Global DNA methylation profiles of somatic embryos of peach palm (Bactris gasipaes Kunth) are influenced by cryoprotectants and droplet-vitrification cryopreservation

Plant Cell, Tissue and Organ Culture

Volumn 114, Issue 3, 2013, Pages 365-372

  Heringer, Angelo S ^a   Steinmacher, Douglas A ^b   Fraga, Hugo P F ^a   Vieira, Leila N ^a   Ree, Joseph Francis ^a   Guerra, Miguel P ^a  

^a FEDERAL UNIVERSITY OF SANTA CATARINA   (Brazil)

^b Biosomatica Institute   (Brazil)

Author keywords

Bactris gasipaes; Cryopreservation; Global DNA methylation; PVS3; Somatic embryogenesis

Indexed keywords

BACTRIS GASIPAES; CRYO-PRESERVATION; DNA METHYLATION; PVS3; SOMATIC EMBRYOGENESIS;

ALKYLATION; DROPS; METHYLATION; PLANTS (BOTANY); VITRIFICATION;

BIOLOGICAL MATERIALS PRESERVATION;

BACTRIS GASIPAES; PRUNUS PERSICA;

EID: 84882849757     PISSN: 01676857     EISSN: None     Source Type: Journal    
DOI: 10.1007/s11240-013-0331-1     Document Type: Article

References (42)

