J. , vol.4 , pp. 872-881
    • Lindahl, B.D.1    de Boer, W.2    Finlay, R.D.3
  • 34
    • 78650326886 scopus 로고    scopus 로고
    • Development of a fatty acid and RNA stable isotope probing-based method for tracking protist grazing on bacteria in wastewater
    • Kuppardt S, Chatzinotas A, Kästner M. 2010. Development of a fatty acid and RNA stable isotope probing-based method for tracking protist grazing on bacteria in wastewater. Appl. Environ. Microbiol. 76:8222-8230.
    • (2010) Appl. Environ. Microbiol. , vol.76 , pp. 8222-8230
    • Kuppardt, S.1    Chatzinotas, A.2    Kästner, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.