Inhibition of G-quadruplex assembling by DNA ligation: A versatile and non-covalent labeling strategy for bioanalysis

Biosensors and Bioelectronics

Volumn 51, Issue , 2014, Pages 336-342

  Ren, Jiangtao ^a,b   Wang, Jiahai ^a   Wang, Jin ^a,c   Wang, Erkang ^a  

^a CHANGCHUN INSTITUTE OF APPLIED CHEMISTRY   (China)

^b UNIVERSITY OF CHINESE ACADEMY OF SCIENCES   (China)

^c STATE UNIVERSITY OF NEW YORK   (United States)

Author keywords

DNA ligation; Fluorescent probe; G quadruplex; Non covalent labeling

Indexed keywords

COVALENT MODIFICATIONS; DNA LIGATION; FLUORESCENT PROBES; G-QUADRUPLEXES; MISMATCHED TEMPLATES; NON-COVALENT; NON-COVALENT COMPLEXES; SINGLE-NUCLEOTIDE POLYMORPHISMS;

COST BENEFIT ANALYSIS; COST EFFECTIVENESS; DNA; ESCHERICHIA COLI; FLUORESCENCE SPECTROSCOPY;

BIOMOLECULES;

ADENOSINE TRIPHOSPHATE; FLUORESCENT DYE; GUANINE QUADRUPLEX; NICOTINAMIDE ADENINE DINUCLEOTIDE; POLYDEOXYRIBONUCLEOTIDE SYNTHASE;

ARTICLE; BACTERIOPHAGE T4; BASE MISPAIRING; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; COST EFFECTIVENESS ANALYSIS; COVALENT BOND; DNA DETERMINATION; DNA LIGATION; DNA METABOLISM; DNA PROBE; DNA TEMPLATE; ESCHERICHIA COLI; GENETIC ANALYSIS; NONHUMAN; NUCLEOTIDE SEQUENCE; SINGLE NUCLEOTIDE POLYMORPHISM; VALIDATION STUDY;

DNA LIGATION; FLUORESCENT PROBE; G-QUADRUPLEX; NON-COVALENT LABELING;

ADENOSINE TRIPHOSPHATE; BACTERIOPHAGE T4; BIOSENSING TECHNIQUES; DNA; DNA LIGASES; ESCHERICHIA COLI; FLUORESCENT DYES; G-QUADRUPLEXES; NAD; POLYMORPHISM, SINGLE NUCLEOTIDE; SPECTROMETRY, FLUORESCENCE;

EID: 84883361898     PISSN: 09565663     EISSN: 18734235     Source Type: Journal    
DOI: 10.1016/j.bios.2013.07.059     Document Type: Article

References (41)

