Informational basis of sensory adaptation: Entropy and single-spike efficiency in rat barrel cortex

Journal of Neuroscience

Volumn 33, Issue 37, 2013, Pages 14921-14926

  Adibi, Mehdi ^a,c   Clifford, Colin W G ^b   Arabzadeh, Ehsan ^a,c  

^a UNIVERSITY OF NEW SOUTH WALES   (Australia)

^b UNIVERSITY OF SYDNEY   (Australia)

^c Biology and Environment   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

ADAPTATION; AMPLITUDE MODULATION; ANIMAL EXPERIMENT; ARTICLE; ENTROPY; MAGNITUDE ESTIMATION METHOD; MALE; NONHUMAN; PRIORITY JOURNAL; RAT; SOMATOSENSORY CORTEX; SPIKE WAVE;

ACTION POTENTIALS; ADAPTATION, PHYSIOLOGICAL; ANIMALS; BRAIN MAPPING; ENTROPY; INFORMATION THEORY; RATS; SENSORY RECEPTOR CELLS; SOMATOSENSORY CORTEX; STATISTICS, NONPARAMETRIC;

EID: 84883665022     PISSN: 02706474     EISSN: 15292401     Source Type: Journal    
DOI: 10.1523/JNEUROSCI.1313-13.2013     Document Type: Article

References (36)

