The complete chloroplast genome sequence of Mahonia bealei (Berberidaceae) reveals a significant expansion of the inverted repeat and phylogenetic relationship with other angiosperms

Gene

Volumn 528, Issue 2, 2013, Pages 120-131

  Ma, Ji ^a   Yang, Bingxian ^a   Zhu, Wei ^a   Sun, Lianli ^a   Tian, Jingkui ^a   Wang, Xumin ^b  

^a ZHEJIANG UNIVERSITY   (China)

^b Chinese Academy of Sciences   (China)

Author keywords

Chloroplast; IR expansion; Mahonia bealei; Molecular dating; RNA editing; SSRs

Indexed keywords

BERBERINE; CHLOROPLAST DNA; HYPOCHOLESTEROLEMIC AGENT; PROTEIN; RIBOSOME RNA; TRANSFER RNA;

AMINO ACID SEQUENCE; ANGIOSPERM; ANTIDIABETIC ACTIVITY; ANTIINFLAMMATORY ACTIVITY; ARTICLE; BERBERIDACEAE; CHLOROPLAST GENOME; COMPARATIVE STUDY; DNA BASE COMPOSITION; DOUBLE STRANDED DNA BREAK; GENE CONVERSION; GENE LOSS; GENE ORDER; GENE SEQUENCE; GENOME ANALYSIS; GENOMIC INSTABILITY; INVERTED REPEAT; MAHONIA; MAXIMUM LIKELIHOOD METHOD; MEDICINAL PLANT; NONHUMAN; NUCLEOTIDE SEQUENCE; PARSIMONY ANALYSIS; PHYLOGENY; PLASTID GENOME; PRIORITY JOURNAL; RANUNCULACEAE; RANUNCULALES; RNA EDITING; SIMPLE SEQUENCE REPEAT;

CHLOROPLAST; CHLOROPLAST DNA; CP; CPDNA; IGS; INDEL; INSERTION/DELETION; INTERGENIC SPACER; INVERTED REPEAT; IR; IR EXPANSION; LARGE SINGLE-COPY REGION; LSC; MAHONIA BEALEI; MOLECULAR DATING; RNA EDITING; SINGLE-COPY REGION; SSC; SSRS;

BASE SEQUENCE; CODON; DNA REPEAT EXPANSION; EVOLUTION, MOLECULAR; EXPRESSED SEQUENCE TAGS; GENES, PLANT; GENETIC SPECIATION; GENOME, CHLOROPLAST; INVERTED REPEAT SEQUENCES; LIKELIHOOD FUNCTIONS; MAHONIA; MODELS, GENETIC; MOLECULAR SEQUENCE ANNOTATION; PHYLOGENY; POLYMORPHISM, GENETIC; RNA EDITING; SEQUENCE ANALYSIS, DNA;

BERBERIDACEAE; MAGNOLIOPHYTA; MAHONIA; MAHONIA BEALEI; MYA; RANUNCULACEAE;

EID: 84883053139     PISSN: 03781119     EISSN: 18790038     Source Type: Journal    
DOI: 10.1016/j.gene.2013.07.037     Document Type: Article

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