1. Burge S., Parkinson G.N., Hazel P., Todd A.K., Neidle S. Nucleic Acids Research 2006, 34:5402-5415.
2. Conze T., Shetye A., Tanaka Y., Gu J., Larsson C., Göransson J., Tavoosidana G., Söderberg O., Nilsson M., Landegren U. Annual Reviews of Analytical Chemistry 2009, 2:215-239.
3. Gourine A.V., Llaudet E., Dale N., Spyer K.M. Nature 2005, 436:108-111.
4. Guo S., Du Y., Yang X., Dong S., Wang E. Analytical Chemistry 2011, 83:8035-8040.
5. Harkness R.A., Saugstad O.D. Scandinavian Journal of Clinical and Laboratory Investigation 1997, 57:655-672.
6. He H.-Z., Pui-Yan Ma, V., Leung K.-H., Shiu-Hin Chan D., Yang H., Cheng Z., Leung C.-H., Ma D.-L. Analyst 2012, 137:1538-1540.
7. Hu J., Zhang C.-y. Analytical Chemistry 2010, 82:8991-8997.
8. Jhaveri S.D., Kirby R., Conrad R., Maglott E.J., Bowser M., Kennedy R.T., Glick G., Ellington A.D. Journal of the American Chemical Society 2000, 122:2469-2473.
9. Jia H., Li Z., Liu C., Cheng Y. Angewandte Chemie International Edition 2010, 49:5498-5501.
10. Kolpashchikov D.M. Journal of the American Chemical Society 2008, 130:2934-2935.
11. Lehnman I.R. Science 1974, 186:790-797.
12. Li T., Dong S., Wang E. Journal of the American Chemical Society 2010, 132:13156-13157.
13. Li T., Shi L., Wang E., Dong S. Chemistry-A European Journal 2009, 15:1036-1042.
14. Li T., Wang E., Dong S. Analytical Chemistry 2010, 82:1515-1520.
15. Lin S.-J., Guarente L. Current Opinion in Cell Biology 2003, 15:241-246.
16. Liu J.W., Cao Z.H., Lu Y. Chemical Reviews 2009, 109:1948-1998.
17. Lowry O.H., Passonneau J.V., Schulz D.W., Rock M.K. Journal of Biological Chemistry 1961, 236:2746-2755.
18. Lu C.-H., Li J., Lin M.-H., Wang Y.-W., Yang H.-H., Chen X., Chen G.-N. Angewandte Chemie International Edition 2010, 49:8454-8457.
19. Lu L.-M., Zhang X.-B., Kong R.-M., Yang B., Tan W. Journal of the American Chemical Society 2011, 133:11686-11691.
20. Ma C., Yang X., Wang K., Tang Z., Li W., Tan W., Lv X. Analytical Biochemistry 2008, 372:131-133.
21. Nakayama S., Sintim H.O. Journal of the American Chemical Society 2009, 131:10320-10333.
22. Phan A.T., Modi Y.S., Patel D.J. Journal of the American Chemical Society 2004, 126:8710-8716.
23. Ren J., Qin H., Wang J., Luedtke N., Wang E., Wang J. Analytical and Bioanalytical Chemistry 2011, 399:2763-2770.
24. Ren J., Wang J., Wang J., Luedtke N.W., Wang E. Biosensors and Bioelectronics 2012, 31:316-322.
25. Savas S., Liu G. Human Mutation 2009, 30:1369-1377.
26. Sitaula S., Branch S.D., Ali M.F. Chemical Communications 2012, 48:9284-9286.
27. Song J., Lv F., Yang G., Liu L., Yang Q., Wang S. Chemical Communications 2012, 48:7465-7467.
28. Song K., Kong X., Liu X., Zhang Y., Zeng Q., Tu L., Shi Z., Zhang H. Chemical Communications 2012, 48:1156-1158.
29. Tang Z., Liu P., Ma C., Yang X., Wang K., Tan W., Lv X. Analytical Chemistry 2011, 83:2505-2510.
30. Tang Z.W., Mallikaratchy P., Yang R.H., Kim Y.M., Zhu Z., Wang H., Tan W.H. Journal of the American Chemical Society 2008, 130:11268-11269.
31. Wang J., Wang L., Liu X., Liang Z., Song S., Li W., Li G., Fan C. Advanced Materials 2007, 19:3943-3946.
32. Wang Y., He X., Wang K., Ni X. Biosensors and Bioelectronics 2010, 25:2101-2106.
33. Wee E.J.H., Shiddiky M.J.A., Brown M.A., Trau M. Chemical Communications 2012, 48:12014-12016.
34. Xiao X., Song C., Zhang C., Su X., Zhao M. Chemical Communications 2012, 48:1964-1966.
35. Xu Z., Singh N.J., Lim J., Pan J., Kim H.N., Park S., Kim K.S., Yoon J. Journal of the American Chemical Society 2009, 131:15528-15533.
36. Xue X., Xu W., Wang F., Liu X. Journal of the American Chemical Society 2009, 131:11668-11669.
37. Yamada K., Hara N., Shibata T., Osago H., Tsuchiya M. Analytical Biochemistry 2006, 352:282-285.
38. Zhang Z., Sharon E., Freeman R., Liu X., Willner I. Analytical Chemistry 2012, 84:4789-4797.
39. Zhao Y., Qi L., Chen F., Dong Y., Kong Y., Wu Y., Fan C. Chemical Communications 2012, 48:3354-3356.
40. Zuo X., Xia F., Xiao Y., Plaxco K.W. Journal of the American Chemical Society 2010, 132:1816-1818.
41. Zyryanov G.V., Palacios M.A., Anzenbacher P. Angewandte Chemie International Edition 2007, 46:7849-7852.