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Volumn 117, Issue 33, 2013, Pages 9606-9614

Two-dimensional heterospectral correlation analysis of the redox-induced conformational transition in cytochrome c using surface-enhanced Raman and infrared absorption spectroscopies on a two-layer gold surface

Author keywords

[No Author keywords available]

Indexed keywords

CONFORMATIONAL TRANSITIONS; ELECTRON TRANSFER PROCESS; HETERO-SPECTRAL CORRELATION; INTRAMOLECULAR INTERACTIONS; MOLECULAR DYNAMICS CALCULATION; SURFACE ENHANCED RAMAN SPECTROSCOPY; SURFACE-ENHANCED INFRARED ABSORPTIONS; SURFACE-ENHANCED RAMAN;

EID: 84883186954     PISSN: 15206106     EISSN: 15205207     Source Type: Journal    
DOI: 10.1021/jp404573q     Document Type: Article
Times cited : (42)

References (37)
  • 1
    • 0033694734 scopus 로고    scopus 로고
    • Redox Reactions of Heme-Containing Metalloproteins: Dynamic Effects of Self-Assembled Monolayers on Thermodynamics and Kinetics of Cytochrome c Electron-Transfer Reactions
    • Fedurco, M. Redox Reactions of Heme-Containing Metalloproteins: Dynamic Effects of Self-Assembled Monolayers on Thermodynamics and Kinetics of Cytochrome c Electron-Transfer Reactions Coord. Chem. Rev. 2000, 209, 263-331
    • (2000) Coord. Chem. Rev. , vol.209 , pp. 263-331
    • Fedurco, M.1
  • 2
    • 0033523919 scopus 로고    scopus 로고
    • Natural Engineering Principles of Electron Tunnelling in Biological Oxidation-Reduction
    • Page, C. C.; Moser, C. C.; Chen, X.; Dutton, P. L. Natural Engineering Principles of Electron Tunnelling in Biological Oxidation-Reduction Nature 1999, 402, 47-52
    • (1999) Nature , vol.402 , pp. 47-52
    • Page, C.C.1    Moser, C.C.2    Chen, X.3    Dutton, P.L.4
  • 3
    • 0034599876 scopus 로고    scopus 로고
    • Integration of Layered Redox Proteins and Conductive Supports for Bioelectronic Applications
    • Willner, I.; Katz, E. Integration of Layered Redox Proteins and Conductive Supports for Bioelectronic Applications Angew. Chem., Int. Ed. 2000, 39, 1180-1218
    • (2000) Angew. Chem., Int. Ed. , vol.39 , pp. 1180-1218
    • Willner, I.1    Katz, E.2
  • 5
    • 0025007598 scopus 로고
    • High-Resolution Three-Dimensional Structure of Horse Heart Cytochrome c
    • Bushnell, G. W.; Louie, G. V.; Brayer, G. D. High-Resolution Three-Dimensional Structure of Horse Heart Cytochrome c J. Mol. Biol. 1990, 214, 585-595
    • (1990) J. Mol. Biol. , vol.214 , pp. 585-595
    • Bushnell, G.W.1    Louie, G.V.2    Brayer, G.D.3
  • 6
    • 0141570947 scopus 로고    scopus 로고
    • Coupling to Lysine-13 Promotes Electron Tunneling through Carboxylate-Terminated Alkanethiol Self-Assembled Monolayers to Cytochrome c
    • Niki, K.; Hardy, W. R.; Hill, M. G.; Li, H.; Sprinkle, J. R.; Margoliash, E.; Fujita, K.; Tanimura, R.; Nakamura, N.; Ohno, H. Coupling to Lysine-13 Promotes Electron Tunneling through Carboxylate-Terminated Alkanethiol Self-Assembled Monolayers to Cytochrome c J. Phys. Chem. B 2003, 107, 9947-9949
    • (2003) J. Phys. Chem. B , vol.107 , pp. 9947-9949
    • Niki, K.1    Hardy, W.R.2    Hill, M.G.3    Li, H.4    Sprinkle, J.R.5    Margoliash, E.6    Fujita, K.7    Tanimura, R.8    Nakamura, N.9    Ohno, H.10
  • 7
    • 0001119691 scopus 로고    scopus 로고
