메뉴 건너뛰기




Volumn 425, Issue , 2013, Pages 169-175

Extraction and processing of circulating DNA from large sample volumes using methylation on beads for the detection of rare epigenetic events

Author keywords

Blood processing protocols; Cancer epigenetics; Circulating DNA; DNA methylation; Methylation specific PCR; Quantification

Indexed keywords

ALCOHOL; APC PROTEIN; CHLOROFORM; DNA; GENOMIC DNA; PHENOL; RAS ASSOCIATION DOMAIN FAMILY PROTEIN 1A;

EID: 84883029814     PISSN: 00098981     EISSN: 18733492     Source Type: Journal    
DOI: 10.1016/j.cca.2013.07.023     Document Type: Article
Times cited : (47)

References (26)
  • 1
    • 84957852098 scopus 로고
    • Les Acides Nucleiques du Plasma Sanguin Chez L'Homme
    • Mandel P., Metais P. Les Acides Nucleiques du Plasma Sanguin Chez L'Homme. C R Seances Soc Biol Fil 1948, 142:241-243.
    • (1948) C R Seances Soc Biol Fil , vol.142 , pp. 241-243
    • Mandel, P.1    Metais, P.2
  • 2
    • 77956467360 scopus 로고    scopus 로고
    • Cell-free DNA in the blood as a solid tumor biomarker-a critical appraisal of the literature
    • Jung K., Fleischhacker M., Rabien A. Cell-free DNA in the blood as a solid tumor biomarker-a critical appraisal of the literature. Clin Chim Acta 2010, 411:1611-1624.
    • (2010) Clin Chim Acta , vol.411 , pp. 1611-1624
    • Jung, K.1    Fleischhacker, M.2    Rabien, A.3
  • 3
    • 79957458567 scopus 로고    scopus 로고
    • Cell-free nucleic acids as biomarkers in cancer patients
    • Schwarzenbach H., Hoon D.S.B., Pantel K. Cell-free nucleic acids as biomarkers in cancer patients. Nat Rev Cancer 2011, 11:426-437.
    • (2011) Nat Rev Cancer , vol.11 , pp. 426-437
    • Schwarzenbach, H.1    Hoon, D.S.B.2    Pantel, K.3
  • 4
    • 0035866393 scopus 로고    scopus 로고
    • DNA fragments in the blood plasma of cancer patients: quantitations and evidence for their origin from apoptotic and necrotic cells
    • Jahr S., Hentze H., Englisch S., et al. DNA fragments in the blood plasma of cancer patients: quantitations and evidence for their origin from apoptotic and necrotic cells. Cancer Res 2001, 61:1659-1665.
    • (2001) Cancer Res , vol.61 , pp. 1659-1665
    • Jahr, S.1    Hentze, H.2    Englisch, S.3
  • 6
    • 33847129200 scopus 로고    scopus 로고
    • Circulating (cell-free) nucleic acids - a promising, non-invasive tool for early detection of several human diseases
    • Swarup V., Rajeswari M.R. Circulating (cell-free) nucleic acids - a promising, non-invasive tool for early detection of several human diseases. FEBS Lett 2007, 581:795-799.
    • (2007) FEBS Lett , vol.581 , pp. 795-799
    • Swarup, V.1    Rajeswari, M.R.2
  • 7
    • 28044468634 scopus 로고    scopus 로고
    • Detection and quantification of mutations in the plasma of patients with colorectal tumors
    • Diehl F., Li M., Dressman D., et al. Detection and quantification of mutations in the plasma of patients with colorectal tumors. Proc Natl Acad Sci U S A 2005, 102:16368-16373.
    • (2005) Proc Natl Acad Sci U S A , vol.102 , pp. 16368-16373
    • Diehl, F.1    Li, M.2    Dressman, D.3
  • 8
    • 84655163371 scopus 로고    scopus 로고
