-
1
-
-
84873752686
-
Japanese B encephalitis
-
Lewis L, Taylor HG, Sorem MB, Norcross JW, Kindsvatter VH, (1947) Japanese B encephalitis. Arch Neurol Psychiatry 57: 430-463.
-
(1947)
Arch Neurol Psychiatry
, vol.57
, pp. 430-463
-
-
Lewis, L.1
Taylor, H.G.2
Sorem, M.B.3
Norcross, J.W.4
Kindsvatter, V.H.5
-
2
-
-
0006162686
-
Isolation of the virus of Japanese encephalitis from mosquitoes caught in nature
-
Mitamura T, Kitaoka M, Mori K, Okubo K, (1938) Isolation of the virus of Japanese encephalitis from mosquitoes caught in nature. Tokyo Iji Shinshi 62: 820.
-
(1938)
Tokyo Iji Shinshi
, vol.62
, pp. 820
-
-
Mitamura, T.1
Kitaoka, M.2
Mori, K.3
Okubo, K.4
-
3
-
-
0006239511
-
Ecologic studies of Japanese encephalitis virus in Japan. IX. Epidemiologic correlations and conclusions
-
Buescher EL, Scherer WF, (1959) Ecologic studies of Japanese encephalitis virus in Japan. IX. Epidemiologic correlations and conclusions. Am J Trop Med Hyg 8: 719-722.
-
(1959)
Am J Trop Med Hyg
, vol.8
, pp. 719-722
-
-
Buescher, E.L.1
Scherer, W.F.2
-
4
-
-
0006166097
-
Ecologic studies of Japanese encephalitis virus in Japan. IV. Avian infection
-
Buescher EL, Scherer WF, Mc CH, Moyer JT, Rosenberg MZ, et al. (1959) Ecologic studies of Japanese encephalitis virus in Japan. IV. Avian infection. Am J Trop Med Hyg 8: 678-688.
-
(1959)
Am J Trop Med Hyg
, vol.8
, pp. 678-688
-
-
Buescher, E.L.1
Scherer, W.F.2
Mc, C.H.3
Moyer, J.T.4
Rosenberg, M.Z.5
-
5
-
-
0000797919
-
Ecologic studies of Japanese encephalitis virus in Japan. II. Mosquito infection
-
Buescher EL, Scherer WF, Rosenberg MZ, Gresser I, Hardy JL, et al. (1959) Ecologic studies of Japanese encephalitis virus in Japan. II. Mosquito infection. Am J Trop Med Hyg 8: 651-664.
-
(1959)
Am J Trop Med Hyg
, vol.8
, pp. 651-664
-
-
Buescher, E.L.1
Scherer, W.F.2
Rosenberg, M.Z.3
Gresser, I.4
Hardy, J.L.5
-
6
-
-
17444375744
-
Immunologic studies of Japanese encephalitis virus in Japan. IV. Maternal antibody in birds
-
Buescher EL, Scherer WF, Rosenberg MZ, Kutner LJ, Mc CH, (1959) Immunologic studies of Japanese encephalitis virus in Japan. IV. Maternal antibody in birds. J Immunol 83: 614-619.
-
(1959)
J Immunol
, vol.83
, pp. 614-619
-
-
Buescher, E.L.1
Scherer, W.F.2
Rosenberg, M.Z.3
Kutner, L.J.4
Mc, C.H.5
-
7
-
-
0006181624
-
Immunologic studies of Japanese encephalitis virus in Japan. III. Infection and antibody responses of birds
-
Buescher EL, Scherer WF, Rosenberg MZ, Mc CH, (1959) Immunologic studies of Japanese encephalitis virus in Japan. III. Infection and antibody responses of birds. J Immunol 83: 605-613.
-
(1959)
J Immunol
, vol.83
, pp. 605-613
-
-
Buescher, E.L.1
Scherer, W.F.2
Rosenberg, M.Z.3
Mc, C.H.4
-
8
-
-
33751410326
-
Japanese B encephalitis virus in the blood of experimentally inoculated birds; epidemiological implications
-
Hammon WM, Reeves WC, Sather GE, (1951) Japanese B encephalitis virus in the blood of experimentally inoculated birds; epidemiological implications. Am J Hyg 53: 249-261.
-
(1951)
Am J Hyg
, vol.53
, pp. 249-261
-
-
Hammon, W.M.1
Reeves, W.C.2
Sather, G.E.3
-
9
-
-
0001219088
-
Japanese B encephalitis in American soldiers in Korea
-
Sabin AB, Schlesinger RW, et al. (1947) Japanese B encephalitis in American soldiers in Korea. Am J Hyg 46: 356-375.
-
(1947)
Am J Hyg
, vol.46
, pp. 356-375
-
-
Sabin, A.B.1
Schlesinger, R.W.2
-
10
-
-
0000797918
-
Ecologic studies of Japanese encephalitis virus in Japan. I. Introduction
-
Scherer WF, Buescher EL, (1959) Ecologic studies of Japanese encephalitis virus in Japan. I. Introduction. Am J Trop Med Hyg 8: 644-650.