    • An Electrochemical Approach to Investigate Gated Electron Transfer Using a Physiological Model System: Cytochrome c Immobilized on Carboxylic Acid-Terminated Alkanethiol Self-Assembled Monolayers on Gold Electrodes
    • Avila, A.; Gregory, B. W.; Niki, K.; Cotton, T. M. An Electrochemical Approach to Investigate Gated Electron Transfer Using a Physiological Model System: Cytochrome c Immobilized on Carboxylic Acid-Terminated Alkanethiol Self-Assembled Monolayers on Gold Electrodes J. Phys. Chem. B 2000, 104, 2759-2766
    • (2000) J. Phys. Chem. B , vol.104 , pp. 2759-2766
    • Avila, A.1    Gregory, B.W.2    Niki, K.3    Cotton, T.M.4
  • 8
    • 33748608019 scopus 로고    scopus 로고
    • Long-Range Electron-Transfer Reaction Rates to Cytochrome c Across Long- and Short-Chain Alkanethiol Self-Assembled Monolayers: Electroreflectance Studies
    • Feng, Z. Q.; Imabayashi, S.; Kakiuchi, T.; Niki, K. Long-Range Electron-Transfer Reaction Rates to Cytochrome c Across Long- and Short-Chain Alkanethiol Self-Assembled Monolayers: Electroreflectance Studies J. Chem. Soc., Faraday Trans. 1997, 93, 1367-1370
    • (1997) J. Chem. Soc., Faraday Trans. , vol.93 , pp. 1367-1370
    • Feng, Z.Q.1    Imabayashi, S.2    Kakiuchi, T.3    Niki, K.4
  • 9
    • 1842365512 scopus 로고    scopus 로고
    • Molecular Orientation Distributions in Protein Films. 1. Cytochrome c Adsorbed to Substrates of Variable Surface Chemistry
    • Edmiston, P. L.; Lee, J. E.; Cheng, S.-S.; Saavedra, S. S. Molecular Orientation Distributions in Protein Films. 1. Cytochrome c Adsorbed to Substrates of Variable Surface Chemistry J. Am. Chem. Soc. 1997, 119, 560-570
    • (1997) J. Am. Chem. Soc. , vol.119 , pp. 560-570
    • Edmiston, P.L.1    Lee, J.E.2    Cheng, S.-S.3    Saavedra, S.S.4
  • 10
    • 0034250113 scopus 로고    scopus 로고
    • Protein Adsorption at Interfaces Detected by Second Harmonic Generation
    • Salafsky, J. S.; Eisenthal, K. B. Protein Adsorption at Interfaces Detected by Second Harmonic Generation J. Phys. Chem. B 2000, 104, 7752-7755
    • (2000) J. Phys. Chem. B , vol.104 , pp. 7752-7755
    • Salafsky, J.S.1    Eisenthal, K.B.2
  • 11
    • 84880780418 scopus 로고    scopus 로고
    • Electrochemistry, Surface Plasmon Resonance, and Quartz Crystal Microbalance: An Associative Study on Cytochrome c Adsorption on Pyridine Tail-Group Monolayers on Gold
    • Paulo, T. d. F.; de Sousa, T. P.; de Abreu, D. S.; Felício, N. H.; Bernhardt, P. V.; de F. Lopes, L. G.; Sousa, E. H. S.; Diógenes, I. C. N. Electrochemistry, Surface Plasmon Resonance, and Quartz Crystal Microbalance: An Associative Study on Cytochrome c Adsorption on Pyridine Tail-Group Monolayers on Gold J. Phys. Chem. B 2013, 117, 8673-8680
    • (2013) J. Phys. Chem. B , vol.117 , pp. 8673-8680
    • Paulo D. T, F.1    De Sousa, T.P.2    De Abreu, D.S.3    Felício, N.H.4    Bernhardt, P.V.5    De F. Lopes, L.G.6    Sousa, E.H.S.7    Diógenes, I.C.N.8
  • 12
    • 3342875501 scopus 로고    scopus 로고
    • Functional Vibrational Spectroscopy of a Cytochrome c Monolayer: SEIDAS Probes the Interaction with Different Surface-Modified Electrodes
    • Ataka, K.; Heberle, J. Functional Vibrational Spectroscopy of a Cytochrome c Monolayer: SEIDAS Probes the Interaction with Different Surface-Modified Electrodes J. Am. Chem. Soc. 2004, 126, 9445-9457