    • Combination epigenetic therapy has efficacy in patients with refractory advanced non-small cell lung cancer
    • Juergens R.A., Wrangle J., Vendetti F.P., et al. Combination epigenetic therapy has efficacy in patients with refractory advanced non-small cell lung cancer. Cancer Discov 2011, 1:598-607.
    • (2011) Cancer Discov , vol.1 , pp. 598-607
    • Juergens, R.A.1    Wrangle, J.2    Vendetti, F.P.3
  • 9
    • 80053144962 scopus 로고    scopus 로고
    • A decade of exploring the cancer epigenome - biological and translational implications
    • Baylin S.B., Jones P.A. A decade of exploring the cancer epigenome - biological and translational implications. Nat Rev Cancer 2011, 11:726-734.
    • (2011) Nat Rev Cancer , vol.11 , pp. 726-734
    • Baylin, S.B.1    Jones, P.A.2
  • 10
    • 84856269241 scopus 로고    scopus 로고
    • DNA methylation as clinically useful biomarkers-light at the end of the tunnel
    • Levenson V.V., Melnikov A.A. DNA methylation as clinically useful biomarkers-light at the end of the tunnel. Pharmaceuticals 2012, 5:94-113.
    • (2012) Pharmaceuticals , vol.5 , pp. 94-113
    • Levenson, V.V.1    Melnikov, A.A.2
  • 12
    • 34447651156 scopus 로고    scopus 로고
    • The struggle to detect circulating DNA
    • Zeerleder S. The struggle to detect circulating DNA. Crit Care 2006, 10.
    • (2006) Crit Care , vol.10
    • Zeerleder, S.1
  • 13
    • 0032894125 scopus 로고    scopus 로고
    • Detection of aberrant promoter hypermethylation of tumor suppressor genes in serum DNA from non-small cell lung cancer patients
    • Esteller M., Sanchez-Cespedes M., Rosell R., Sidransky D., Baylin S.B., Herman J.G. Detection of aberrant promoter hypermethylation of tumor suppressor genes in serum DNA from non-small cell lung cancer patients. Cancer Res 1999, 59:67-70.
    • (1999) Cancer Res , vol.59 , pp. 67-70
    • Esteller, M.1    Sanchez-Cespedes, M.2    Rosell, R.3    Sidransky, D.4    Baylin, S.B.5    Herman, J.G.6
  • 15
    • 77952966822 scopus 로고    scopus 로고
    • Single-tube analysis of DNA methylation with silica superparamagnetic beads
    • Bailey V.J., Zhang Y., Keeley B.P., et al. Single-tube analysis of DNA methylation with silica superparamagnetic beads. Clin Chem 2010, 56:1022-1025.
    • (2010) Clin Chem , vol.56 , pp. 1022-1025
    • Bailey, V.J.1    Zhang, Y.2    Keeley, B.P.3
  • 16
    • 34250802601 scopus 로고    scopus 로고
    • Gene methylation and early detection of genitourinary cancer: the road ahead
    • Cairns P. Gene methylation and early detection of genitourinary cancer: the road ahead. Nat Rev Cancer 2007, 7:531-543.
    • (2007) Nat Rev Cancer , vol.7 , pp. 531-543
    • Cairns, P.1
  • 17
    • 40849124009 scopus 로고    scopus 로고
    • DNA methylation markers and early recurrence in stage I lung cancer
    • Brock M.V., Hooker C.M., Ota-Machida E., et al. DNA methylation markers and early recurrence in stage I lung cancer. N Engl J Med 2008, 358:1118-1128.
    • (2008) N Engl J Med , vol.358 , pp. 1118-1128
    • Brock, M.V.1    Hooker, C.M.2    Ota-Machida, E.3
  • 18
    • 33847358769 scopus 로고    scopus 로고
    • The role of RASSF1A methylation in cancer
    • Hesson L.B., Cooper W.N., Latif F. The role of RASSF1A methylation in cancer. Dis Markers 2007, 23:73-87.