-
(1959)
Am J Trop Med Hyg
, vol.8
, pp. 644-650
-
-
Scherer, W.F.1
Buescher, E.L.2
-
11
-
-
0000797917
-
Ecologic studies of Japanese encephalitis virus in Japan. III. Mosquito factors. Zootropism and vertical flight of Culex tritaeniorhynchus with observations on variations in collections from animal-baited traps in different habitats
-
Scherer WF, Buescher EL, Flemings MB, Noguchi A, Scanlon J, (1959) Ecologic studies of Japanese encephalitis virus in Japan. III. Mosquito factors. Zootropism and vertical flight of Culex tritaeniorhynchus with observations on variations in collections from animal-baited traps in different habitats. Am J Trop Med Hyg 8: 665-677.
-
(1959)
Am J Trop Med Hyg
, vol.8
, pp. 665-677
-
-
Scherer, W.F.1
Buescher, E.L.2
Flemings, M.B.3
Noguchi, A.4
Scanlon, J.5
-
12
-
-
0006203199
-
Ecologic studies of Japanese encephalitis virus in Japan. V. Avian factors
-
Scherer WF, Buescher EL, Mc CH, (1959) Ecologic studies of Japanese encephalitis virus in Japan. V. Avian factors. Am J Trop Med Hyg 8: 689-697.
-
(1959)
Am J Trop Med Hyg
, vol.8
, pp. 689-697
-
-
Scherer, W.F.1
Buescher, E.L.2
Mc, C.H.3
-
13
-
-
0027450456
-
Outbreak of Japanese encephalitis on the island of Saipan, 1990
-
Paul WS, Moore PS, Karabatsos N, Flood SP, Yamada S, et al. (1993) Outbreak of Japanese encephalitis on the island of Saipan, 1990. J Infection 167: 1053-1058.
-
(1993)
J Infection
, vol.167
, pp. 1053-1058
-
-
Paul, W.S.1
Moore, P.S.2
Karabatsos, N.3
Flood, S.P.4
Yamada, S.5
-
14
-
-
0027943353
-
Detection of west Nile and Japanese encephalitis viral genome sequences in cerebrospinal fluid from acute encephalitis cases in Karachi, Pakistan
-
Igarashi A, Tanaka M, Morita K, Takasu T, Ahmed A, et al. (1994) Detection of west Nile and Japanese encephalitis viral genome sequences in cerebrospinal fluid from acute encephalitis cases in Karachi, Pakistan. Microbiol Immunol 38: 827-830.
-
(1994)
Microbiol Immunol
, vol.38
, pp. 827-830
-
-
Igarashi, A.1
Tanaka, M.2
Morita, K.3
Takasu, T.4
Ahmed, A.5
-
15
-
-
0029797719
-
An outbreak of Japanese encephalitis in the Torres Strait, Australia, 1995
-
Hanna JN, Ritchie SA, Phillips DA, Shield J, Bailey MC, et al. (1996) An outbreak of Japanese encephalitis in the Torres Strait, Australia, 1995. Med J Aust 165: 256-260.
-
(1996)
Med J Aust
, vol.165
, pp. 256-260
-
-
Hanna, J.N.1
Ritchie, S.A.2
Phillips, D.A.3
Shield, J.4
Bailey, M.C.5
-
16
-
-
0002719618
-
Japanese encephalitis
-
In: Porterfield JS, editor. London, UK: Chapman & Hall
-
Innis BL (1995) Japanese encephalitis. In: Porterfield JS, editor. Exotic Viral Infections. London, UK: Chapman & Hall. pp. 147-174.
-
(1995)
Exotic Viral Infections
, pp. 147-174
-
-
Innis, B.L.1
-
17
-
-
80053498530
-
Estimated global incidence of Japanese encephalitis: a systematic review
-
Campbell GL, Hills SL, Fischer M, Jacobson JA, Hoke CH, et al. (2011) Estimated global incidence of Japanese encephalitis: a systematic review. Bull World Health Organ 89: 766-774E, 766-774, 774A-774E.
-
(2011)
Bull World Health Organ
, vol.89
, pp. 766-774
-
-
Campbell, G.L.1
Hills, S.L.2
Fischer, M.3
Jacobson, J.A.4
Hoke, C.H.5
-
18
-
-
0025116324
-
Flavivirus genome organization, expression, and replication
-
Chambers TJ, Hahn CS, Galler R, Rice CM, (1990) Flavivirus genome organization, expression, and replication. Annu Rev Microbiol 44: 649-688.
-
(1990)
Annu Rev Microbiol
, vol.44
, pp. 649-688
-
-
Chambers, T.J.1
Hahn, C.S.2
Galler, R.3
Rice, C.M.4
-
19
-
-
0029014434
-
The envelope glycoprotein from tick-borne encephalitis virus at 2 A resolution
-
Rey FA, Heinz FX, Mandl C, Kunz C, Harrison SC, (1995) The envelope glycoprotein from tick-borne encephalitis virus at 2 A resolution. Nature 375: 291-298.
