High macro-collinearity between lima bean (Phaseolus lunatus L.) and the common bean (P. vulgaris L.) as revealed by comparative cytogenetic mapping

Theoretical and Applied Genetics

Volumn 126, Issue 7, 2013, Pages 1909-1916

  Almeida, Cícero ^a,b   Pedrosa Harand, Andrea ^a  

^a FEDERAL UNIVERSITY OF PERNAMBUCO   (Brazil)

^b FEDERAL UNIVERSITY OF ALAGOAS   (Brazil)

Author keywords

[No Author keywords available]

Indexed keywords

CHROMOSOME NUMBERS; COLLINEARITY; CONSERVED SYNTENY; CYTOGENETIC MAPS; DNA PATTERNS; MITOTIC CHROMOSOMES; PHASEOLUS LUNATUS; STRUCTURAL REARRANGEMENT;

BACTERIOPHAGES;

CHROMOSOMES;

ARTICLE; BACTERIAL ARTIFICIAL CHROMOSOME; CHROMOSOME MAP; COMPARATIVE STUDY; GENETIC VARIABILITY; GENETICS; IN SITU HYBRIDIZATION; MOLECULAR CLONING; PHASEOLUS; PLANT CHROMOSOME;

CHROMOSOME MAPPING; CHROMOSOMES, ARTIFICIAL, BACTERIAL; CHROMOSOMES, PLANT; CLONING, MOLECULAR; GENETIC VARIATION; IN SITU HYBRIDIZATION; PHASEOLUS;

PHASEOLUS LUNATUS; PHASEOLUS VULGARIS;

EID: 84881611679     PISSN: 00405752     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00122-013-2106-9     Document Type: Article

References (32)

