Prevalence of 10 human polyomaviruses in fecal samples from children with acute gastroenteritis: A case-control study

Journal of Clinical Microbiology

Volumn 51, Issue 9, 2013, Pages 3107-3109

  Li, Ke ^a   Guo, Junhua ^b   Zhao, Rong ^a   Xue, Ying ^a   Chen, Lihong ^a   Yang, Jian ^a   Peng, Junping ^a   Jin, Qi ^a  

^a PEKING UNION MEDICAL COLLEGE   (China)

^b Sequenom   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ACUTE GASTROENTERITIS; ARTICLE; CASE CONTROL STUDY; CHILD; CONTROLLED STUDY; DIARRHEA; DNA VIRUS INFECTION; FECES ANALYSIS; FEMALE; HUMAN; KI POLYOMAVIRUS; LIMIT OF DETECTION; MAJOR CLINICAL STUDY; MALE; MATRIX ASSISTED LASER DESORPTION IONIZATION TIME OF FLIGHT MASS SPECTROMETRY; MERKEL CELL POLYOMAVIRUS; MIXED INFECTION; MULTIPLEX POLYMERASE CHAIN REACTION; MW POLYOMAVIRUS; NONHUMAN; POLYOMA VIRUS; PREVALENCE; PRIORITY JOURNAL; SCHOOL CHILD; SENSITIVITY AND SPECIFICITY; SPECIES DIFFERENCE; VIRAL GASTROENTERITIS; VIRUS DETECTION; VIRUS IDENTIFICATION; WU POLYOMAVIRUS;

CASE-CONTROL STUDIES; CHILD, HOSPITALIZED; CHILD, PRESCHOOL; DIARRHEA; FECES; FEMALE; GASTROENTERITIS; HUMANS; INFANT; MALE; MULTIPLEX POLYMERASE CHAIN REACTION; POLYOMAVIRUS; POLYOMAVIRUS INFECTIONS; PREVALENCE; SPECTROMETRY, MASS, MATRIX-ASSISTED LASER DESORPTION-IONIZATION;

EID: 84882758335     PISSN: 00951137     EISSN: 1098660X     Source Type: Journal    
DOI: 10.1128/JCM.01324-13     Document Type: Article

References (23)

