메뉴 건너뛰기




Volumn 23, Issue 9, 2013, Pages 1395-1409

NAHR-mediated copy-number variants in a clinical population: Mechanistic insights into both genomic disorders and Mendelizing traits

(28)  Dittwald, Piotr a,b,c   Gambin, Tomasz a,d   Szafranski, Przemyslaw a   Li, Jian a   Amato, Stephen e   Divon, Michael Y f   Rojas, Lisa Ximena Rodríguez g   Elton, Lindsay E h   Scott, Daryl A a   Schaaf, Christian P a   Torres Martinez, Wilfredo i   Stevens, Abby K i   Rosenfeld, Jill A j   Agadi, Satish a   Francis, David k   Kang, Sung Hae L a   Breman, Amy a   Lalani, Seema R a   Bacino, Carlos A a   Bi, Weimin a   more..


Author keywords

[No Author keywords available]

Indexed keywords

BUNGAROTOXIN RECEPTOR; DNA; NPHP1 PROTEIN; PROTEIN; UNCLASSIFIED DRUG;

EID: 84883679009     PISSN: 10889051     EISSN: 15495469     Source Type: Journal    
DOI: 10.1101/gr.152454.112     Document Type: Article
Times cited : (111)

References (65)
  • 6
    • 56749154242 scopus 로고    scopus 로고
    • Recurrent reciprocal 1q21.1 deletions and duplications associated with microcephaly or macrocephaly and developmental and behavioral abnormalities
    • Brunetti-Pierri N, Berg JS, Scaglia F, Belmont J, Bacino CA, Sahoo T, Lalani SR, Graham B, Lee B, Shinawi M, et al. 2008. Recurrent reciprocal 1q21.1 deletions and duplications associated with microcephaly or macrocephaly and developmental and behavioral abnormalities. Nat Genet 40: 1466-1471.
    • (2008) Nat Genet , vol.40 , pp. 1466-1471
    • Brunetti-Pierri, N.1    Berg, J.S.2    Scaglia, F.3    Belmont, J.4    Bacino, C.A.5    Sahoo, T.6    Lalani, S.R.7    Graham, B.8    Lee, B.9    Shinawi, M.10
  • 7
    • 79952094336 scopus 로고    scopus 로고
    • Gene conversion in human genetic disease
    • Chen JM, Férec C, Cooper DN. 2010. Gene conversion in human genetic disease. Genes 1: 550-563.
    • (2010) Genes , vol.1 , pp. 550-563
    • Chen, J.M.1    Férec, C.2    Cooper, D.N.3
  • 9
    • 67749099543 scopus 로고    scopus 로고
    • Gene conversion causing human inherited disease: Evidence for involvement of non-B-DNA-forming sequences and recombinationpromoting motifs in DNA breakage and repair
    • Chuzhanova N, Chen JM, Bacolla A, Patrinos GP, Férec C, Wells RD, Cooper DN. 2009. Gene conversion causing human inherited disease: Evidence for involvement of non-B-DNA-forming sequences and recombinationpromoting motifs in DNA breakage and repair. Hum Mutat 30: 1189-1198.
    • (2009) Hum Mutat , vol.30 , pp. 1189-1198
    • Chuzhanova, N.1    Chen, J.M.2    Bacolla, A.3    Patrinos, G.P.4    Férec, C.5    Wells, R.D.6    Cooper, D.N.7
  • 11
    • 54549102143 scopus 로고    scopus 로고
    • Identification of human haploinsufficient genes and their genomic proximity to segmental duplications
    • Dang VT, Kassahn KS, Marcos AE, Ragan MA. 2008. Identification of human haploinsufficient genes and their genomic proximity to segmental duplications. Eur J Hum Genet 16: 1350-1357.
    • (2008) Eur J Hum Genet , vol.16 , pp. 1350-1357
    • Dang, V.T.1    Kassahn, K.S.2    Marcos, A.E.3    Ragan, M.A.4
  • 17
    • 0036851314 scopus 로고    scopus 로고
    • Genomic structure and evolution of the ancestral chromosome fusion site in 2q13-2q14.1 and paralogous regions on other human chromosomes