    • (2004) J. Am. Chem. Soc. , vol.126 , pp. 9445-9457
    • Ataka, K.1    Heberle, J.2
  • 13
    • 0027818118 scopus 로고
    • Complete Assignment of Cytochrome c Resonance Raman Spectra Via Enzymic Reconstitution with Isotopically Labeled Hemes
    • Hu, S.; Morris, I. K.; Singh, J. P.; Smith, K. M.; Spiro, T. G. Complete Assignment of Cytochrome c Resonance Raman Spectra Via Enzymic Reconstitution with Isotopically Labeled Hemes J. Am. Chem. Soc. 1993, 115, 12446-12458
    • (1993) J. Am. Chem. Soc. , vol.115 , pp. 12446-12458
    • Hu, S.1    Morris, I.K.2    Singh, J.P.3    Smith, K.M.4    Spiro, T.G.5
  • 14
    • 0038096324 scopus 로고
    • Two-Dimensional Infrared Spectroscopy
    • Noda, I. Two-Dimensional Infrared Spectroscopy J. Am. Chem. Soc. 1989, 111, 8116-8118
    • (1989) J. Am. Chem. Soc. , vol.111 , pp. 8116-8118
    • Noda, I.1
  • 15
    • 0025434356 scopus 로고
    • Two-Dimensional Infrared (2D IR) Spectroscopy: Theory and Applications
    • Noda, I. Two-Dimensional Infrared (2D IR) Spectroscopy: Theory and Applications Appl. Spectrosc. 1990, 44, 550-561
    • (1990) Appl. Spectrosc. , vol.44 , pp. 550-561
    • Noda, I.1
  • 16
    • 33745563365 scopus 로고
    • Generalized Two-Dimensional Correlation Method Applicable to Infrared, Raman, and Other Types of Spectroscopy
    • Noda, I. Generalized Two-Dimensional Correlation Method Applicable to Infrared, Raman, and Other Types of Spectroscopy Appl. Spectrosc. 1993, 47, 1329-1336
    • (1993) Appl. Spectrosc. , vol.47 , pp. 1329-1336
    • Noda, I.1
  • 17
    • 77954219098 scopus 로고    scopus 로고
    • Two-Dimensional Correlation Spectroscopy - Biannual Survey 2007-2009
    • Noda, I. Two-Dimensional Correlation Spectroscopy-Biannual Survey 2007-2009 J. Mol. Struct. 2010, 974, 3-24
    • (2010) J. Mol. Struct. , vol.974 , pp. 3-24
    • Noda, I.1
  • 18
    • 44749088928 scopus 로고    scopus 로고
    • A Principal Component Analysis and Two-Dimensional Correlation Infrared Spectroscopy Study on the Thermal Unfolding of Ribonuclease A under Reducing Conditions
    • Wang, L.-X.; Meersman, F.; Wu, Y. A Principal Component Analysis and Two-Dimensional Correlation Infrared Spectroscopy Study on the Thermal Unfolding of Ribonuclease A under Reducing Conditions J. Mol. Struct. 2008, 883-884, 79-84
    • (2008) J. Mol. Struct. , vol.883-884 , pp. 79-84
    • Wang, L.-X.1    Meersman, F.2    Wu, Y.3
  • 19
    • 67649172572 scopus 로고    scopus 로고
    • Raman Imaging Analysis of Pharmaceutical Tablets by Two-Dimensional (2D) Correlation Spectroscopy
    • Shinzawa, H.; Awa, K.; Okumura, T.; Morita, S.-i.; Otsuka, M.; Ozaki, Y.; Sato, H. Raman Imaging Analysis of Pharmaceutical Tablets by Two-Dimensional (2D) Correlation Spectroscopy Vib. Spectrosc. 2009, 51, 125-131
    • (2009) Vib. Spectrosc. , vol.51 , pp. 125-131
    • Shinzawa, H.1    Awa, K.2    Okumura, T.3    Morita, S.-I.4    Otsuka, M.5    Ozaki, Y.6    Sato, H.7
  • 20
    • 0346004224 scopus 로고    scopus 로고
    • Two-Dimensional Correlation Spectroscopy Study of Temperature-Dependent Spectral Variations of N -Methylacetamide in the Pure Liquid State. 2. Two-Dimensional Raman and Infrared-Raman Heterospectral Analysis