-
(1995)
Nature
, vol.375
, pp. 291-298
-
-
Rey, F.A.1
Heinz, F.X.2
Mandl, C.3
Kunz, C.4
Harrison, S.C.5
-
20
-
-
0025609214
-
Genetic variation of Japanese encephalitis virus in nature
-
Chen WR, Tesh RB, Rico-Hesse R, (1990) Genetic variation of Japanese encephalitis virus in nature. J Gen Virol 71 (Pt 12) (): 2915-2922.
-
(1990)
J Gen Virol
, vol.71
, Issue.Pt 12
, pp. 2915-2922
-
-
Chen, W.R.1
Tesh, R.B.2
Rico-Hesse, R.3
-
21
-
-
0026651728
-
A new genotype of Japanese encephalitis virus from Indonesia
-
Chen WR, Rico-Hesse R, Tesh RB, (1992) A new genotype of Japanese encephalitis virus from Indonesia. Am J Trop Med Hyg 47: 61-69.
-
(1992)
Am J Trop Med Hyg
, vol.47
, pp. 61-69
-
-
Chen, W.R.1
Rico-Hesse, R.2
Tesh, R.B.3
-
22
-
-
33847625553
-
Molecular epidemiological analysis of Japanese encephalitis virus in China
-
Wang HY, Takasaki T, Fu SH, Sun XH, Zhang HL, et al. (2007) Molecular epidemiological analysis of Japanese encephalitis virus in China. J Gen Virol 88: 885-894.
-
(2007)
J Gen Virol
, vol.88
, pp. 885-894
-
-
Wang, H.Y.1
Takasaki, T.2
Fu, S.H.3
Sun, X.H.4
Zhang, H.L.5
-
23
-
-
55549146124
-
Change in Japanese encephalitis virus distribution, Thailand
-
Nitatpattana N, Dubot-Peres A, Gouilh MA, Souris M, Barbazan P, et al. (2008) Change in Japanese encephalitis virus distribution, Thailand. Emerg Infect Dis 14: 1762-1765.
-
(2008)
Emerg Infect Dis
, vol.14
, pp. 1762-1765
-
-
Nitatpattana, N.1
Dubot-Peres, A.2
Gouilh, M.A.3
Souris, M.4
Barbazan, P.5
-
24
-
-
0030425940
-
Envelope gene sequence variation among Japanese encephalitis viruses isolated in Korea
-
Nam JH, Chung YJ, Ban SJ, Kim EJ, Park YK, et al. (1996) Envelope gene sequence variation among Japanese encephalitis viruses isolated in Korea. Acta Virol 40: 303-309.
-
(1996)
Acta Virol
, vol.40
, pp. 303-309
-
-
Nam, J.H.1
Chung, Y.J.2
Ban, S.J.3
Kim, E.J.4
Park, Y.K.5
-
25
-
-
0141817696
-
Short report: a major genotype of Japanese encephalitis virus currently circulating in Japan
-
Ma SP, Yoshida Y, Makino Y, Tadano M, Ono T, et al. (2003) Short report: a major genotype of Japanese encephalitis virus currently circulating in Japan. Am J Trop Med Hyg 69: 151-154.
-
(2003)
Am J Trop Med Hyg
, vol.69
, pp. 151-154
-
-
Ma, S.P.1
Yoshida, Y.2
Makino, Y.3
Tadano, M.4
Ono, T.5
-
26
-
-
0030942441
-
Genotypes of Japanese encephalitis virus isolated in three states in Malaysia
-
Tsuchie H, Oda K, Vythilingam I, Thayan R, Vijayamalar B, et al. (1997) Genotypes of Japanese encephalitis virus isolated in three states in Malaysia. Am J Trop Med Hyg 56: 153-158.
-
(1997)
Am J Trop Med Hyg
, vol.56
, pp. 153-158
-
-
Tsuchie, H.1
Oda, K.2
Vythilingam, I.3
Thayan, R.4
Vijayamalar, B.5
-
27
-
-
2942661866
-
Shift in Japanese encephalitis virus (JEV) genotype circulating in northern Vietnam: Implications for frequent introductions of JEV from Southeast Asia to East Asia
-
Nga PT, del Carmen Parquet M, Cuong VD, Ma SP, Hasebe F, et al. (2004) Shift in Japanese encephalitis virus (JEV) genotype circulating in northern Vietnam: Implications for frequent introductions of JEV from Southeast Asia to East Asia. J Gen Virol 85: 1625-1631.
-
(2004)
J Gen Virol
, vol.85
, pp. 1625-1631
-
-
Nga, P.T.1
del Carmen Parquet, M.2
Cuong, V.D.3
Ma, S.P.4
Hasebe, F.5
-
28
-
-
79551625526
-
Introduction of Japanese encephalitis virus genotype I, India
-
Fulmali PV, Sapkal GN, Athawale S, Gore MM, Mishra AC, et al. (2011) Introduction of Japanese encephalitis virus genotype I, India. Emerg Infect Dis 17: 319-321.
