메뉴 건너뛰기




Volumn 67, Issue , 2013, Pages 62-69

Sequential extraction of denitrifying organisms from soils; strongly attached cells produce less N2O than loosely attached cells

Author keywords

Cells; Denitrification; Extraction; N2O; N2O reduction; Soil

Indexed keywords

DENITRIFYING ORGANISMS; EXPOSED SURFACES; ORGANIC MATERIALS; OXYGEN DEPLETION; RELATIVE FREQUENCIES; SEQUENTIAL EXTRACTION; SOIL MATRICES; SOIL PARTICLES;

EID: 84883690569     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.soilbio.2013.08.007     Document Type: Article
Times cited : (9)

References (35)
  • 1
    • 23844439557 scopus 로고    scopus 로고
    • Trace metal exposure of soil bacteria depends on their position in the soil matrix
    • Almås Å.R., Mulder J., Bakken L.R. Trace metal exposure of soil bacteria depends on their position in the soil matrix. Environmental Science & Technology 2005, 39:5927-5932.
    • (2005) Environmental Science & Technology , vol.39 , pp. 5927-5932
    • Almås Å, R.1    Mulder, J.2    Bakken, L.R.3
  • 3
    • 0021796885 scopus 로고
    • Separation and purification of bacteria from soil
    • Bakken L.R. Separation and purification of bacteria from soil. Applied and Environmental Microbiology 1985, 49:1482-1487.
    • (1985) Applied and Environmental Microbiology , vol.49 , pp. 1482-1487
    • Bakken, L.R.1
  • 5
    • 79551489592 scopus 로고    scopus 로고
    • Denitrification regulatory phenotype, a new term for the characterization of denitrifying bacteria
    • Bergaust L., Bakken L., Frostegård Å. Denitrification regulatory phenotype, a new term for the characterization of denitrifying bacteria. Biochemical Society Transactions 2011, 39:207-212.
    • (2011) Biochemical Society Transactions , vol.39 , pp. 207-212
    • Bergaust, L.1    Bakken, L.2    Frostegård, Å.3
  • 6
    • 78049309864 scopus 로고    scopus 로고
    • Denitrification response patterns during the transition to anoxic respiration and posttranscriptional effects of suboptimal pH on nitrogen oxide reductase in Paracoccus denitrificans
    • Bergaust L., Mao Y.J., Bakken L.R., Frostegard A. Denitrification response patterns during the transition to anoxic respiration and posttranscriptional effects of suboptimal pH on nitrogen oxide reductase in Paracoccus denitrificans. Applied and Environmental Microbiology 2010, 76:6387-6396.
    • (2010) Applied and Environmental Microbiology , vol.76 , pp. 6387-6396
    • Bergaust, L.1    Mao, Y.J.2    Bakken, L.R.3    Frostegard, A.4
  • 7
    • 79960898142 scopus 로고    scopus 로고
    • 2O-producing microbial communities in soils-what matters for their functioning?
    • 2O-producing microbial communities in soils-what matters for their functioning?. Advances in Applied Microbiology 2011, 75:33-70.
    • (2011) Advances in Applied Microbiology , vol.75 , pp. 33-70
    • Braker, G.1    Conrad, R.2
  • 8
    • 84855290081 scopus 로고    scopus 로고
    • Genetic characterization of denitrifier communities with contrasting intrinsic functional traits
    • Braker G., Dörsch P., Bakken L.R. Genetic characterization of denitrifier communities with contrasting intrinsic functional traits. FEMS Microbiology Ecology 2012, 79:542-554.
    • (2012) FEMS Microbiology Ecology , vol.79 , pp. 542-554
    • Braker, G.1    Dörsch, P.2    Bakken, L.R.3
  • 10
    • 84855258322 scopus 로고    scopus 로고
    • Community-specific pH response of denitrification: experiments with cells extracted from organic soils
    • Dörsch P., Braker G., Bakken L.R. Community-specific pH response of denitrification: experiments with cells extracted from organic soils. FEMS Microbiology Ecology 2012, 79:530-541.
    • (2012) FEMS Microbiology Ecology , vol.79 , pp. 530-541
    • Dörsch, P.1    Braker, G.2    Bakken, L.R.3
  • 11