    • Noda, I.; Liu, Y.; Ozaki, Y. Two-Dimensional Correlation Spectroscopy Study of Temperature-Dependent Spectral Variations of N -Methylacetamide in the Pure Liquid State. 2. Two-Dimensional Raman and Infrared-Raman Heterospectral Analysis J. Phys. Chem. 1996, 100, 8674-8680
    • (1996) J. Phys. Chem. , vol.100 , pp. 8674-8680
    • Noda, I.1    Liu, Y.2    Ozaki, Y.3
  • 21
    • 77953766271 scopus 로고    scopus 로고
    • A Two-Layer Gold Surface with Improved Surface Enhancement for Spectro-Electrochemistry Using Surface-Enhanced Infrared Absorption Spectroscopy
    • Nowak, C.; Luening, C.; Knoll, W.; Naumann, R. L. C. A Two-Layer Gold Surface with Improved Surface Enhancement for Spectro-Electrochemistry Using Surface-Enhanced Infrared Absorption Spectroscopy Appl. Spectrosc. 2009, 63, 1068-1074
    • (2009) Appl. Spectrosc. , vol.63 , pp. 1068-1074
    • Nowak, C.1    Luening, C.2    Knoll, W.3    Naumann, R.L.C.4
  • 22
    • 84856215641 scopus 로고    scopus 로고
    • Architecture, Implementation and Parallelisation of the GROMOS Software for Biomolecular Simulation
    • Schmid, N.; Christ, C. D.; Christen, M.; Eichenberger, A. P.; van Gunsteren, W. F. Architecture, Implementation and Parallelisation of the GROMOS Software for Biomolecular Simulation Comput. Phys. Commun. 2012, 183, 890-903
    • (2012) Comput. Phys. Commun. , vol.183 , pp. 890-903
    • Schmid, N.1    Christ, C.D.2    Christen, M.3    Eichenberger, A.P.4    Van Gunsteren, W.F.5
  • 26
    • 79959195027 scopus 로고    scopus 로고
    • 2D-SEIRAS Spectroscopy to Highlight Conformational Changes of the Cytochrome c Oxidase Induced by Direct Electron Transfer
    • Nowak, C.; Laredo, T.; Gebert, J.; Lipkowski, J.; Gennis, R. B.; Ferguson-Miller, S.; Knoll, W.; Naumann, R. L. C. 2D-SEIRAS Spectroscopy to Highlight Conformational Changes of the Cytochrome c Oxidase Induced by Direct Electron Transfer Metallomics 2011, 3, 619-627
    • (2011) Metallomics , vol.3 , pp. 619-627
    • Nowak, C.1    Laredo, T.2    Gebert, J.3    Lipkowski, J.4    Gennis, R.B.5    Ferguson-Miller, S.6    Knoll, W.7    Naumann, R.L.C.8
  • 27
    • 65249098404 scopus 로고    scopus 로고
    • Electron Transfer Kinetics of Cytochrome c in the Submillisecond Time Regime Using Time-Resolved Surface-Enhanced Infrared Absorption Spectroscopy
    • Nowak, C.; Luening, C.; Schach, D.; Baurecht, D.; Knoll, W.; Naumann, R. L. C. Electron Transfer Kinetics of Cytochrome c in the Submillisecond Time Regime Using Time-Resolved Surface-Enhanced Infrared Absorption Spectroscopy J. Phys. Chem. C 2009, 113, 2256-2262
    • (2009) J. Phys. Chem. C , vol.113 , pp. 2256-2262
    • Nowak, C.1    Luening, C.2    Schach, D.3    Baurecht, D.4    Knoll, W.5    Naumann, R.L.C.6
  • 28
    • 0026529046 scopus 로고
    • Redox-Dependent Changes in β-Extended Chain and Turn Structures of Cytochrome c in Water Solution Determined by Second Derivative Amide i Infrared Spectra
    • Dong, A.; Huang, P.; Caughey, W. S. Redox-Dependent Changes in β-Extended Chain and Turn Structures of Cytochrome c in Water Solution Determined by Second Derivative Amide I Infrared Spectra Biochemistry 1992, 31, 182-189
    • (1992) Biochemistry , vol.31 , pp. 182-189
    • Dong, A.1    Huang, P.2    Caughey, W.S.3
  • 29
    • 0027492164 scopus 로고