    • Fan Y, Linardopoulou E, Friedman C, Williams E, Trask BJ. 2002. Genomic structure and evolution of the ancestral chromosome fusion site in 2q13-2q14.1 and paralogous regions on other human chromosomes. Genome Res 12: 1651-1662.
    • (2002) Genome Res , vol.12 , pp. 1651-1662
    • Fan, Y.1    Linardopoulou, E.2    Friedman, C.3    Williams, E.4    Trask, B.J.5
  • 19
    • 80755187820 scopus 로고    scopus 로고
    • Human copy number variation and complex genetic disease
    • Girirajan S, Campbell CD, Eichler EE. 2011. Human copy number variation and complex genetic disease. Annu Rev Genet 45: 203-226.
    • (2011) Annu Rev Genet , vol.45 , pp. 203-226
    • Girirajan, S.1    Campbell, C.D.2    Eichler, E.E.3
  • 23
    • 59249105978 scopus 로고    scopus 로고
    • A microhomology-mediated breakinduced replication model for the origin of human copy number variation
    • Hastings PJ, Ira G, Lupski Jr. 2009. A microhomology-mediated breakinduced replication model for the origin of human copy number variation. PLoS Genet 5: e1000327.
    • (2009) PLoS Genet , vol.5
    • Hastings, P.J.1    Ira, G.2    Lupski, J.R.3
  • 25
    • 0034080060 scopus 로고    scopus 로고
    • A novel Sta glycophorin produced via gene conversion of pseudoexon III from glycophorin e to glycophorin A gene
    • Huang CH, Chen Y, Blumenfeld OO. 2000. A novel Sta glycophorin produced via gene conversion of pseudoexon III from glycophorin E to glycophorin A gene. Hum Mutat 15: 533-540.
    • (2000) Hum Mutat , vol.15 , pp. 533-540
    • Huang, C.H.1    Chen, Y.2    Blumenfeld, O.O.3
  • 26
    • 78449263023 scopus 로고    scopus 로고
    • Characterising and predicting haploinsufficiency in the human genome
    • Huang N, Lee I, Marcotte EM, Hurles ME. 2010. Characterising and predicting haploinsufficiency in the human genome. PLoS Genet 6: e1001154.
    • (2010) PLoS Genet , vol.6
    • Huang, N.1    Lee, I.2    Marcotte, E.M.3    Hurles, M.E.4
  • 27
    • 51649107017 scopus 로고    scopus 로고
    • Rare chromosomal deletions and duplications increase risk of schizophrenia
    • The International Schizophrenia Consortium
    • The International Schizophrenia Consortium. 2008. Rare chromosomal deletions and duplications increase risk of schizophrenia. Nature 455: 237-241.
    • (2008) Nature , vol.455 , pp. 237-241
  • 32
    • 37349109667 scopus 로고    scopus 로고
    • A DNA replication mechanism for generating nonrecurrent rearrangements associated with genomic disorders
    • Lee JA, Carvalho CM, Lupski Jr. 2007. A DNA replication mechanism for generating nonrecurrent rearrangements associated with genomic disorders. Cell 131: 1235-1247.
    • (2007) Cell , vol.131 , pp. 1235-1247
    • Lee, J.A.1    Carvalho, C.M.2    Lupski, J.R.3
  • 35
    • 33749056284 scopus 로고    scopus 로고
    • A chromosomal rearrangement hot spot can be identified from population genetic variation and is coincident with a hot spot for allelic recombination
    • Lindsay SJ, Khajavi M, Lupski JR, Hurles ME. 2006. A chromosomal rearrangement hot spot can be identified from population genetic variation and is coincident with a hot spot for allelic recombination. Am J Hum Genet 79: 890-902.
    • (2006) Am J Hum Genet , vol.79 , pp. 890-902