-
(2011)
Emerg Infect Dis
, vol.17
, pp. 319-321
-
-
Fulmali, P.V.1
Sapkal, G.N.2
Athawale, S.3
Gore, M.M.4
Mishra, A.C.5
-
29
-
-
84930472379
-
Japanese encephalitis virus genotype replacement, Taiwan, 2009-2010
-
Chen YY, Fan YC, Tu WC, Chang RY, Shih CC, et al. (2011) Japanese encephalitis virus genotype replacement, Taiwan, 2009-2010. Emerg Infect Dis 17: 2354-2356.
-
(2011)
Emerg Infect Dis
, vol.17
, pp. 2354-2356
-
-
Chen, Y.Y.1
Fan, Y.C.2
Tu, W.C.3
Chang, R.Y.4
Shih, C.C.5
-
30
-
-
0034843633
-
Phylogenetic analysis of Japanese encephalitis virus: envelope gene based analysis reveals a fifth genotype, geographic clustering, and multiple introductions of the virus into the Indian subcontinent
-
Uchil PD, Satchidanandam V, (2001) Phylogenetic analysis of Japanese encephalitis virus: envelope gene based analysis reveals a fifth genotype, geographic clustering, and multiple introductions of the virus into the Indian subcontinent. Am J Trop Med Hyg 65: 242-251.
-
(2001)
Am J Trop Med Hyg
, vol.65
, pp. 242-251
-
-
Uchil, P.D.1
Satchidanandam, V.2
-
31
-
-
79960942589
-
Genotype v Japanese encephalitis virus is emerging
-
Li MH, Fu SH, Chen WX, Wang HY, Guo YH, et al. (2011) Genotype v Japanese encephalitis virus is emerging. PLoS Neglected Trop D 5: e1231.
-
(2011)
PLoS Neglected Trop D
, vol.5
-
-
Li, M.H.1
Fu, S.H.2
Chen, W.X.3
Wang, H.Y.4
Guo, Y.H.5
-
32
-
-
80053173339
-
Emergence of Japanese encephalitis virus genotype V in the Republic of Korea
-
Takhampunya R, Kim HC, Tippayachai B, Kengluecha A, Klein TA, et al. (2011) Emergence of Japanese encephalitis virus genotype V in the Republic of Korea. Virology J 8: 449.
-
(2011)
Virology J
, vol.8
, pp. 449
-
-
Takhampunya, R.1
Kim, H.C.2
Tippayachai, B.3
Kengluecha, A.4
Klein, T.A.5
-
33
-
-
79956325005
-
Molecular phylogenetic and evolutionary analyses of Muar strain of Japanese encephalitis virus reveal it is the missing fifth genotype
-
Mohammed MA, Galbraith SE, Radford AD, Dove W, Takasaki T, et al. (2011) Molecular phylogenetic and evolutionary analyses of Muar strain of Japanese encephalitis virus reveal it is the missing fifth genotype. Infect Genet Evol 11: 855-862.
-
(2011)
Infect Genet Evol
, vol.11
, pp. 855-862
-
-
Mohammed, M.A.1
Galbraith, S.E.2
Radford, A.D.3
Dove, W.4
Takasaki, T.5
-
34
-
-
0037372114
-
Origin and evolution of Japanese encephalitis virus in southeast Asia
-
Solomon T, Ni H, Beasley DW, Ekkelenkamp M, Cardosa MJ, et al. (2003) Origin and evolution of Japanese encephalitis virus in southeast Asia. J Virol 77: 3091-3098.
-
(2003)
J Virol
, vol.77
, pp. 3091-3098
-
-
Solomon, T.1
Ni, H.2
Beasley, D.W.3
Ekkelenkamp, M.4
Cardosa, M.J.5
-
35
-
-
80053981794
-
Emergence of genotype I of Japanese encephalitis virus as the dominant genotype in Asia
-
Pan XL, Liu H, Wang HY, Fu SH, Liu HZ, et al. (2011) Emergence of genotype I of Japanese encephalitis virus as the dominant genotype in Asia. J Virol 85: 9847-9853.
-
(2011)
J Virol
, vol.85
, pp. 9847-9853
-
-
Pan, X.L.1
Liu, H.2
Wang, H.Y.3
Fu, S.H.4
Liu, H.Z.5
-
36
-
-
0036147047
-
Rates of molecular evolution in RNA viruses: A quantitative phylogenetic analysis
-
Jenkins GM, Rambaut A, Pybus OG, Holmes EC, (2002) Rates of molecular evolution in RNA viruses: A quantitative phylogenetic analysis. J Mol Evol 54: 156-165.