    • 0003191649 scopus 로고
    • Particle-size analysis of soil
    • Helsinki, Finland
    • Elonen P. Particle-size analysis of soil. Acta Agriculture Fennica 1971, 122:1-122. Helsinki, Finland.
    • (1971) Acta Agriculture Fennica , vol.122 , pp. 1-122
    • Elonen, P.1
  • 13
    • 77951498193 scopus 로고    scopus 로고
    • Ecological and evolutionary factors underlying global and local assembly of denitrifier communities
    • Jones C.M., Hallin S. Ecological and evolutionary factors underlying global and local assembly of denitrifier communities. The ISME Journal 2010, 4:633-641.
    • (2010) The ISME Journal , vol.4 , pp. 633-641
    • Jones, C.M.1    Hallin, S.2
  • 14
    • 0028985414 scopus 로고
    • Evaluation of methods for extraction of bacteria from soil
    • Lindahl V., Bakken L.R. Evaluation of methods for extraction of bacteria from soil. FEMS Microbiology Ecology 1995, 16:135-142.
    • (1995) FEMS Microbiology Ecology , vol.16 , pp. 135-142
    • Lindahl, V.1    Bakken, L.R.2
  • 16
    • 84885184182 scopus 로고    scopus 로고
    • Strains in the genus Thauera exhibit remarkably different denitrification regulatory phenotypes
    • (online)
    • Liu B., Mao Y., Bergaust L., Bakken L.R., Frostegård Å. Strains in the genus Thauera exhibit remarkably different denitrification regulatory phenotypes. Environmental Microbiology 2013, (online). 10.1111/1462-2920.12142.
    • (2013) Environmental Microbiology
    • Liu, B.1    Mao, Y.2    Bergaust, L.3    Bakken, L.R.4    Frostegård, Å.5
  • 17
    • 41449108290 scopus 로고    scopus 로고
    • Relationship between nitrifier and denitrifier community composition and abundance in predicting nitrous oxide emissions from ephemeral wetland soils
    • Ma W.K., Bedard-Haughn A., Siciliano S.D., Farrell R.E. Relationship between nitrifier and denitrifier community composition and abundance in predicting nitrous oxide emissions from ephemeral wetland soils. Soil Biology & Biochemistry 2008, 40:1114-1123.
    • (2008) Soil Biology & Biochemistry , vol.40 , pp. 1114-1123
    • Ma, W.K.1    Bedard-Haughn, A.2    Siciliano, S.D.3    Farrell, R.E.4
  • 20
    • 84860511582 scopus 로고    scopus 로고
    • The Black Queen hypothesis: evolution of dependencies through adaptive gene loss
    • Morris J.J., Lenski R.E., Zinser E.R. The Black Queen hypothesis: evolution of dependencies through adaptive gene loss. MBio 2012, 3(2):e00036. 10.1128/mBio.00036-12.
    • (2012) MBio , vol.3 , Issue.2
    • Morris, J.J.1    Lenski, R.E.2    Zinser, E.R.3
  • 21
    • 84873142201 scopus 로고    scopus 로고
    • The significance of early accumulation of nanomolar concentrations of NO as an inducer of denitrification
    • Nadeem S., Dörsch P., Bakken L.R. The significance of early accumulation of nanomolar concentrations of NO as an inducer of denitrification. FEMS Microbiology Ecology 2013, 83:672-684.
    • (2013) FEMS Microbiology Ecology , vol.83 , pp. 672-684
    • Nadeem, S.1    Dörsch, P.2    Bakken, L.R.3
  • 22
    • 0041707994 scopus 로고    scopus 로고
    • Shifts in diversity and microscale distribution of the adapted bacterial phenotypes due to Hg (II) spiking in soil
    • Nazaret S., Brothier E., Ranjard L. Shifts in diversity and microscale distribution of the adapted bacterial phenotypes due to Hg (II) spiking in soil. Microbial Ecology 2003, 45:259-269.
    • (2003) Microbial Ecology , vol.45 , pp. 259-269
    • Nazaret, S.1    Brothier, E.2    Ranjard, L.3
  • 23
    • 35148888713 scopus 로고    scopus 로고
    • Ecology of denitrifying prokaryotes in agricultural soil
    • Philippot L., Hallin S., Schloter M. Ecology of denitrifying prokaryotes in agricultural soil. Advances in Agronomy 2007, 96:249-305.
    • (2007) Advances in Agronomy , vol.96 , pp. 249-305
