A hybrid visualization system for molecular models

Proceedings - Web3D 2013: 18th International Conference on 3D Web Technology

Volumn , Issue , 2013, Pages 117-120

  Marion, Charles ^a   Pouderoux, Joachim ^a   Jomier, Julien ^a   Jourdain, Sebastien ^b   Hanwell, Marcus ^b   Ayachit, Utkarsh ^b  

^a UPMC Univ Paris 06   (France)

^b KITWARE INC   (United States)

Author keywords

Molecule; Remote rendering; WebGL; WebSocket

Indexed keywords

HYBRID ARCHITECTURES; INNOVATIVE TECHNOLOGY; REMOTE RENDERING; TECHNICAL LIMITATIONS; VISUALIZATION CLUSTERS; VISUALIZATION SYSTEM; WEBGL; WEBSOCKET;

MOLECULES; THREE DIMENSIONAL; VISUALIZATION; WEB BROWSERS; WORLD WIDE WEB;

THREE DIMENSIONAL COMPUTER GRAPHICS;

EID: 84883085209     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: 10.1145/2466533.2466558     Document Type: Conference Paper

References (11)

1. BARTESAGHI, A., LECUMBERRY, F., SAPIRO, G., AND SUBRAMANIAN, S. 2012. Protein secondary structure determination by constrained single-particle cryo-electron tomography. Structure 20, 12 (dec), 2003-2013.
2. CHAVENT, M., LÉVY, B., KRONE, M., BIDMON, K., NOMINÉ, J.-P., ERTL, T., AND BAADEN, M. 2011. GPU-Powered Tools Boost Molecular Visualization. Briefings in Bioinformatics 12, 6 (Nov.).
3. CHEN, S. S., AND WILLIAMSON, J. R. 2013. Characterization of the ribosome biogenesis landscape in e. coli using quantitative mass spectrometry. Journal of Molecular Biology 425, 4, 767 - 779.
4. DUPONT, F., DUVAL, T., FLEURY, C., FOREST, J., GOURANTON, V., LANDO, P., LAURENT, T., LAVOÚE, G., AND SCHMUTZ, A. 2010. Collaborative Scientific Visualization: The COLLAVIZ Framework. In JVRC 2010 (2010 Joint Virtual Reality Conference of EuroVR - EGVE - VEC).
5. HANWELL, M., CURTIS, D., LONIE, D., VANDERMEERSCH, T., ZUREK, E., AND HUTCHISON, G. 2012. Avogadro: An advanced semantic chemical editor, visualization, and analysis platform. Journal of Cheminformatics 4, 17 (08).
6. JOMIER, J., JOURDAIN, S., AYACHIT, U., AND MARION, C. 2011. Remote visualization of large datasets with MIDAS and ParaViewWeb. In Proceedings of the 16th International Conference on 3D Web Technology, ACM, Web3D '11, 147-150.
7. JOURDAIN, S., FOREST, J., MOUTON, C., NOUAILHAS, B., MONIOT, G., KOLB, F., CHABRIDON, S., SIMATIC, M., ABID, Z., AND MALLET, L. 2008. ShareX3D, a scientific collaborative 3D viewer over HTTP. In Proceedings of the 13th international symposium on 3D web technology, ACM, Web3D '08, 35-41.
8. JOURDAIN, S., AYACHIT, U., AND GEVECI, B. 2010. ParaViewWeb, a web framework for 3D visualization and data processing. In IADIS International Conference on Web Virtual Reality and Three-Dimensional Worlds, vol. 7.
9. O'DONOGHUE, S. I., GOODSELL, D. S., FRANGAKIS, A. S., JOSSINET, F., LASKOWSKI, R. A., NILGES, M., SAIBIL, H. R., SCHAFFERHANS, A., WADE, R. C., WESTHOF, E., AND OLSON, A. J. 2010. Visualization of Macromolecular Structures. Nature Methods 7 (Mar.), S42-S55.
10. SCHROEDER, W., MARTIN, K., AND LORENSEN, B. 2006. The Visualization Toolkit: an Object-Oriented Approach to 3D Graphics. Kitware.
11. TARINI, M., CIGNONI, P., AND MONTANI, C. 2006. Ambient Occlusion and Edge Cueing for Enhancing Real Time Molecular Visualization. IEEE Transactions on Visualization and Computer Graphics 12, 5, 1237-1244.