    • (2007) Dis Markers , vol.23 , pp. 73-87
    • Hesson, L.B.1    Cooper, W.N.2    Latif, F.3
  • 19
    • 79952306961 scopus 로고    scopus 로고
    • The prognostic value of RASSF1A promoter hypermethylation in non-small cell lung carcinoma: a systematic review and meta-analysis
    • Wang J., Wang B.C., Chen X., Bi J.W. The prognostic value of RASSF1A promoter hypermethylation in non-small cell lung carcinoma: a systematic review and meta-analysis. Carcinogenesis 2011, 32:411-416.
    • (2011) Carcinogenesis , vol.32 , pp. 411-416
    • Wang, J.1    Wang, B.C.2    Chen, X.3    Bi, J.W.4
  • 21
    • 0036302149 scopus 로고    scopus 로고
    • MagneSil™ paramagnetic particles: magnetics for DNA purification
    • Otto P. MagneSil™ paramagnetic particles: magnetics for DNA purification. J Assoc Lab Autom 2002, 7:34-37.
    • (2002) J Assoc Lab Autom , vol.7 , pp. 34-37
    • Otto, P.1
  • 22
    • 3843083869 scopus 로고    scopus 로고
    • Bionanotechnology based on silica nanoparticles
    • Tan W.H., Wang K.M., He X.X., et al. Bionanotechnology based on silica nanoparticles. Med Res Rev 2004, 24:621-638.
    • (2004) Med Res Rev , vol.24 , pp. 621-638
    • Tan, W.H.1    Wang, K.M.2    He, X.X.3
  • 23
    • 0023183171 scopus 로고
    • Carrier RNA enhancement of recovery of DNA from dilute-solutions
    • Gallagher M.L., Burke W.F., Orzech K. Carrier RNA enhancement of recovery of DNA from dilute-solutions. Biochem Biophys Res Commun 1987, 144:271-276.
    • (1987) Biochem Biophys Res Commun , vol.144 , pp. 271-276
    • Gallagher, M.L.1    Burke, W.F.2    Orzech, K.3
  • 24
    • 68549092715 scopus 로고    scopus 로고
    • Preparation of magnetite-loaded silica microspheres for solid-phase extraction of genomic DNA from soy-based foodstuffs
    • Shi R.B., Wang Y.C., Hu Y.L., Chen L., Wan Q.H. Preparation of magnetite-loaded silica microspheres for solid-phase extraction of genomic DNA from soy-based foodstuffs. J Chromatogr A 2009, 1216:6382-6386.
    • (2009) J Chromatogr A , vol.1216 , pp. 6382-6386
    • Shi, R.B.1    Wang, Y.C.2    Hu, Y.L.3    Chen, L.4    Wan, Q.H.5
  • 25
    • 0037466380 scopus 로고    scopus 로고
    • Methylation patterns and K-ras mutations in tumor and paired serum of resected non-small-cell lung cancer patients
    • Ramirez J.L., Sarries C., de Castro P.L., et al. Methylation patterns and K-ras mutations in tumor and paired serum of resected non-small-cell lung cancer patients. Cancer Lett 2003, 193:207-216.
    • (2003) Cancer Lett , vol.193 , pp. 207-216
    • Ramirez, J.L.1    Sarries, C.2    de Castro, P.L.3
  • 26
    • 0037081085 scopus 로고    scopus 로고
    • Quantitative adenomatous polyposis coli promoter methylation analysis in tumor tissue, serum, and plasma DNA of patients with lung cancer
    • Usadel H., Brabender J., Danenberg K.D., et al. Quantitative adenomatous polyposis coli promoter methylation analysis in tumor tissue, serum, and plasma DNA of patients with lung cancer. Cancer Res 2002, 62:371-375.
    • (2002) Cancer Res , vol.62 , pp. 371-375
    • Usadel, H.1    Brabender, J.2    Danenberg, K.D.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.