-
(2002)
J Mol Evol
, vol.54
, pp. 156-165
-
-
Jenkins, G.M.1
Rambaut, A.2
Pybus, O.G.3
Holmes, E.C.4
-
37
-
-
77956812642
-
Yellow fever virus maintenance in Trinidad and its dispersal throughout the Americas
-
Auguste AJ, Lemey P, Pybus OG, Suchard MA, Alba Salas R, et al. (2010) Yellow fever virus maintenance in Trinidad and its dispersal throughout the Americas. J Virol 84: 9967-9977.
-
(2010)
J Virol
, vol.84
, pp. 9967-9977
-
-
Auguste, A.J.1
Lemey, P.2
Pybus, O.G.3
Suchard, M.A.4
Alba Salas, R.5
-
38
-
-
34249679636
-
Out of Africa: A molecular perspective on the introduction of yellow fever virus into the Americas
-
Bryant JE, Holmes EC, Barrett ADT, (2007) Out of Africa: A molecular perspective on the introduction of yellow fever virus into the Americas. PloS Pathogens 3: 0668-0673.
-
(2007)
PloS Pathogens
, vol.3
, pp. 0668-0673
-
-
Bryant, J.E.1
Holmes, E.C.2
Barrett, A.D.T.3
-
39
-
-
79951804708
-
Phylogeography of West Nile virus: from the cradle of evolution in Africa to Eurasia, Australia, and the Americas
-
May FJ, Davis CT, Tesh RB, Barrett ADT, (2011) Phylogeography of West Nile virus: from the cradle of evolution in Africa to Eurasia, Australia, and the Americas. J Virol 85: 2964-2974.
-
(2011)
J Virol
, vol.85
, pp. 2964-2974
-
-
May, F.J.1
Davis, C.T.2
Tesh, R.B.3
Barrett, A.D.T.4
-
40
-
-
73149120462
-
Genetic characterization of early isolates of Japanese encephalitis virus: genotype II has been circulating since at least 1951
-
Schuh AJ, Li L, Tesh RB, Innis BL, Barrett AD, (2010) Genetic characterization of early isolates of Japanese encephalitis virus: genotype II has been circulating since at least 1951. J Gen Virol 91: 95-102.
-
(2010)
J Gen Virol
, vol.91
, pp. 95-102
-
-
Schuh, A.J.1
Li, L.2
Tesh, R.B.3
Innis, B.L.4
Barrett, A.D.5
-
41
-
-
79951783216
-
Genetic characterization of Japanese encephalitis virus genotype II strains isolated from 1951 to 1978
-
Schuh AJ, Tesh RB, Barrett AD, (2011) Genetic characterization of Japanese encephalitis virus genotype II strains isolated from 1951 to 1978. J Gen Virol 92: 516-527.
-
(2011)
J Gen Virol
, vol.92
, pp. 516-527
-
-
Schuh, A.J.1
Tesh, R.B.2
Barrett, A.D.3
-
42
-
-
84879924104
-
Genetic diversity of Japanese encephalitis isolates obtained from the Indonesian archipelago between 1974 and 1987
-
Schuh AJ, Guzman H, Tesh RB, Barrett ADT, (2013) Genetic diversity of Japanese encephalitis isolates obtained from the Indonesian archipelago between 1974 and 1987. Vector Borne Zoonotic Dis 13: 479-88.
-
(2013)
Vector Borne Zoonotic Dis
, vol.13
, pp. 479-488
-
-
Schuh, A.J.1
Guzman, H.2
Tesh, R.B.3
Barrett, A.D.T.4
-
43
-
-
0033824415
-
RDP: detection of recombination amongst aligned sequences
-
Martin D, Rybicki E, (2000) RDP: detection of recombination amongst aligned sequences. Bioinformatics 16: 562-563.
-
(2000)
Bioinformatics
, vol.16
, pp. 562-563
-
-
Martin, D.1
Rybicki, E.2
-
44
-
-
0033590220
-
Possible emergence of new geminiviruses by frequent recombination
-
Padidam M, Sawyer S, Fauquet CM, (1999) Possible emergence of new geminiviruses by frequent recombination. Virology 265: 218-225.
-
(1999)
Virology
, vol.265
, pp. 218-225
-
-
Padidam, M.1
Sawyer, S.2
Fauquet, C.M.3
-
45
-
-
0035923699
-
Evaluation of methods for detecting recombination from DNA sequences: computer simulations
-
Posada D, Crandall KA, (2001) Evaluation of methods for detecting recombination from DNA sequences: computer simulations. Proc Natl Acad Sci USA 98: 13757-13762.
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 13757-13762
-
-
Posada, D.1
Crandall, K.A.2
-
46
-
-
0026708873
-
Analyzing the mosaic structure of genes
-
Smith JM, (1992) Analyzing the mosaic structure of genes. J Mol Evol 34: 126-129.
-
(1992)
J Mol Evol
, vol.34
, pp. 126-129
-
-
Smith, J.M.1
-
47
-
-
13144283628
-
A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints
-
Martin DP, Posada D, Crandall KA, Williamson C, (2005) A modified bootscan algorithm for automated identification of recombinant sequences and recombination breakpoints. AIDS Res Hum Retroviruses 21: 98-102.
