The genome of Cronobacter sakazakii bacteriophage vB_CsaP_GAP227 suggests a new genus within the Autographivirinae

Genome Announcements

Volumn 1, Issue 1, 2013, Pages

  Abbasifar, Reza ^a   Kropinski, Andrew M ^a,b   Sabour, Parviz M ^c   Ackermann, Hans Wolfgang ^d   Villa, Argentina Alanis ^a   Abbasifar, Arash ^a   Griffiths, Mansel W ^a  

^a UNIVERSITY OF GUELPH   (Canada)

^b PUBLIC HEALTH AGENCY OF CANADA   (Canada)

^c AGRICULTURE AND AGRI FOOD CANADA   (Canada)

^d UNIVERSITÉ LAVAL   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84883446485     PISSN: None     EISSN: 21698287     Source Type: Journal    
DOI: 10.1128/genomeA.00122-12     Document Type: Article

References (20)

1. Gurtler JB, Kornacki JL, Beuchat LR. 2005. Enterobacter sakazakii: a coliform of increased concern to infant health. Int. J. Food Microbiol. 104:1-34.
2. Centers for Disease Control and Prevention. 2002. Enterobacter sakazakii infections associated with the use of powdered infant formula-Tennessee, 2001. Morb. Mortal. Wkly. Rep. 51:297-300.
3. Lai KK. 2001. Enterobacter sakazakii infections among neonates, infants, children, and adults. Case reports and a review of the literature. Medicine (Baltimore) 80:113-122.
4. Goodridge LD, Bisha B. 2011. Phage-based biocontrol strategies to reduce foodborne pathogens in foods. Bacteriophage 1:130-137.
5. Kropinski AM. 2006. Phage therapy-everything old is new again. Can. J. Infect. Dis. Med. Microbiol. 17:297-306.
6. Abbasifar R, Kropinski AM, Sabour PM, Ackermann HW, Alanis Villa A, Abbasifar A, Griffiths MW. 2012. Genome sequence of Cronobacter sakazakii myovirus vB_CsaM_GAP31. J. Virol. 86:18380-18381.
7. Abbasifar R, Kropinski AM, Sabour PM, Ackermann HW, Lingohr EJ, Griffiths MW. 2012. Complete genome sequence of Cronobacter sakazakii bacteriophage vB_CsaM_GAP161. J. Virol. 86:13806-13807.
8. Lee YD, Chang HI, Park JH. 2011. Complete genomic sequence of virulent Cronobacter sakazakii phage ESSI-2 isolated from swine feces. Arch. Virol. 156:721-724.
9. Lee YD, Park JH, Chang HI. 2011. Genomic sequence analysis of virulent Cronobacter sakazakii bacteriophage ES2. Arch. Virol. 156:2105-2108.
10. Shin H, Lee JH, Kim Y, Ryu S. 2012. Complete genome sequence of Cronobacter sakazakii bacteriophage CR3. J. Virol. 86:6367-6368.
11. Lee YD, Kim JY, Park JH, Chang H. 2012. Genomic analysis of bacteriophage ESP2949-1, which is virulent for Cronobacter sakazakii. Arch. Virol. 157:199-202.
12. Lee JH, Choi Y, Shin H, Lee J, Ryu S. 2012. Complete genome sequence of Cronobacter sakazakii temperate bacteriophage phiES15. J. Virol. 86: 7713-7714.
13. Lee YD, Park JH. 2012. Complete genome of temperate phage ENT39118 from Cronobacter sakazakii. J. Virol. 86:5400-5401.
14. Van Twest R, Kropinski AM. 2009. Bacteriophage enrichment from water and soil, p 15-21. In Clokie MR, Kropinski AM (ed), Bacteriophages: methods and protocols, vol. 1: isolation, characterization, and interactions. Humana Press, New York, NY.
15. Ackermann HW. 2005. Bacteriophage classification, p 67-89. In Kutter E, Sulakvelidze A (ed), Bacteriophages: biology and applications. CRC Press, Boca Raton, FL.
16. Zhang Z, Schwartz S, Wagner L, Miller W. 2000. A greedy algorithm for aligning DNA sequences. J. Comput. Biol. 7:203-214.
17. Kim JH, Son JS, Choresca CH, Shin SP, Han JE, Jun JW, Kang DH, Oh C, Heo SJ, Park SC. 2012. Complete genome sequence of bacteriophage phiAS7, a T7-like virus that infects Aeromonas salmonicida subsp. salmonicida. J. Virol. 86:2894-2895.
18. Zafar N, Mazumder R, Seto D. 2002. CoreGenes: a computational tool for identifying and cataloging "core" genes in a set of small genomes.BMC Bioinformatics 3:12.
19. Lavigne R, Burkal'tseva MV, Robben J, Sykilinda NN, Kurochkina LP, Grymonprez B, Jonckx B, Krylov VN, Mesyanzhinov VV, Volckaert G. 2003. The genome of bacteriophage phiKMV, a T7-like virus infecting Pseudomonas aeruginosa. Virology 312:49-59.
20. Saha S, Raghava GP. 2007. BTXpred: prediction of bacterial toxins. In Silico Biol. 7:405-412.