메뉴 건너뛰기




Volumn 1069, Issue , 2013, Pages 119-146

High-throughput and targeted genotyping of Lotus japonicus LORE1 insertion mutants

Author keywords

FST; FSTpoolit; Insertion mutagenesis; LORE1; Next generation sequencing; Retrotransposon; Reverse genetics

Indexed keywords

ARTICLE; DATA ANALYSIS; DNA BARCODING; GENETIC POLYMORPHISM; GENOTYPE; LOTUS JAPONICUS; MUTAGENESIS; MUTANT; NONHUMAN; PRIORITY JOURNAL; RETROPOSON; REVERSE GENETICS;

EID: 84884189552     PISSN: 10643745     EISSN: None     Source Type: Book Series    
DOI: 10.1007/978-1-62703-613-9_10     Document Type: Article
Times cited : (10)

References (20)
  • 1
    • 84856728402 scopus 로고    scopus 로고
    • Genome-wide LORE1 retrotransposon mutagenesis and highthroughput insertion detection in Lotus japonicus
    • Urbański DF, Małolepszy A, Stougaard J, Andersen SU (2012) Genome-wide LORE1 retrotransposon mutagenesis and highthroughput insertion detection in Lotus japonicus. Plant J 69:731-741
    • (2012) Plant J , vol.69 , pp. 731-741
    • Urbański, D.F.1    Małolepszy, A.2    Stougaard, J.3    Andersen, S.U.4
  • 2
    • 84856727215 scopus 로고    scopus 로고
    • Establishment of a Lotus japonicus gene tagging population using the exon-targeting endogenous retrotransposon LORE1
    • Fukai E, Soyano T, Umehara Y, Nakayama S, Hirakawa H, Tabata S et al (2012) Establishment of a Lotus japonicus gene tagging population using the exon-targeting endogenous retrotransposon LORE1. Plant J 69:720-730
    • (2012) Plant J , vol.69 , pp. 720-730
    • Fukai, E.1    Soyano, T.2    Umehara, Y.3    Nakayama, S.4    Hirakawa, H.5    Tabata, S.6
  • 3
    • 62549091022 scopus 로고    scopus 로고
    • Rearrangement of actin cytoskeleton mediates invasion of Lotus japonicus roots by Mesorhizobium loti
    • Yokota K, Fukai E, Madsen LH, Jurkiewicz A, Rueda P, Radutoiu S et al (2009) Rearrangement of actin cytoskeleton mediates invasion of Lotus japonicus roots by Mesorhizobium loti. Plant Cell 21:267-284
    • (2009) Plant Cell , vol.21 , pp. 267-284
    • Yokota, K.1    Fukai, E.2    Madsen, L.H.3    Jurkiewicz, A.4    Rueda, P.5    Radutoiu, S.6
  • 4
    • 0037182899 scopus 로고    scopus 로고
    • A plant receptor-like kinase required for both bacterial and fungal symbiosis
    • Stracke S, Kistner C, Yoshida S, Mulder L, Sato S, Kaneko T et al (2002) A plant receptor-like kinase required for both bacterial and fungal symbiosis. Nature 417:959-962
    • (2002) Nature , vol.417 , pp. 959-962
    • Stracke, S.1    Kistner, C.2    Yoshida, S.3    Mulder, L.4    Sato, S.5    Kaneko, T.6
  • 5
    • 31044456012 scopus 로고    scopus 로고
    • A nucleoporin is required for induction of Ca2+ spiking in legume nodule development and essential for rhizobial and fungal symbiosis
    • Kanamori N, Madsen LH, Radutoiu S, Frantescu M, Quistgaard EM, Miwa H et al (2006) A nucleoporin is required for induction of Ca2+ spiking in legume nodule development and essential for rhizobial and fungal symbiosis. Proc Natl Acad Sci U S A 103: 359-364
    • (2006) Proc Natl Acad Sci U S A , vol.103 , pp. 359-364
    • Kanamori, N.1    Madsen, L.H.2    Radutoiu, S.3    Frantescu, M.4    Quistgaard, E.M.5    Miwa, H.6