-
(2005)
AIDS Res Hum Retroviruses
, vol.21
, pp. 98-102
-
-
Martin, D.P.1
Posada, D.2
Crandall, K.A.3
Williamson, C.4
-
48
-
-
13444251528
-
RDP2: recombination detection and analysis from sequence alignments
-
Martin DP, Williamson C, Posada D, (2005) RDP2: recombination detection and analysis from sequence alignments. Bioinformatics 21: 260-262.
-
(2005)
Bioinformatics
, vol.21
, pp. 260-262
-
-
Martin, D.P.1
Williamson, C.2
Posada, D.3
-
49
-
-
74549125386
-
SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building
-
Gouy M, Guindon S, Gascuel O, (2010) SeaView version 4: A multiplatform graphical user interface for sequence alignment and phylogenetic tree building. Mol Biol Evol 27: 221-224.
-
(2010)
Mol Biol Evol
, vol.27
, pp. 221-224
-
-
Gouy, M.1
Guindon, S.2
Gascuel, O.3
-
50
-
-
77950806408
-
New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0
-
Guindon S, Dufayard JF, Lefort V, Anisimova M, Hordijk W, et al. (2010) New Algorithms and Methods to Estimate Maximum-Likelihood Phylogenies: Assessing the Performance of PhyML 3.0. Syst Biol 59: 307-321.
-
(2010)
Syst Biol
, vol.59
, pp. 307-321
-
-
Guindon, S.1
Dufayard, J.F.2
Lefort, V.3
Anisimova, M.4
Hordijk, W.5
-
51
-
-
38649110663
-
BEAST: Bayesian evolutionary analysis by sampling trees
-
Drummond AJ, Rambaut A, (2007) BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 7: 214.
-
(2007)
BMC Evol Biol
, vol.7
, pp. 214
-
-
Drummond, A.J.1
Rambaut, A.2
-
52
-
-
28944450584
-
Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences
-
Shapiro B, Rambaut A, Drummond AJ, (2006) Choosing appropriate substitution models for the phylogenetic analysis of protein-coding sequences. Mol Biol Evol 23: 7-9.
-
(2006)
Mol Biol Evol
, vol.23
, pp. 7-9
-
-
Shapiro, B.1
Rambaut, A.2
Drummond, A.J.3
-
53
-
-
17744381574
-
Bayesian coalescent inference of past population dynamics from molecular sequences
-
Drummond AJ, Rambaut A, Shapiro B, Pybus OG, (2005) Bayesian coalescent inference of past population dynamics from molecular sequences. Mol Biol Evol 22: 1185-1192.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1185-1192
-
-
Drummond, A.J.1
Rambaut, A.2
Shapiro, B.3
Pybus, O.G.4
-
54
-
-
57649134005
-
Tracer version 1.4 [computer program]
-
Rambaut A, Drummond A, (2005) Tracer version 1.4 [computer program].
-
(2005)
-
-
Rambaut, A.1
Drummond, A.2
-
55
-
-
0034983646
-
Bayesian selection of continuous-time Markov chain evolutionary models
-
Suchard MA, Weiss RE, Sinsheimer JS, (2001) Bayesian selection of continuous-time Markov chain evolutionary models. Mol Biol Evol 18: 1001-1013.
-
(2001)
Mol Biol Evol
, vol.18
, pp. 1001-1013
-
-
Suchard, M.A.1
Weiss, R.E.2
Sinsheimer, J.S.3
-
56
-
-
84877663836
-
Accurate model selection of relaxed molecular clocks in bayesian phylogenetics
-
Baele G, Li WL, Drummond AJ, Suchard MA, Lemey P, (2013) Accurate model selection of relaxed molecular clocks in bayesian phylogenetics. Molecular biology and evolution 30: 239-243.
-
(2013)
Molecular Biology and Evolution
, vol.30
, pp. 239-243
-
-
Baele, G.1
Li, W.L.2
Drummond, A.J.3
Suchard, M.A.4
Lemey, P.5
-
58
-
-
70749083848
-
AIR: A batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses
-
Kumar S, Skjaeveland A, Orr RJ, Enger P, Ruden T, et al. (2009) AIR: A batch-oriented web program package for construction of supermatrices ready for phylogenomic analyses. BMC bioinformatics 10: 357.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 357
-
-
Kumar, S.1
Skjaeveland, A.2
Orr, R.J.3
Enger, P.4
Ruden, T.5
-
59
-
-
84950120929
-
FigTree version 1.1.2 [computer program]
-
Rambaut A, (2008) FigTree version 1.1.2 [computer program].
-
(2008)
-
-
Rambaut, A.1
-
60
-
-
37349019755
-
BOA: An R package for MCMC output convergence assessment and posterior inference
-
Smith BJ, (2007) BOA: An R package for MCMC output convergence assessment and posterior inference. J Stat Softw 21: 1-37.
