Species differentiation of Bacteroides dorei from Bacteroides vulgatus and Bacteroides ovatus from Bacteroides xylanisolvens - Back to basics

Anaerobe

Volumn 24, Issue , 2013, Pages 1-3

  Pedersen, Rune M ^a   Marmolin, Ea S ^a   Justesen, Ulrik S ^a  

^a ODENSE UNIVERSITY HOSPITAL   (Denmark)

Author keywords

Glucosidase; Bacteroides; MALDI TOF MS

Indexed keywords

BETA GLUCOSIDASE; CATALASE; RNA 16S;

ARTICLE; BACTERIUM CULTURE; BACTERIUM IDENTIFICATION; BACTERIUM ISOLATE; BACTEROIDES; BACTEROIDES OVATUS; BACTEROIDES VULGATUS; BACTEROIDES XYLANISOLVENS; BLOOD CULTURE; CONSENSUS SEQUENCE; CONTROLLED STUDY; ENZYME MECHANISM; GENETIC SCREENING; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; NONHUMAN; PHENOTYPE; PRIORITY JOURNAL; RNA SEQUENCE; SPECIES DIFFERENCE;

BACTEROIDES; MALDI-TOF MS; Β-GLUCOSIDASE;

BACTERIAL TYPING TECHNIQUES; BACTEROIDES; BETA-GLUCOSIDASE; DNA, BACTERIAL; DNA, RIBOSOMAL; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 84884146900     PISSN: 10759964     EISSN: 10958274     Source Type: Journal    
DOI: 10.1016/j.anaerobe.2013.08.004     Document Type: Article

References (9)

1. Citron D.M., Appelbaum P.C. How far should a clinical laboratory go in identifying anaerobic isolates, and who should pay?. Clin Infect Dis 1993, 16(Suppl.4):S435-S438.
2. Justesen U.S., Skov M.N., Knudsen E., Holt H.M., Søgaard P., Justesen T. 16S rRNA gene sequencing in routine identification of anaerobic bacteria isolated from blood cultures. JClin Microbiol 2010, 48:946-948.
3. Justesen U.S., Holm A., Knudsen E., Andersen L.B., Jensen T.G., Kemp M., et al. Species identification of clinical isolates of anaerobic bacteria: a comparison of two matrix-assisted laser desorption ionization-time of flight mass spectrometry systems. JClin Microbiol 2011, 49:4314-4318.
4. Wessels E., Schelfaut J.J., Bernards A.T., Claas E.C. Evaluation of several biochemical and molecular techniques for identification of Streptococcus pneumoniae and Streptococcus pseudopneumoniae and their detection in respiratory samples. JClin Microbiol 2012, 50:1171-1177.
5. Aldridge K.E., Ashcraft D., O'Brien M., Sanders C.V. Bacteremia due to Bacteroides fragilis group: distribution of species, beta-lactamase production, and antimicrobial susceptibility patterns. Antimicrob Agents Chemother 2003, 47:148-153.
6. Bakir M.A., Sakamoto M., Kitahara M., Matsumoto M., Benno Y. Bacteroides dorei sp. nov., isolated from human faeces. Int J Syst Evol Microbiol 2006, 56:1639-1643.
7. Chassard C., Delmas E., Lawson P.A., Bernalier-Donadille A. Bacteroides xylanisolvens sp. nov., a xylan-degrading bacterium isolated from human faeces. Int J Syst Evol Microbiol 2008, 58:1008-1013.
8. Chun J., Lee J.H., Jung Y., Kim M., Kim S., Kim B.K., et al. EzTaxon: a web-based tool for the identification of prokaryotes based on 16S ribosomal RNA gene sequences. Int J Syst Evol Microbiol 2007, 57:2259-2261.
9. Clinical and Laboratory Standards Institute Interpretive criteria for identification of bacteria and fungi by DNA target sequencing. Approved standard MM18-A 2008, Clinical and Laboratory Standards Institute, Wayne, PA. 1st ed.