1. Adibi M, Arabzadeh E (2011) A comparison of neuronal and behavioral detection and discrimination performances in rat whisker system. J Neurophysiol 105:356-365. CrossRef Medline
2. Adibi M, Diamond ME, Arabzadeh E (2012) Behavioral study of whiskermediated vibration sensation in rats. Proc Natl Acad Sci U S A 109: 971-976. CrossRef Medline
3. Adibi M, McDonald JS, Clifford CWG, Arabzadeh E (2013) Adaptation improves neural coding efficiency despite increasing correlations in variability. J Neurosci 33:2108-2120. CrossRef Medline
4. Arabzadeh E, Panzeri S, Diamond ME (2004) Whisker vibration information carried by rat barrel cortex neurons. J Neurosci 24:6011-6020. CrossRef Medline
5. Arabzadeh E, Panzeri S, Diamond ME (2006) Deciphering the spike train of a sensory neuron: counts and temporal patterns in the rat whisker pathway. J Neurosci 26:9216-9226. CrossRef Medline
6. Atick JJ (1992) Could information theory provide an ecological theory of sensory processing? Network 3:213-251. CrossRef
7. Attneave F (1954) Some informational aspects of visual perception. Psychol Rev 61:183-193. CrossRef Medline
8. Barlow HB (1961a) The coding of sensory messages. In: Current problems in animal behaviour (Thorpe WH, Zangwill OL, eds), pp 331-360. New York: Cambridge UP.
9. Barlow HB (1961b) Possible principles underlying the transformation of sensory messages. Sens Commun 217-234.
10. Clifford CWG, Langley K (1996) Psychophysics of motion adaptation parallels insect electrophysiology. Curr Biol 6:1340-1342. CrossRef Medline
11. Clifford CWG, Wenderoth P (1999) Adaptation to temporal modulation can enhance differential speed sensitivity. Vision Res 39:4324-4332. CrossRef Medline
12. Clifford CWG, Wyatt AM, Arnold DH, Smith ST, Wenderoth P (2001) Orthogonal adaptation improves orientation discrimination. Vision Res 41: 151-159. CrossRef Medline
13. Cohen MR, Kohn A (2011) Measuring and interpreting neuronal correlations. Nat Neurosci 14:811-819. CrossRef Medline
14. Cover TM, Thomas JA (1991) Elements of information theory: New York: Wiley.
15. Dean I, Harper NS, McAlpine D (2005) Neural population coding of sound level adapts to stimulus statistics. Nat Neurosci 8:1684-1689. CrossRef Medline
16. Diamond ME, Arabzadeh E (2013) Whisker sensory system-from receptor to decision. Prog Neurobiol 103:28-40. CrossRef Medline
17. Durant S, Clifford CWG, Crowder NA, Price NSC, Ibbotson MR (2007) Characterizing contrast adaptation in a population of cat primary visual cortical neurons using Fisher information. J Opt Soc Am A Opt Image Sci Vis 24:1529-1537. CrossRef Medline
18. Gaudry KS, Reinagel P (2007) Benefits of contrast normalization demonstrated in neurons and model cells. J Neurosci 27:8071-8079. CrossRef Medline
19. Hosoya T, Baccus SA, Meister M (2005) Dynamic predictive coding by the retina. Nature 436:71-77. CrossRef Medline
20. Khatri V, Bruno RM, Simons DJ (2009) Stimulus-specific and stimulusnonspecific firing synchrony and its modulation by sensory adaptation in the whisker-to-barrel pathway. J Neurophysiol 101:2328-2338. Medline
21. Kobayashi S, Pinto de Carvalho O, Schultz W (2010) Adaptation of reward sensitivity in orbitofrontal neurons. J Neurosci 30:534-544. CrossRef Medline
22. Krekelberg B, van Wezel RJA, Albright TD (2006) Adaptation in macaque MT reduces perceived speed and improves speed discrimination. J Neurophysiol 95:255-270. Medline
23. Kvale MN, Schreiner CE (2004) Short-term adaptation of auditory receptive fields to dynamic stimuli. J Neurophysiol 91:604-612. Medline
24. Magri C, Whittingstall K, Singh V, Logothetis NK, Panzeri S (2009) A toolbox for the fast information analysis of multiple-site LFP, EEG and spike train recordings. BMC Neurosci 10:81. CrossRef Medline
25. Maravall M, Petersen RS, Fairhall AL, Arabzadeh E, Diamond ME (2007) Shifts in coding properties and maintenance of information transmission during adaptation in barrel cortex. PLoS Biol 5:e19. CrossRef Medline
26. Noudoost B, Adibi M, Moeeny A, Esteky H (2005) Configural and analytical processing of familiar and unfamiliar objects. Brain Res Cogn Brain Res 24:436-441. CrossRef Medline
27. Panzeri S, Treves A (1996) Analytical estimates of limited sampling biases in different information measures. Network 7:87-107. CrossRef
28. Panzeri S, Senatore R, Montemurro MA, Petersen RS (2007) Correcting for the sampling bias problem in spike train information measures. J Neurophysiol 98:1064-1072. CrossRef Medline
29. Pestilli F, Viera G, Carrasco M (2007) How do attention and adaptation affect contrast sensitivity? J Vis 7(7):9 1-12. CrossRef
30. Price NS, Born RT (2013) Adaptation to speed in macaque middle temporal and medial superior temporal areas. J Neurosci 33:4359-4368. CrossRef Medline
31. Reinagel P, Reid RC (2000) Temporal coding of visual information in the thalamus. J Neurosci 20:5392-5400. Medline
32. Shannon CE (1948) A mathematical theory of communication. Bell Syst Tech J 27:379-423, 623-656.
33. Smirnakis SM, Berry MJ, Warland DK, Bialek W, Meister M (1997) Adaptation of retinal processing to image contrast and spatial scale. Nature 386:69-73. CrossRef Medline
34. Srinivasan MV, Laughlin SB, Dubs A (1982) Predictive coding: a fresh view of inhibition in the retina. Proc R Soc Lond B Biol Sci 216:427-459. CrossRef Medline
35. Vinje WE, Gallant JL (2002) Natural stimulation of the nonclassical receptive field increases information transmission efficiency in V1. J Neurosci 22:2904-2915. Medline
36. Wang Q, Webber RM, Stanley GB (2010) Thalamic synchrony and the adaptive gating of information flow to cortex. Nat Neurosci 13:1534-1541. CrossRef Medline