-
1
-
-
33748191291
-
Statistical mechanical modeling of genome-wide transcription factor occupancy data by MatrixREDUCE
-
Foat, B. C. et al. (2006) Statistical mechanical modeling of genome-wide transcription factor occupancy data by MatrixREDUCE. Bioinformatics, 22, e141-e149.
-
(2006)
Bioinformatics
, vol.22
-
-
Foat, B.C.1
-
3
-
-
34247200577
-
The AtGenExpress global stress expression data set: Protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses
-
Kilian, J. et al. (2007) The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses. Plant J., 50, 347-363.
-
(2007)
Plant J.
, vol.50
, pp. 347-363
-
-
Kilian, J.1
-
4
-
-
25444522648
-
Genome wide analysis of Arabidopsis core promoters
-
Molina, C. and Grotewold, E. (2005) Genome wide analysis of Arabidopsis core promoters. BMC Genomics, 6, 25.
-
(2005)
BMC Genomics
, vol.6
, pp. 25
-
-
Molina, C.1
Grotewold, E.2
-
5
-
-
34247579156
-
A survey of motif discovery methods in an integrated framework
-
Sandve, G. K. and Drablos, F. (2006) A survey of motif discovery methods in an integrated framework. Biol. Direct., 1, 11.
-
(2006)
Biol. Direct.
, vol.1
, pp. 11
-
-
Sandve, G.K.1
Drablos, F.2
-
6
-
-
16244362244
-
A gene expression map of Arabidopsis thaliana development
-
Schmid, M. et al. (2005) A gene expression map of Arabidopsis thaliana development. Nat. Genet., 37, 501-506.
-
(2005)
Nat. Genet.
, vol.37
, pp. 501-506
-
-
Schmid, M.1
-
7
-
-
79957624886
-
Identification of the MBF1 heat-response regulon of Arabidopsis thaliana
-
Suzuki, N. et al. (2011) Identification of the MBF1 heat-response regulon of Arabidopsis thaliana. Plant J., 66, 844-851.
-
(2011)
Plant J.
, vol.66
, pp. 844-851
-
-
Suzuki, N.1
-
8
-
-
21144439147
-
Assessing computational tools for the discovery of transcription factor binding sites
-
Tompa, M. et al. (2005) Assessing computational tools for the discovery of transcription factor binding sites. Nat. Biotechnol., 23, 137-144.
-
(2005)
Nat. Biotechnol.
, vol.23
, pp. 137-144
-
-
Tompa, M.1
-
9
-
-
64549127763
-
Genome-wide discovery of cis-elements in promoter sequences using gene expression data
-
Troukhan, M. et al. (2009) Genome-wide discovery of cis-elements in promoter sequences using gene expression data. OMICS, 13, 139-151.
-
(2009)
OMICS
, vol.13
, pp. 139-151
-
-
Troukhan, M.1
-
10
-
-
34648830573
-
The diversity of plant heat stress transcription factors
-
von Koskull-Doring, P. et al. (2007) The diversity of plant heat stress transcription factors. Trends Plant Sci., 12, 452-457.
-
(2007)
Trends Plant Sci.
, vol.12
, pp. 452-457
-
-
Von Koskull-Doring, P.1
-
11
-
-
84882616378
-
GAlib A C library of genetic algorithm components
-
(09 July 2013 date last accessed)
-
Wall, M. (2007) GAlib A C library of genetic algorithm components. Version 2. 4. 7. Available from: 5http://lancet. mit. edu/ga/4 (09 July 2013, date last accessed).
-
(2007)
Version 2. 4. 7. Available From: 5
-
-
Wall, M.1
-
12
-
-
84855167999
-
Transcriptomic analysis reveals calcium regulation of specific promoter motifs in Arabidopsis
-
Walley, H. et al. (2011) Transcriptomic analysis reveals calcium regulation of specific promoter motifs in Arabidopsis. Plant Cell, 23, 4079-4095.
-
(2011)
Plant Cell
, vol.23
, pp. 4079-4079
-
-
Walley, H.1
-
13
-
-
0037783247
-
Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1, 000 rapidly responding genes and new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism
-
Wang, R. et al. (2003) Microarray analysis of the nitrate response in Arabidopsis roots and shoots reveals over 1, 000 rapidly responding genes and new linkages to glucose, trehalose-6-phosphate, iron, and sulfate metabolism. Plant Physiol., 132, 556-567.
-
(2003)
Plant Physiol.
, vol.132
, pp. 556-567
-
-
Wang, R.1
-
14
-
-
84873594686
-
Evaluation of methods for modeling transcription factor sequence specificity
-
Weirauch, M. T. et al. (2013) Evaluation of methods for modeling transcription factor sequence specificity. Nat. Biotechnol., 31, 126-134.
-
(2013)
Nat. Biotechnol.
, vol.31
, pp. 126-134
-
-
Weirauch, M.T.1
|