메뉴 건너뛰기




Volumn 337, Issue , 2013, Pages 54-60

RRSM with a data-dependent threshold for miRNA target prediction

Author keywords

Correlation analysis; P value; Regression model; The relative R squared method

Indexed keywords

MICRORNA;

EID: 84883338971     PISSN: 00225193     EISSN: 10958541     Source Type: Journal    
DOI: 10.1016/j.jtbi.2013.08.002     Document Type: Article
Times cited : (4)

References (21)
  • 1
    • 4644309196 scopus 로고    scopus 로고
    • The functions of animal microRNAs
    • Ambros V. The functions of animal microRNAs. Nature 2004, 431:350-355.
    • (2004) Nature , vol.431 , pp. 350-355
    • Ambros, V.1
  • 2
    • 0347444723 scopus 로고    scopus 로고
    • MicroRNAs: genomics, biogenesis, mechanism, and function
    • Bartel D.P. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 2004, 116:281-297.
    • (2004) Cell , vol.116 , pp. 281-297
    • Bartel, D.P.1
  • 3
    • 78149259605 scopus 로고    scopus 로고
    • SylArray: a web server for automated detection of mirna effects from expression data
    • Bartonicek N., Enright A.J. SylArray: a web server for automated detection of mirna effects from expression data. Bioinformatics 2010, 26:2900-2901.
    • (2010) Bioinformatics , vol.26 , pp. 2900-2901
    • Bartonicek, N.1    Enright, A.J.2
  • 5
    • 0000633523 scopus 로고
    • Goodness of fit in generalized least squares estimation
    • Buse A. Goodness of fit in generalized least squares estimation. The American Statistician 1973, 27:106-108.
    • (1973) The American Statistician , vol.27 , pp. 106-108
    • Buse, A.1
  • 6
    • 0001608056 scopus 로고    scopus 로고
    • An R-squared measure of goodness of fit for dome common nonlinear regression models
    • Cameron A.C., Windmeijer F.A.G. An R-squared measure of goodness of fit for dome common nonlinear regression models. Journal of Econometrics 1997, 77:329-342.
    • (1997) Journal of Econometrics , vol.77 , pp. 329-342
    • Cameron, A.C.1    Windmeijer, F.A.G.2
  • 10
    • 80052165057 scopus 로고    scopus 로고
    • Human MicroRNA target identification by RRSM
    • Hsieh W.J., Wang H. Human MicroRNA target identification by RRSM. Journal of Theoretical Biology 2011, 286:79-84.
    • (2011) Journal of Theoretical Biology , vol.286 , pp. 79-84
    • Hsieh, W.J.1    Wang, H.2
  • 12
    • 34447288056 scopus 로고    scopus 로고
    • Bayesian inference of MicroRNA targets from sequence and expression data
    • Huang J.C., Morris Q.D., Frey B.J. Bayesian inference of MicroRNA targets from sequence and expression data. Journal of Computational Biology 2007, 14:550-563.
    • (2007) Journal of Computational Biology , vol.14 , pp. 550-563
    • Huang, J.C.1    Morris, Q.D.2    Frey, B.J.3
  • 14
    • 84875145131 scopus 로고    scopus 로고
    • Inferring microRNA-mRNA causal regulatory relationships from expression data
    • Le T.D., Liu L., Tsykin A., Goodall G.J., Liu B., Sun B.Y., Li J. Inferring microRNA-mRNA causal regulatory relationships from expression data. Bioinformatics 2013, 29:765-771.
    • (2013) Bioinformatics , vol.29 , pp. 765-771
    • Le, T.D.1    Liu, L.2    Tsykin, A.3    Goodall, G.J.4    Liu, B.5    Sun, B.Y.6    Li, J.7
  • 15
    • 11844278458 scopus 로고    scopus 로고
    • Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets
    • Lewis B.P., Burge C.B., Bartel D.P. Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets. Cell 2005, 120:15-20.
    • (2005) Cell , vol.120 , pp. 15-20
    • Lewis, B.P.1    Burge, C.B.2    Bartel, D.P.3
  • 16
    • 84868643706 scopus 로고    scopus 로고
    • Protein-specific scoring method for ligand discovery
    • Lu I.L., Wang H. Protein-specific scoring method for ligand discovery. Journal of Computational Biology 2012, 19:1215-1226.
    • (2012) Journal of Computational Biology , vol.19 , pp. 1215-1226
    • Lu, I.L.1    Wang, H.2
  • 19
    • 57049175013 scopus 로고    scopus 로고
    • Detecting MicroRNA binding and siRNA off-target effects from expression data
    • van Dongen S., Abreu-Goodger C., Enright A.J. Detecting MicroRNA binding and siRNA off-target effects from expression data. Nature Methods 2008, 5:1023-1025.
    • (2008) Nature Methods , vol.5 , pp. 1023-1025
    • van Dongen, S.1    Abreu-Goodger, C.2    Enright, A.J.3
  • 21
    • 80052037406 scopus 로고    scopus 로고
    • Yeast cell cycle transcription factors identification by variable selection criteria
    • Wang H., Wang Y.-H., Wu W.-S. Yeast cell cycle transcription factors identification by variable selection criteria. Gene 2011, 485:172-176.
    • (2011) Gene , vol.485 , pp. 172-176
    • Wang, H.1    Wang, Y.-H.2    Wu, W.-S.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.