    • Philippot, L.1    Hallin, S.2    Schloter, M.3
  • 24
    • 0034466653 scopus 로고    scopus 로고
    • Sequencing bands of ribosomal intergenic spacer analysis fingerprints for characterization and microscale distribution of soil bacterium populations responding to mercury spiking
    • Ranjard L., Brothier E., Nazaret S. Sequencing bands of ribosomal intergenic spacer analysis fingerprints for characterization and microscale distribution of soil bacterium populations responding to mercury spiking. Applied and Environmental Microbiology 2000, 66:5334-5339.
    • (2000) Applied and Environmental Microbiology , vol.66 , pp. 5334-5339
    • Ranjard, L.1    Brothier, E.2    Nazaret, S.3
  • 25
    • 0034803155 scopus 로고    scopus 로고
    • Quantitative and qualitative microscale distribution of bacteria in soil
    • Ranjard L., Richaume A. Quantitative and qualitative microscale distribution of bacteria in soil. Research in Microbiology 2001, 152:707-716.
    • (2001) Research in Microbiology , vol.152 , pp. 707-716
    • Ranjard, L.1    Richaume, A.2
  • 26
    • 0001791797 scopus 로고
    • Phosphate retention by New Zealand soils and its relationship to free sesquioxides, organic matter, and other soil properties
    • Saunders W. Phosphate retention by New Zealand soils and its relationship to free sesquioxides, organic matter, and other soil properties. New Zealand Journal of Agricultural Research 1965, 8:30-57.
    • (1965) New Zealand Journal of Agricultural Research , vol.8 , pp. 30-57
    • Saunders, W.1
  • 28
    • 0026701550 scopus 로고
    • Rapid analysis of climate gases by wide bore capillary gas-chromatography
    • Sitaula B.K., Luo J.F., Bakken L.R. Rapid analysis of climate gases by wide bore capillary gas-chromatography. Journal of Environmental Quality 1992, 21:493-496.
    • (1992) Journal of Environmental Quality , vol.21 , pp. 493-496
    • Sitaula, B.K.1    Luo, J.F.2    Bakken, L.R.3
  • 30
    • 70349664289 scopus 로고    scopus 로고
    • On the origin of ecological structure
    • Stokstad E. On the origin of ecological structure. Science 2009, 326:33-35.
    • (2009) Science , vol.326 , pp. 33-35
    • Stokstad, E.1
  • 31
    • 84882900454 scopus 로고    scopus 로고
    • Introduction to the biochemistry and molecular biology of denitrification
    • Elsevier, Amsterdam, H. Bothe, S. Ferguson, W.E. Newton (Eds.)
    • Van Spanning R.J.M., Richardson D., Ferguson S. Introduction to the biochemistry and molecular biology of denitrification. Biology of the Nitrogen Cycle 2007, 4-20. Elsevier, Amsterdam. H. Bothe, S. Ferguson, W.E. Newton (Eds.).
    • (2007) Biology of the Nitrogen Cycle , pp. 4-20
    • Van Spanning, R.J.M.1    Richardson, D.2    Ferguson, S.3
  • 32
    • 33845492873 scopus 로고    scopus 로고
    • Environmental controls on denitrifying communities and denitrification rates: insights from molecular methods
    • Wallenstein M.D., Myrold D.D., Firestone M., Voytek M. Environmental controls on denitrifying communities and denitrification rates: insights from molecular methods. Ecological Applications 2006, 16:2143-2152.
    • (2006) Ecological Applications , vol.16 , pp. 2143-2152
    • Wallenstein, M.D.1    Myrold, D.D.2    Firestone, M.3    Voytek, M.4
  • 34
    • 0028784056 scopus 로고
    • Role of pore size location in determining bacterial activity during predation by protozoa in soil
    • Wright D., Killham K., Glover L.A., Prosser J.I. Role of pore size location in determining bacterial activity during predation by protozoa in soil. Applied and Environmental Microbiology 1995, 61:3537-3543.
    • (1995) Applied and Environmental Microbiology , vol.61 , pp. 3537-3543
    • Wright, D.1    Killham, K.2    Glover, L.A.3    Prosser, J.I.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.