    • Lindsay, S.J.1    Khajavi, M.2    Lupski, J.R.3    Hurles, M.E.4
  • 36
    • 80053908833 scopus 로고    scopus 로고
    • Frequency of nonallelic homologous recombination is correlated with length of homology: Evidence that ectopic synapsis precedes ectopic crossing-over
    • Liu P, Lacaria M, Zhang F, Withers M, Hastings PJ, Lupski Jr. 2011. Frequency of nonallelic homologous recombination is correlated with length of homology: Evidence that ectopic synapsis precedes ectopic crossing-over. Am J Hum Genet 89: 580-588.
    • (2011) Am J Hum Genet , vol.89 , pp. 580-588
    • Liu, P.1    Lacaria, M.2    Zhang, F.3    Withers, M.4    Hastings, P.J.5    Lupski, J.R.6
  • 37
    • 84862491113 scopus 로고    scopus 로고
    • Mechanisms for recurrent and complex human genomic rearrangements
    • Liu P, Carvalho CM, Hastings P, Lupski Jr. 2012. Mechanisms for recurrent and complex human genomic rearrangements. Curr Opin Genet Dev 22: 211-220.
    • (2012) Curr Opin Genet Dev , vol.22 , pp. 211-220
    • Liu, P.1    Carvalho, C.M.2    Hastings, P.3    Lupski, J.R.4
  • 38
    • 0031731487 scopus 로고    scopus 로고
    • Genomic disorders: Structural features of the genome can lead to DNA rearrangements and human disease traits
    • Lupski Jr. 1998. Genomic disorders: Structural features of the genome can lead to DNA rearrangements and human disease traits. Trends Genet 14: 417-422.
    • (1998) Trends Genet , vol.14 , pp. 417-422
    • Lupski, J.R.1
  • 39
    • 8444225364 scopus 로고    scopus 로고
    • Hot spots of homologous recombination in the human genome: Not all homologous sequences are equal
    • Lupski Jr. 2004. Hot spots of homologous recombination in the human genome: Not all homologous sequences are equal. Genome Biol 5: 242.
    • (2004) Genome Biol , vol.5 , pp. 242
    • Lupski, J.R.1
  • 40
    • 67649973564 scopus 로고    scopus 로고
    • Genomic disorders ten years on
    • Lupski Jr. 2009. Genomic disorders ten years on. Genome Med 1: 42.
    • (2009) Genome Med , vol.1 , pp. 42
    • Lupski, J.R.1
  • 42
    • 73849149737 scopus 로고    scopus 로고
    • Genotype to phenotype-discovery and characterization of novel genomic disorders in a "genotype-first" era
    • Mefford HC. 2009. Genotype to phenotype-discovery and characterization of novel genomic disorders in a "genotype-first" era. GenetMed 11: 836-842.
    • (2009) GenetMed , vol.11 , pp. 836-842
    • Mefford, H.C.1
  • 44
    • 33751526542 scopus 로고    scopus 로고
    • New insights into the biological basis of genomic disorders
    • Myers SR, McCarroll SA. 2006. New insights into the biological basis of genomic disorders. Nat Genet 38: 1363-1364.
    • (2006) Nat Genet , vol.38 , pp. 1363-1364
    • Myers, S.R.1    McCarroll, S.A.2
  • 45
    • 50449088155 scopus 로고    scopus 로고
    • A common sequence motif associated with recombination hot spots and genome instability in humans
    • Myers S, Freeman C, Auton A, Donnely P, McVean G. 2008. A common sequence motif associated with recombination hot spots and genome instability in humans. Nat Genet 40: 1124-1129.
    • (2008) Nat Genet , vol.40 , pp. 1124-1129
    • Myers, S.1    Freeman, C.2    Auton, A.3    Donnely, P.4    McVean, G.5
  • 47
    • 0029592804 scopus 로고