1. Gardner SD, Field AM, Coleman DV, Hulme B. 1971. New human papovavirus (B.K.) isolated from urine after renal transplantation. Lancet i:1253-1257.
2. Padgett BL, Walker DL, ZuRhein GM, Eckroade RJ, Dessel BH. 1971. Cultivation of Papova-like Virus from Human Brain with Progressive Multifocal Leucoencephalopathy. Lancet i:1257-1260.
3. Allander T, Andreasson K, Gupta S, Bjerkner A, Bogdanovic G, Persson MA, Dalianis T, Ramqvist T, Andersson B. 2007. Identification of a third human polyomavirus. J. Virol. 81:4130-4136.
4. Buck CB, Phan GQ, Raiji MT, Murphy PM, McDermott DH, McBride AA. 2012. Complete genome sequence of a tenth human polyomavirus. J. Virol. 86:10887.
5. Feng H, Shuda M, Chang Y, Moore PS. 2008. Clonal Integration of A Polyomavirus in Human Merkel Cell Carcinoma. Science 319:1096-1100.
6. Gaynor AM, Nissen MD, Whiley DM, Mackay IM, Lambert SB, Wu G, Brennan DC, Storch GA, Sloots TP, Wang D. 2007. Identification of a novel polyomavirus from patients with acute respiratory tract infections. PLoS Pathog. 3:e64. doi:10.1371/journal.ppat.0030064.
7. Schowalter RM, Pastrana DV, Pumphrey KA, Moyer AL, Buck CB. 2010. Merkel cell polyomavirus and two previously unknown polyomaviruses are chronically shed from human skin. Cell Host Microbe 7:509-515.
8. Scuda N, Hofmann J, Calvignac-Spencer S, Ruprecht K, Liman P, Kuhn J, Hengel H, Ehlers B. 2011. A novel human polyomavirus closely related to the African green monkey-derived lymphotropic polyomavirus. J. Virol. 85:4586-4590.
9. Siebrasse EA, Reyes A, Lim ES, Zhao G, Mkakosya RS, Manary MJ, Gordon JI, Wang D. 2012. Identification of MW polyomavirus, a novel polyomavirus in human stool. J. Virol. 86:10321-10326.
10. van der Meijden E, Janssens RW, Lauber C, Bouwes Bavinck JN, Gorbalenya AE, Feltkamp MC. 2010. Discovery of a new human polyomavirus associated with trichodysplasia spinulosa in an immunocompromized patient. PLoS Pathog. 6:e1001024. doi:10.1371/journal.ppat .1001024.
11. Yu G, Greninger AL, Isa P, Phan TG, Martinez MA, de la Luz Sanchez M, Contreras JF, Santos-Preciado JI, Parsonnet J, Miller S, Derisi JL, Delwart E, Arias CF, Chiu CY. 2012. Discovery of a novel polyomavirus in acute diarrheal samples from children. PLoS One 7:e49449. doi:10.1371/journal.pone.0049449.
12. Lim ES, Reyes A, Antonio M, Saha D, Ikumapayi UN, Adeyemi M, Stine OC, Skelton R, Brennan DC, Mkakosya RS, Manary MJ, Gordon JI, Wang D. 2013. Discovery of STL polyomavirus, a polyomavirus of ancestral recombinant origin that encodes a unique T antigen by alternative splicing. Virology 436:295-303.
13. Korup S, Rietscher J, Calvignac-Spencer S, Trusch F, Hofmann J, Moens U, Sauer I, Voigt S, Schmuck R, Ehlers B. 2013. Identification of a novel human polyomavirus in organs of the gastrointestinal tract. PLoS One 8:e58021. doi:10.1371/journal.pone.0058021.
14. Feltkamp MC, Kazem S, van der Meijden E, Lauber C, Gorbalenya AE. 2013. From Stockholm to Malawi: recent developments in studying human polyomaviruses. J. Gen. Virol. 94:482-496.
15. Jiang M, Abend JR, Johnson SF, Imperiale MJ. 2009. the Role of Polyomaviruses in Human Disease. Virology 384:266-273.
16. Krumbholz A, Bininda-Emonds OR, Wutzler P, Zell R. 2009. Phylogenetics, evolution, and medical importance of polyomaviruses. Infect. Genet. Evol. 9:784-799.
17. Khan MA, Bass DM. 2010. Viral infections: new and emerging. Curr. Opin. Gastroenterol. 26:26-30.
18. Ramani S, Kang G. 2009. Viruses causing childhood diarrhoea in the developing world. Curr. Opin. Infect. Dis. 22:477-482.
19. Oeth P, del Mistro G, Marnellos G, Shi T, van den Boom D. 2009. Qualitative and quantitative genotyping using single base primer extension coupled with matrix-assisted laser desorption/ionization time-offlight mass spectrometry (MassARRAY). Methods Mol. Biol. 578:307-343.
20. Peng J, Gao L, Guo J, Wang T, Wang L, Yao Q, Zhu H, Jin Q. 2013. Type-specific detection of 30 oncogenic human papillomaviruses by genotyping both E6 and L1 genes J. Clin. Microbiol. 51:402-408.
21. Peng J, Yang F, Xiong Z, Guo J, Du J, Hu Y, Jin Q. 2013. Sensitive and rapid detection of viruses associated with hand foot and mouth disease using multiplexed MALDI-TOF analysis. J. Clin. Virol. 56:170-174.
22. Ross P, Hall L, Smirnov I, Haff L. 1998. High level multiplex genotyping by MALDI-TOF mass spectrometry. Nat. Biotechnol. 16:1347-1351.
23. Cheng WX, Jin Y, Duan ZJ, Xu ZQ, Qi HM, Zhang Q, Yu JM, Zhu L, Jin M, Liu N, Cui SX, Li HY, Fang ZY. 2008. Human bocavirus in children hospitalized for acute gastroenteritis: a case-control study. Clin. Infect. Dis. 47:161-167.