    • Determination of Protein Secondary Structure by Fourier Transform Infrared Spectroscopy: A Critical Assessment
    • Surewicz, W. K.; Mantsch, H. H.; Chapman, D. Determination of Protein Secondary Structure by Fourier Transform Infrared Spectroscopy: A Critical Assessment Biochemistry 1993, 32, 389-394
    • (1993) Biochemistry , vol.32 , pp. 389-394
    • Surewicz, W.K.1    Mantsch, H.H.2    Chapman, D.3
  • 30
    • 0019888623 scopus 로고
    • Conformation Change of Cytochrome c: I. Ferrocytochrome c Structure Refined at 1.5 Å Resolution
    • Takano, T.; Dickerson, R. E. Conformation Change of Cytochrome c: I. Ferrocytochrome c Structure Refined at 1.5 Å Resolution J. Mol. Biol. 1981, 153, 79-94
    • (1981) J. Mol. Biol. , vol.153 , pp. 79-94
    • Takano, T.1    Dickerson, R.E.2
  • 31
    • 0025115245 scopus 로고
    • Redox-Linked Conformational Changes in Proteins Detected by a Combination of Infrared Spectroscopy and Protein Electrochemistry
    • Moss, D.; Nabedryk, E.; Breton, J.; Mäntele, W. Redox-Linked Conformational Changes in Proteins Detected by a Combination of Infrared Spectroscopy and Protein Electrochemistry Eur. J. Biochem. 1990, 187, 565-572
    • (1990) Eur. J. Biochem. , vol.187 , pp. 565-572
    • Moss, D.1    Nabedryk, E.2    Breton, J.3    Mäntele, W.4
  • 34
    • 78049281431 scopus 로고    scopus 로고
    • Molecular Dynamics Simulations of Cytochrome c Unfolding in AOT Reverse Micelles: The First Steps
    • Abel, S.; Waks, M.; Marchi, M. Molecular Dynamics Simulations of Cytochrome c Unfolding in AOT Reverse Micelles: The First Steps Eur. Phys. J. E: Soft Matter Biol. Phys. 2010, 32, 399-409
    • (2010) Eur. Phys. J. E: Soft Matter Biol. Phys. , vol.32 , pp. 399-409
    • Abel, S.1    Waks, M.2    Marchi, M.3
  • 35
    • 0019888571 scopus 로고
    • Conformation Change of Cytochrome c: II. Ferricytochrome c Refinement at 1.8 Å and Comparison with the Ferrocytochrome Structure
    • Takano, T.; Dickerson, R. E. Conformation Change of Cytochrome c: II. Ferricytochrome c Refinement at 1.8 Å and Comparison with the Ferrocytochrome Structure J. Mol. Biol. 1981, 153, 95-115
    • (1981) J. Mol. Biol. , vol.153 , pp. 95-115
    • Takano, T.1    Dickerson, R.E.2
  • 36
    • 20644453308 scopus 로고    scopus 로고
    • Two-Dimensional Infrared, Two-Dimensional Raman, and Two-Dimensional Infrared and Raman Heterospectral Correlation Studies of Secondary Structure of β-Lactoglobulin in Buffer Solutions
    • Jung, Y. M.; Czarnik-Matusewicz, B.; Ozaki, Y. Two-Dimensional Infrared, Two-Dimensional Raman, and Two-Dimensional Infrared and Raman Heterospectral Correlation Studies of Secondary Structure of β-Lactoglobulin in Buffer Solutions J. Phys. Chem. B 2000, 104, 7812-7817
    • (2000) J. Phys. Chem. B , vol.104 , pp. 7812-7817
    • Jung, Y.M.1    Czarnik-Matusewicz, B.2    Ozaki, Y.3
  • 37
    • 0025234717 scopus 로고
    • Redox-Dependent Structure Change and Hyperfine Nuclear Magnetic Resonance Shifts in Cytochrome c
    • Feng, Y.; Roder, H.; Englander, S. W. Redox-Dependent Structure Change and Hyperfine Nuclear Magnetic Resonance Shifts in Cytochrome c Biochemistry 1990, 29, 3494-3504
    • (1990) Biochemistry , vol.29 , pp. 3494-3504
    • Feng, Y.1    Roder, H.2    Englander, S.W.3


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