  • 6
    • 33644845346 scopus 로고    scopus 로고
    • LORE1, an active low-copy-number TY3-gypsy retrotransposon family in the model legume Lotus japonicus
    • Madsen LH, Fukai E, Radutoiu S, Yost CK, Sandal N, Schauser L et al (2005) LORE1, an active low-copy-number TY3-gypsy retrotransposon family in the model legume Lotus japonicus. Plant J 44:372-381
    • (2005) Plant J , vol.44 , pp. 372-381
    • Madsen, L.H.1    Fukai, E.2    Radutoiu, S.3    Yost, C.K.4    Sandal, N.5    Schauser, L.6
  • 7
    • 77950373636 scopus 로고    scopus 로고
    • Derepression of the plant chromovirus LORE1 induces germline transposition in regenerated plants
    • Fukai E, Umehara Y, Sato S, Endo M, Kouchi H, Hayashi M et al (2010) Derepression of the plant chromovirus LORE1 induces germline transposition in regenerated plants. PLoS Genet 6:e1000868
    • (2010) PLoS Genet , vol.6
    • Fukai, E.1    Umehara, Y.2    Sato, S.3    Endo, M.4    Kouchi, H.5    Hayashi, M.6
  • 8
    • 0041419305 scopus 로고    scopus 로고
    • Target Site Specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome
    • Miyao A, Tanaka K, Murata K, Sawaki H, Takeda S, Abe K et al (2003) Target Site Specificity of the Tos17 retrotransposon shows a preference for insertion within genes and against insertion in retrotransposon-rich regions of the genome. Plant Cell 15:1771-1780
    • (2003) Plant Cell , vol.15 , pp. 1771-1780
    • Miyao, A.1    Tanaka, K.2    Murata, K.3    Sawaki, H.4    Takeda, S.5    Abe, K.6
  • 9
    • 0038375024 scopus 로고    scopus 로고
    • Efficient transposition of the Tnt1 tobacco retrotransposon in the model legume Medicago truncatula
    • D'Erfurth I, Cosson V, Eschstruth A, Lucas H, Kondorosi A, Ratet P (2003) Efficient transposition of the Tnt1 tobacco retrotransposon in the model legume Medicago truncatula. Plant J 34:95-106
    • (2003) Plant J , vol.34 , pp. 95-106
    • D'Erfurth, I.1    Cosson, V.2    Eschstruth, A.3    Lucas, H.4    Kondorosi, A.5    Ratet, P.6
  • 10
    • 0021402042 scopus 로고
    • Purification and properties of cinnamoyl CoA reductase and cinnamyl alcohol dehydrogenase from poplar stems (Populus X euramericana)
    • Sarni F, Grand C, Boudet AM (1984) Purification and properties of cinnamoyl CoA reductase and cinnamyl alcohol dehydrogenase from poplar stems (Populus X euramericana). Eur J Biochem 139:259-265
    • (1984) Eur J Biochem , vol.139 , pp. 259-265
    • Sarni, F.1    Grand, C.2    Boudet, A.M.3
  • 11
    • 0031105944 scopus 로고    scopus 로고
    • Cinnamoyl CoA reductase, the first committed enzyme of the lignin branch biosynthetic pathway: Cloning, expression and phylogenetic relationships
    • Lacombe E, Hawkins S, Doorsselaere J, Piquemal J, Goffner D, Poeydomenge O et al (1997) Cinnamoyl CoA reductase, the first committed enzyme of the lignin branch biosynthetic pathway: cloning, expression and phylogenetic relationships. Plant J 11: 429-441
    • (1997) Plant J , vol.11 , pp. 429-441
    • Lacombe, E.1    Hawkins, S.2    Doorsselaere, J.3    Piquemal, J.4    Goffner, D.5    Poeydomenge, O.6
  • 12