1. Ai P-F, Lu L-P, Song J-J (2012) Cryopreservation of in vitro-grown shoot-tips of Rhabdosia rubescens by encapsulation-dehydration and evaluation of their genetic stability. Plant Cell Tiss Organ Cult 108: 381-387.
2. Al-Bahrany AM, Al-Khayri JM (2012) Optimizing in vitro Cryopreservation of Date Palm (Phoenix dactylifera L.). Biotechnology 11: 59-66.
3. Balick MJ (1988) The palm-tree of life: biology, utilization and conservation. In: Balick MJ (ed) Advances in Economic Botany. Society for Economic Botany, pp 282.
4. Bovi MLA, Martins CC, Spiering SH (2004) Desidratação de sementes de quatro lotes de pupunheira: efeitos sobre a germinação e o vigor. Hort Bras 22: 109-112.
5. Clement CR (2008) Peach palm (Bactris gasipaes). In: Janick J, Paul RE (eds) The Encyclopedia of Fruit and Nuts. CABI Publishing, Wallingford, pp 93-101.
6. Doyle JJ, Doyle JL (1987) A rapid DNA isolation procedure for small quantities of fresh leaf tissue. Phytochem Bull 19: 11-15.
7. Dulloo M, Guarino L, Engelmann F, Maxted N, Newbury J, Attere F, Ford-Lloyd BV (1998) Complementary conservation strategies for the genus Coffea: a case study of Mascarene Coffea species. Genet Res Crop Evol 45: 565-579.
8. Engelmann F (2004) Plant cryopreservation: progress and prospects. In Vitro Cell Dev -P1 40: 427-433.
9. Escalona M, Lorenzo JC, Gonzalez BL, Danquita M, Onzales JL, Desjardins Y, Borroto CG (1999) Pineapple (Ananas comosus (L.) Merr.) micropropagation in temporary immersion systems. Plant Cell Rep 18: 743-748.
10. Finnegan EJ (2010) DNA methylation: a dynamic regulator of genome organization and gene expression in plants. In: Pua EC, Davey MR (eds) Plant developmental biology: biotechnological perspectives, vol 2. Springer, Berlin, pp 295-323.
11. Finnegan EJ, Kovac KA (2000) Plant DNA methyltransferases. Plant Mol Biol 43: 189-201.
12. Fraga HPF, Vieira LN, Caprestano CA, Steinmacher DA, Micke GA, Spudeit DA, Pescador R, Guerra MP (2012) 5-Azacytidine combined with 2, 4-D improves somatic embryogenesis of Acca sellowiana (O. Berg) Burret by means of changes in global DNA methylation levels. Plant Cell Rep 31: 2165-2176.
13. Freckleton RP, Matos DMS, Bovi MLA, Watkinson AR (2003) Predicting the impacts of harvesting using structured population models: the importance of density-dependence and timing of harvest for a tropical palm tree. J Appl Ecol 40: 846-858.
14. Fukao T, Bailey-Serres J (2004) Plant responses to hypoxia-is survival a balancing act? Trends Plant Sci 9: 449-456.
15. Funnekotter B, Kaczmarczyk A, Turner SR, Bunn E, Zhou W, Smith S, Flematti G, Mancera RL (2013) Acclimation-induced changes in cell membrane composition and influence on cryotolerance of in vitro shoots of native plant species. Plant Cell Tiss Organ Cult. doi: 10. 1007/s11240-013-0308-0.
16. Gonzalez-Arnao MT, Panta A, Roca WM, Escobar RH, Engelmann F (2008) Development and large scale application of cryopreservation techniques for shoot and somatic embryo cultures of tropical crops. Plant Cell Tiss Organ Cult 92: 1-13.
17. Hao YJ, Liu QL, Deng XX (2001) Effect of cryopreservation on apple genetic resources at morphological, chromosomal, and molecular levels. Cryobiology 43: 46-53.
18. Harding K (2004) Genetic integrity of cryopreserved plant cells: a review. Cryo Lett 25: 3-22.
19. He XJ, Chen T, Zhu JK (2011) Regulation and function of DNA methylation in plants and animals. Cell Res 21: 442-465.
20. Johannes F, Porcher E, Teixeira FK, Saliba-Colombani V, Simon M, Agier N, Bulski A, Albuisson J, Heredia F, Audigier BG, Dillmann C, Guerche P, Hospital F, Colot V (2009) Assessing the impact of transgenerational epigenetic variation on complex traits. PLoS Genet 5: e1000530.
21. Johnston JW, Harding K, Bremner DH, Souch G, Green J, Lynch PT, Grout B, Benson EE (2005) HPLC analysis of plant DNA methylation: a study of critical methodological factors. Plant Physiol Biochem 43: 844-853.
22. Johnston JW, Benson EE, Harding K (2009) Cryopreservation induces temporal DNA methylation epigenetic changes and differential transcriptional activity in Ribes germplasm. Plant Physiol Bioch 4: 123-131.
23. Jones PA (2012) Functions of DNA methylation: islands, start sites, gene bodies and beyond. Nat Rev Gen 13: 484-492.
24. Kaity A, Ashmore SE, Drew RA, Dulloo ME (2008) Assessment of genetic and epigenetic changes following cryopreservation in papaya. Plant Cell Rep 27: 1529-1539.
25. Kaity A, Drew RA, Ashmore SE (2013) Genetic and epigenetic integrity assessment of acclimatized papaya plants regenerated directly from shoot-tips following short- and long-term cryopreservation. Plant Cell Tiss Organ Cult 112: 75-86.
26. Kohmura H, Sakai A, Chokyu S, Yakuwa T (1992) Cryopreservation of in vitro-cultured multiple bud clusters of asparagus (Asparagus officinalis L. cv. Hiroshimagreen (2np30)) by the techniques of vitrification. Plant Cell Rep 11: 433-437.
27. Mikula A, Tomiczak K, Rybczynski JJ (2011) Cryopreservation enhances embryogenic capacity of Gentiana cruciata (L.) suspension culture and maintains (epi) genetic uniformity of regenerants. Plant Cell Rep 30: 565-574.
28. Mora-Urpí J, Weber JC, Clement CR (1997) Peach palm (Bactris gasipaes Kunth). In: Mora-Urpí J, Weber JC, Clement CR (eds) Promoting the conservation and use of underutilized and neglected crops. Institute of Plant Genetics and Crop Plant Research, Rome, p 81.
29. Morel G, Wetmore RH (1951) Tissue culture of monocotyledons. Am J Bot 38: 138-140.
30. Murashige T, Skoog F (1962) A revised medium for rapid growth and bioassays with tobacco tissue cultures. Physiol Plant 15: 473-497.
31. Ng HH, Bird A (1999) DNA methylation and chromatin modification. Curr Opin Genet Dev 9: 158-163.
32. Nishizawa S, Sakai A, Amano Y, Matsuzawa T (1993) Cryopreservation of asparagus (Asparagus officinalis L.) embryogemc suspension cells and subsequent plant-regeneration by vitrification. Plant Sci 91: 67-73.
33. Noyer-Weidner M, Trautner TA (1993) Methylation of DNA in prokaryotes. In: Saluz HP, Jost JP (eds) DNA Methylation: molecular biology and biological significance. Birkhauser, Boston, pp 39-108.
34. Sakai A, Engelmann F (2007) Vitrification, encapsulation-vitrification and droplet-vitrification: a review. Cryo Lett 28: 151-172.
35. Smulders MJM, de Klerk GJ (2011) Epigenetics in plant tissue culture. Plant Growth Regul 63: 137-146.
36. Steinmacher DA, Saldanha CW, Clement CR, Guerra MP (2007a) Cryopreservation of peach palm zygotic embryos. Cryo lett 28: 13-22.
37. Steinmacher DA, Cangahuala-Inocente GC, Clement CR, Guerra MP (2007b) Somatic embryogenesis from peach palm zygotic embryos. In vitro Cell Dev Plant 43: 124-132.
38. Steinmacher DA, Guerra MP, Saare-Surminski K, Lieberei R (2011) A temporary immersion system improves in vitro regeneration of peach palm through secondary somatic embryogenesis. Ann Bot 108: 1463-1475.
39. Suranthran P, Gantait S, Sinniah UR, Subramaniam S, Alwee SSRS, Roowi SH (2012) Effect of loading and vitrification solutions on survival of cryopreserved oil palm polyembryoids. Plant Growth Regul 66: 101-109.
40. Valledor L, Hasbún R, Meijón M, Rodríguez JL, Santamaría E, Viejo M, Berdasco M, Feito I, Fraga MF, Cañal MJ, Rodríguez R (2007) Involvement of DNA methylation in tree development and micropropagation. Plant Cell Tiss Org Cult 91: 75-86.
41. Wang Z, He Y (2008) Effect of cryopreservation on the development and DNA methylation patterns of Arabidopsis thaliana. Life Sci J 6: 55-60.
42. Yi JY, Sylvestre I, Colin M, Salma M, Lee SY, Kim HH, Park HJ, Engelmann F (2012) Improved cryopreservation using droplet-vitrification and histological changes associated with cryopreservation of Madder (Rubia akane Nakai). Kor J Hort Sci Technol 30: 79-84.