-
(2007)
J Stat Softw
, vol.21
, pp. 1-37
-
-
Smith, B.J.1
-
61
-
-
24644465053
-
The R commander: A basic statistics graphical user interface to R
-
Fox J, (2005) The R commander: A basic statistics graphical user interface to R. J Stat Softw 14: 1-42.
-
(2005)
J Stat Softw
, vol.14
, pp. 1-42
-
-
Fox, J.1
-
62
-
-
42649136257
-
Correlating viral phenotypes with phylogeny: accounting for phylogenetic uncertainty
-
Parker J, Rambaut A, Pybus OG, (2008) Correlating viral phenotypes with phylogeny: accounting for phylogenetic uncertainty. Infection, genetics and evolution: journal of molecular epidemiology and evolutionary genetics in infectious diseases 8: 239-246.
-
(2008)
Infection, Genetics and Evolution: Journal of Molecular Epidemiology and Evolutionary Genetics in Infectious Diseases
, vol.8
, pp. 239-246
-
-
Parker, J.1
Rambaut, A.2
Pybus, O.G.3
-
63
-
-
17744396121
-
Not so different after all: a comparison of methods for detecting amino acid sites under selection
-
Kosakovsky Pond SL, Frost SD, (2005) Not so different after all: a comparison of methods for detecting amino acid sites under selection. Mol Biol Evol 22: 1208-1222.
-
(2005)
Mol Biol Evol
, vol.22
, pp. 1208-1222
-
-
Kosakovsky Pond, S.L.1
Frost, S.D.2
-
64
-
-
17744395033
-
Datamonkey: rapid detection of selective pressure on individual sites of codon alignments
-
Pond SL, Frost SD, (2005) Datamonkey: rapid detection of selective pressure on individual sites of codon alignments. Bioinformatics 21: 2531-2533.
-
(2005)
Bioinformatics
, vol.21
, pp. 2531-2533
-
-
Pond, S.L.1
Frost, S.D.2
-
65
-
-
49749094696
-
A maximum likelihood method for detecting directional evolution in protein sequences and its application to influenza A virus
-
Kosakovsky Pond SL, Poon AF, Leigh Brown AJ, Frost SD, (2008) A maximum likelihood method for detecting directional evolution in protein sequences and its application to influenza A virus. Mol Biol Evol 25: 1809-1824.
-
(2008)
Mol Biol Evol
, vol.25
, pp. 1809-1824
-
-
Kosakovsky Pond, S.L.1
Poon, A.F.2
Leigh Brown, A.J.3
Frost, S.D.4
-
66
-
-
15844406550
-
HyPhy: hypothesis testing using phylogenies
-
Pond SL, Frost SD, Muse SV, (2005) HyPhy: hypothesis testing using phylogenies. Bioinformatics 21: 676-679.
-
(2005)
Bioinformatics
, vol.21
, pp. 676-679
-
-
Pond, S.L.1
Frost, S.D.2
Muse, S.V.3
-
67
-
-
5344252994
-
Complete genome analysis and molecular characterization of Usutu virus that emerged in Austria in 2001: Comparison with the South African strain SAAR-1776 and other flaviviruses
-
Bakonyi T, Gould EA, Kolodziejek J, Weissenbock H, Nowotny N, (2004) Complete genome analysis and molecular characterization of Usutu virus that emerged in Austria in 2001: Comparison with the South African strain SAAR-1776 and other flaviviruses. Virology 328: 301-310.
-
(2004)
Virology
, vol.328
, pp. 301-310
-
-
Bakonyi, T.1
Gould, E.A.2
Kolodziejek, J.3
Weissenbock, H.4
Nowotny, N.5
-
68
-
-
0022522646
-
The natural history of Japanese encephalitis virus
-
Rosen L, (1986) The natural history of Japanese encephalitis virus. Annu Rev Microbiol 40: 395-414.
-
(1986)
Annu Rev Microbiol
, vol.40
, pp. 395-414
-
-
Rosen, L.1
-
69
-
-
67649222714
-
The transmission of Japanese B encephalitis by mosquitoes after experimental hibernation
-
Hurlbut HS, (1950) The transmission of Japanese B encephalitis by mosquitoes after experimental hibernation. Am J Hyg 51: 265-268.
-
(1950)
Am J Hyg
, vol.51
, pp. 265-268
-
-
Hurlbut, H.S.1
-
70
-
-
0018947324
-
Transovarial transmission of Japanese encephalitis virus by Culex tritaeniorhynchus mosquitoes
-
Rosen L, Shroyer DA, Lien JC, (1980) Transovarial transmission of Japanese encephalitis virus by Culex tritaeniorhynchus mosquitoes. Am J Trop Med Hyg 29: 711-712.