1. Adam-Blodon AF, Sevignac M, Dron M (1994) A genetic map of common bean to localize specific resistance genes against anthracnose. Genome 37:915-924. doi:10.1139/g94-131
2. Almeida C, Pedrosa-Harand A (2011) Contrasting rDNA evolution in lima bean (Phaseolus lunatus L.) and common bean (P. vulgaris L., Fabaceae). Cytogenet Genome Res 132:212-217. doi:10.1159/ 000321677
3. Arumuganathan K, Earle D (1991) Nuclear DNA content of some important plant species. Plant Mol Biol Rep 9:208-2018
4. Bonifácio EM, Fonsêca A, Almeida C, Santos KGB, Pedrosa-Harand A (2012) Comparative cytogenetic mapping between the lima bean (Phaseolus lunatus L.) and the common bean (P. vulgaris L.). Theor Appl Genet 124:1513-1520. doi:10.1007/s00122-012-1806-x
5. Cabral JS, Felix LP, Guerra M (2006) Heterochromatin diversity and its co-localization with 5S and 45S rDNA sites in chromosomes of four Maxillaria species (Orchidaceae). Genet Mol Biol 29:659-664. doi:10.1590/S1415-47572006000400015
6. David P, Chen NW, Pedrosa-Harand A, Thareau V, Sévignac M, Cannon SB, Debouck D, Langin T, Geffroy V (2009) A nomadic subtelomeric disease resistance gene cluster in common bean. Plant Physiol 151:1048-1065. doi:10.1104/pp.109.142109
7. Debouck DC, Linan JJH, Campana SA, dela Cruz Rojas JH (1987) Observation on the domestication of Phaseolus lunatus L. FAO/ IBPGH. Plant Genet Res Newslet 70:26-32
8. Delgado-Salinas A, Bibler R, Lavin M (2006) Phylogeny of the genus Phaseolus (Leguminosae): a recent diversification in an ancient landscape. Syst Bot 31:779-791. doi:10.1600/03636440677969 5960
9. Fofana B, Baudoin JP, Vekemans X, Debouck DG, Jardin P (1999) Molecular evidence for an Andean origin and a secondary gene pool for the Lima bean (Phaseolus lunatus L.) using chloroplast DNA. Theor Appl Genet 98:202-212. doi:10.1007/s00122005 1059
10. Fonsêca A, Ferreira J, dos Santos TRB, Mosiolek M, Bellucci E, Kami J, Gepts P, Geffroy V, Schweizer D, Santos KGB, Pedrosa-Harand A (2010) Cytogenetic map of common bean (Phaseolus vulgaris L.). Chromosom Res 18:487-502. doi: 10.1007/s10577-010-9129-8
11. Freyre R, Skroch PW, Geffroy V, Adam-Blondon A-F, Shirmohamadali A, Johnson WC, Llaca V, Nodari RO, Pereira PA, Tsai S-M, Tohme J, Dron M, Nienhuis J, Vallejos CE, Gepts P (1998) Towards an integrated linkage map of common bean. 4. Development of a core linkage map and alignment of RFLP maps. Theor Appl Genet 97:847-856
12. Gepts P (1998) Origin and evolution of common bean: past events and recent trends. Hort Sci 33:1124-1130
13. Gutiérrez-Salgado A, Gepts P, Debouck DG (1995) Evidence for two gene pools in the Lima bean, Phaseolus lunatus L., in the Americas. Genet Res Crop Evol 42:15-28
14. Iovene M, Cavagnaro PF, Senalik D, Buell R, Jiang J, Simon PW (2011) Comparative FISH mapping of Daucus species (Apiaceae family). Chromosom Res 19:493-506. doi:10.1007/s10577-011-9202-y
15. Jiang J, Gill BS, Wang GL, Ronald PC, Ward DC (1995) Metaphase and interphase fluorescence in situ hybridization mapping of the rice genome with bacterial artificial chromosomes. Proc Natl Acad Sci USA 92:4487-4491
16. Kami J, Poncet V, Geffroy V, Gepts P (2006) Development of four phylogenetically-arrayed BAC libraries and sequence of the APA locus in Phaseolus vulgaris. Theor Appl Genet 112:987-998. doi:10.1007/s00122-005-0201-2
17. Li D, Cuevas HE, Yang L, Li Y, Garcia-Mas J, Zalapa J, Staub JE, Luan F, Reddy U, He X, Gong Z, Weng Y (2011) Syntenic relationships between cucumber (Cucumis sativus L.) and melon (C. melo L.) chromosomes as revealed by comparative genetic mapping. BMC Genomics 12:396. doi:10.1186/1471-2164-12-396
18. Lioi L (1996) Phaseolin diversity in wild Lima bean (Phaseolus lunatus L.) in American centres of origin. Genet Res Crop Evol 43:575-579. doi:10.1007/BF00138834
19. Lou Q, Iovene M, Spooner DM, Buell CR, Jiang J (2010) Evolution of chromosome 6 of Solanum species revealed by comparative fluorescence in situ hybridization mapping. Chromosoma 119:435-442. doi:10.1007/s00412-010-0269-6
20. Maquet A, Vekemans X, Baudoin J-P (1999) Phylogenetic study on wild allies of Lima bean, Phaseolus lunatus (Fabaceae), and implications on its origin. Plant Syst Evol 218:43-54. doi: 10.1007/BF01087033
21. Mercado-Ruaro P, Delgado-Salinas A (2000) Cytogenetics studies in Phaseolus vulgaris L. (Fabaceae). Genet Mol Biol 23:985-987. doi:10.1590/S1415-47572000000400043
22. Mok DWS, Mok MC (1976) A modified Giemsa technique for identifying bean chromosomes. J Hered 67:187-188
23. Moscone EA, Klein F, Lambrou M, Fuchs J, Schweizer D (1999) Quantitative karyotyping and dual-color FISH mapping of 5S and 18S-25S rDNA probes in the cultivated Phaseolus species (Leguminosae). Genome 42:1224-1233. doi:10.1139/g99-070
24. Nodari RO, Tsai SM, Guzmán P, Gilbertson RL, Gepts P (1993) Towards an integrated linkage map of common bean. 3. Mapping genetic factors controlling host-bacteria interactions. Genetics 134:341-350
25. Pedrosa-Harand A, Almeida CCS, Mosiolek M, Blair MW, Schweizer D, Guerra M (2006) Extensive ribosomal DNA amplification during Andean common bean (Phaseolus vulgaris L.). Theor Appl Genet 112:924-933. doi:10.1007/s00122-005-0196-8
26. Pedrosa-Harand A, Porch T, Gepts P (2008) Standard nomenclature for common bean chromosomes and linkage groups. Ann Rep Bean Improv Coop 51:106-107
27. Pedrosa-Harand A, Kami J, Gepts P, Geffroy V, Schweizer D (2009) Cytogenetic mapping of common bean chromosomes reveals a less compartmentalized small-genome plant species. Chromosom Res 17:405-417. doi:10.1007/s10577-009-9031-4
28. Schweizer D, Ambros P (1979) Analysis of nucleolus organizer regions (NORs) in mitotic and polytene chromosomes of Phaseolus coccineus by silver staining and Giemsa C-banding. Plant Syst Evol 132:27-51. doi:10.1007/BF00983083
29. Vallejos CE, Sakiyama NS, Chase CD (1992)A molecularmarker based linkage map of Phaseolus vulgaris L. Genetics 131:733-740
30. Zhang P, Li W, Friebe B, Gill BS (2004) Simultaneous painting of three genomes in hexaploid wheat by BAC-FISH. Genome 47:979-987. doi:10.1139/g04-042
31. Zheng J, Nakata M, Uchiyama H, Morikawa H, Tanaka R (1991) Giemsa C-banding in several species of Phaseolus L. and Vigna Savi, Fabaceae. Cytologia 56:459-466
32. Zheng J, Nakata M, Irifune K, Tanaka R, Morikawa H (1993) Fluorescent banding pattern analysis of eight taxa of Phaseolus and Vigna in relation to their phylogenetic relationships. Theor Appl Genet 87:38-43. doi:10.1007/BF00223741