    • Miropeats: Graphical DNA sequence comparisons
    • Parsons JD. 1995. Miropeats: Graphical DNA sequence comparisons. Comput Appl Biosci 11: 615-619.
    • (1995) Comput Appl Biosci , vol.11 , pp. 615-619
    • Parsons, J.D.1
  • 56
    • 77953704493 scopus 로고    scopus 로고
    • Recurrent reciprocal 16p11.2 rearrangements associated with global developmental delay, behavioural problems, dysmorphism, epilepsy, and abnormal head size
    • Shinawi M, Liu P, Kang SH, Shen J, Belmont JW, Scott DA, Probst FJ, Craigen WJ, Graham BH, Pursley A, et al. 2010. Recurrent reciprocal 16p11.2 rearrangements associated with global developmental delay, behavioural problems, dysmorphism, epilepsy, and abnormal head size. J Med Genet 47: 332-341.
    • (2010) J Med Genet , vol.47 , pp. 332-341
    • Shinawi, M.1    Liu, P.2    Kang, S.H.3    Shen, J.4    Belmont, J.W.5    Scott, D.A.6    Probst, F.J.7    Craigen, W.J.8    Graham, B.H.9    Pursley, A.10
  • 57
    • 0036468807 scopus 로고    scopus 로고
    • Genome architecture, rearrangements and genomic disorders
    • Stankiewicz P, Lupski Jr. 2002. Genome architecture, rearrangements and genomic disorders. Trends Genet 18: 74-82.
    • (2002) Trends Genet , vol.18 , pp. 74-82
    • Stankiewicz, P.1    Lupski, J.R.2
  • 58
    • 77949831756 scopus 로고    scopus 로고
    • Structural variation in the human genome and its role in disease
    • Stankiewicz P, Lupski Jr. 2010. Structural variation in the human genome and its role in disease. Annu Rev Med 61: 437-455.
    • (2010) Annu Rev Med , vol.61 , pp. 437-455
    • Stankiewicz, P.1    Lupski, J.R.2
  • 63
    • 0035141062 scopus 로고    scopus 로고
    • Mutational analysis of patients with p47-phox-deficient chronic granulomatous disease: The significance of recombination events between the p47-phox gene (NCF1) and its highly homologous pseudogenes
    • Va'zquez N, Lehrnbecher T, Chen R, Christensen BL, Gallin JI, Malech H, Holland S, Zhu S, Chanock SJ. 2001. Mutational analysis of patients with p47-phox-deficient chronic granulomatous disease: The significance of recombination events between the p47-phox gene (NCF1) and its highly homologous pseudogenes. Exp Hematol 29: 234-243.
    • (2001) Exp Hematol , vol.29 , pp. 234-243
    • Va'Zquez, N.1    Lehrnbecher, T.2    Chen, R.3    Christensen, B.L.4    Gallin, J.I.5    Malech, H.6    Holland, S.7    Zhu, S.8    Chanock, S.J.9
  • 64
    • 84856280414 scopus 로고    scopus 로고
    • Microdeletion and microduplication syndromes
    • Vissers LE, Stankiewicz P. 2012. Microdeletion and microduplication syndromes. Methods Mol Biol 838: 29-75.
    • (2012) Methods Mol Biol , vol.838 , pp. 29-75
    • Vissers, L.E.1    Stankiewicz, P.2
  • 65
    • 84856428775 scopus 로고    scopus 로고
    • A recurrent 1.71 Mb genomic imbalance at 2q13 increases the risk of developmental delay and dysmorphism
    • Yu HE, Hawash K, Picker J, Stoler J, Urion D, Wu BL, Shen Y. 2012. A recurrent 1.71 Mb genomic imbalance at 2q13 increases the risk of developmental delay and dysmorphism. Clin Genet 81: 257-264.
    • (2012) Clin Genet , vol.81 , pp. 257-264
    • Yu, H.E.1    Hawash, K.2    Picker, J.3    Stoler, J.4    Urion, D.5    Wu, B.L.6    Shen, Y.7


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.