-
(1980)
Am J Trop Med Hyg
, vol.29
, pp. 711-712
-
-
Rosen, L.1
Shroyer, D.A.2
Lien, J.C.3
-
71
-
-
0024312179
-
Experimental vertical transmission of Japanese encephalitis virus by Culex tritaeniorhynchus and other mosquitoes
-
Rosen L, Lien JC, Shroyer DA, Baker RH, Lu LC, (1989) Experimental vertical transmission of Japanese encephalitis virus by Culex tritaeniorhynchus and other mosquitoes. Am J Trop Med Hyg 40: 548-556.
-
(1989)
Am J Trop Med Hyg
, vol.40
, pp. 548-556
-
-
Rosen, L.1
Lien, J.C.2
Shroyer, D.A.3
Baker, R.H.4
Lu, L.C.5
-
72
-
-
0020738933
-
Studies on Japanese encephalitis virus infection of reptiles. I. Experimental infection of snakes and lizards
-
Oya A, Doi R, Shirasaka A, Yabe S, Sasa M, (1983) Studies on Japanese encephalitis virus infection of reptiles. I. Experimental infection of snakes and lizards. Jpn J Exp Med 53: 117-123.
-
(1983)
Jpn J Exp Med
, vol.53
, pp. 117-123
-
-
Oya, A.1
Doi, R.2
Shirasaka, A.3
Yabe, S.4
Sasa, M.5
-
73
-
-
0014703142
-
Studies of arthropod-borne virus infections in chiroptera. VI. Isolation of Japanese B encephalitis virus from naturally infected bats
-
Sulkin SE, Allen R, Miura T, Toyokawa K, (1970) Studies of arthropod-borne virus infections in chiroptera. VI. Isolation of Japanese B encephalitis virus from naturally infected bats. Am J Trop Med Hyg 19: 77-87.
-
(1970)
Am J Trop Med Hyg
, vol.19
, pp. 77-87
-
-
Sulkin, S.E.1
Allen, R.2
Miura, T.3
Toyokawa, K.4
-
74
-
-
67449095937
-
Japanese encephalitis viruses from bats in Yunnan, China
-
Wang JL, Pan XL, Zhang HL, Fu SH, Wang HY, et al. (2009) Japanese encephalitis viruses from bats in Yunnan, China. Emerg Infect Dis 15: 939-942.
-
(2009)
Emerg Infect Dis
, vol.15
, pp. 939-942
-
-
Wang, J.L.1
Pan, X.L.2
Zhang, H.L.3
Fu, S.H.4
Wang, H.Y.5
-
75
-
-
0016023086
-
Virus infections in bats
-
Sulkin SE, Allen R, (1974) Virus infections in bats. Mg Virology 8: 1-103.
-
(1974)
Mg Virology
, vol.8
, pp. 1-103
-
-
Sulkin, S.E.1
Allen, R.2
-
77
-
-
79955765548
-
Japanese encephalitis, Tibet, China
-
Li YX, Li MH, Fu SH, Chen WX, Liu QY, et al. (2011) Japanese encephalitis, Tibet, China. Emerg Infect Dis 17: 934-936.
-
(2011)
Emerg Infect Dis
, vol.17
, pp. 934-936
-
-
Li, Y.X.1
Li, M.H.2
Fu, S.H.3
Chen, W.X.4
Liu, Q.Y.5
-
78
-
-
0021361932
-
Antigenic analysis of Japanese encephalitis virus by using monoclonal antibodies
-
Kobayashi Y, Hasegawa H, Oyama T, Tamai T, Kusaba T, (1984) Antigenic analysis of Japanese encephalitis virus by using monoclonal antibodies. Infect Immun 44: 117-123.
-
(1984)
Infect Immun
, vol.44
, pp. 117-123
-
-
Kobayashi, Y.1
Hasegawa, H.2
Oyama, T.3
Tamai, T.4
Kusaba, T.5
-
79
-
-
0033579282
-
Origin of the West Nile virus responsible for an outbreak of encephalitis in the northeastern United States
-
Lanciotti RS, Roehrig JT, Deubel V, Smith J, Parker M, et al. (1999) Origin of the West Nile virus responsible for an outbreak of encephalitis in the northeastern United States. Science 286: 2333-2337.
-
(1999)
Science
, vol.286
, pp. 2333-2337
-
-
Lanciotti, R.S.1
Roehrig, J.T.2
Deubel, V.3
Smith, J.4
Parker, M.5
-
80
-
-
0036314909
-
Emergence of Usutu virus, an African mosquito-borne flavivirus of the Japanese encephalitis virus group, central Europe
-
Weissenbock H, Kolodziejek J, Url A, Lussy H, Rebel-Bauder B, et al. (2002) Emergence of Usutu virus, an African mosquito-borne flavivirus of the Japanese encephalitis virus group, central Europe. Emerg Infect Dis 8: 652-656.
-
(2002)
Emerg Infect Dis
, vol.8
, pp. 652-656
-
-
Weissenbock, H.1
Kolodziejek, J.2
Url, A.3
Lussy, H.4
Rebel-Bauder, B.5
|