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen S, Skaletsky H (2000) Primer3 on the WWW for general users and for biologist programmers. Methods Mol Biol 132:365-386
    • (2000) Methods Mol Biol , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 14
    • 0029437396 scopus 로고
    • Agrobacterium rhizogenes as a vector for transforming higher plants. Application in Lotus corniculatus transformation
    • Stougaard J (1995) Agrobacterium rhizogenes as a vector for transforming higher plants. Application in Lotus corniculatus transformation. Methods Mol Biol 49:49-61
    • (1995) Methods Mol Biol , vol.49 , pp. 49-61
    • Stougaard, J.1
  • 15
    • 0007411311 scopus 로고
    • Lotus japonicus, an autogamous, diploid legume species for classical and molecular genetics
    • Handberg K, Stougaard J (1992) Lotus japonicus, an autogamous, diploid legume species for classical and molecular genetics. Plant J 2: 487-496
    • (1992) Plant J , vol.2 , pp. 487-496
    • Handberg, K.1    Stougaard, J.2
  • 16
    • 0011382110 scopus 로고    scopus 로고
    • Transgenic plants: Agrobacterium-mediated transformation of the diploid legume Lotus japonicus
    • In: Celis JE (ed), 2nd edn. Academic, New York
    • Thykjær T, Schauser L, Danielsen D, Finneman J, Stougaard J (1998) Transgenic plants: agrobacterium-mediated transformation of the diploid legume Lotus japonicus. In: Celis JE (ed) Cell biology: a laboratory handbook, vol 3, 2nd edn. Academic, New York, pp 518-525
    • (1998) Cell Biology: A Laboratory Handbook , vol.3 , pp. 518-525
    • Thykjær, T.1    Schauser, L.2    Danielsen, D.3    Finneman, J.4    Stougaard, J.5
  • 17
    • 0028990259 scopus 로고
    • Splinkerettes-improved vectorettes for greater efficiency in PCR walking
    • Devon RS, Porteous DJ, Brookes AJ (1995) Splinkerettes-improved vectorettes for greater efficiency in PCR walking. Nucleic Acids Res 23:1644-1645
    • (1995) Nucleic Acids Res , vol.23 , pp. 1644-1645
    • Devon, R.S.1    Porteous, D.J.2    Brookes, A.J.3
  • 18
    • 0026101630 scopus 로고
    • Precipitation of DNA by polyethylene glycol and ethanol
    • Paithankar KR, Prasad KSN (1991) Precipitation of DNA by polyethylene glycol and ethanol. Nucleic Acids Res 19:1346
    • (1991) Nucleic Acids Res , vol.19 , pp. 1346
    • Paithankar, K.R.1    Prasad, K.S.N.2
  • 19
    • 54849430320 scopus 로고    scopus 로고
    • Transposition of a 600 thousand-year-old LTR retrotransposon in the model legume Lotus japonicus
    • Fukai E, Dobrowolska AD, Madsen LH, Madsen EB, Umehara Y, Kouchi H et al (2008) Transposition of a 600 thousand-year-old LTR retrotransposon in the model legume Lotus japonicus. Plant Mol Biol 68:653-663
    • (2008) Plant Mol Biol , vol.68 , pp. 653-663
    • Fukai, E.1    Dobrowolska, A.D.2    Madsen, L.H.3    Madsen, E.B.4    Umehara, Y.5    Kouchi, H.6
  • 20
    • 0019321718 scopus 로고
    • Rapid isolation of high molecular weight plant DNA
    • Murray MG, Thompson WF (1980) Rapid isolation of high molecular weight plant DNA. Nucleic Acids Res 8:4321-4326
    • (1980) Nucleic Acids Res , vol.8 , pp. 4321-4326
    • Murray, M.G.1    Thompson, W.F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.