메뉴 건너뛰기




Volumn 121, Issue 9, 2013, Pages 878-885

Spoligotyping of Mycobacterium tuberculosis isolates among pulmonary tuberculosis patients in Amhara Region, Ethiopia

Author keywords

Ethiopia; Molecular epidemiology; Spoligotyping; Tuberculosis

Indexed keywords

BACTERIAL DNA;

EID: 84881551380     PISSN: 09034641     EISSN: 16000463     Source Type: Journal    
DOI: 10.1111/apm.12046     Document Type: Article
Times cited : (18)

References (44)
  • 1
    • 84881542509 scopus 로고    scopus 로고
    • World Health Organization [Internet]. Geneva: global tuberculosis control: surveillance, planning, financing. (accessed 15 April 2011).
    • World Health Organization [Internet]. Geneva: global tuberculosis control: surveillance, planning, financing. 2011: http://www.who.int/tb/publications/global_report/en/index.html (accessed 15 April 2011).
    • (2011)
  • 4
    • 0036246219 scopus 로고    scopus 로고
    • Molecular epidemiology and drug resistance of Mycobacterium tuberculosis isolates from Ethiopian pulmonary tuberculosis patients with and without human immunodeficiency virus infection
    • Bruchfeld J, Aderaye G, Palme IB, Bjorvatn B, Ghebremichael S, Hoffner S, et al. Molecular epidemiology and drug resistance of Mycobacterium tuberculosis isolates from Ethiopian pulmonary tuberculosis patients with and without human immunodeficiency virus infection. J Clin Microbiol 2002;40:1636-40.
    • (2002) J Clin Microbiol , vol.40 , pp. 1636-1640
    • Bruchfeld, J.1    Aderaye, G.2    Palme, I.B.3    Bjorvatn, B.4    Ghebremichael, S.5    Hoffner, S.6
  • 5
    • 0029004711 scopus 로고
    • Analysis of the population structure of Mycobacterium tuberculosis in Ethiopia, Tunisia, and The Netherlands: usefulness of DNA typing for global tuberculosis epidemiology
    • Hermans PW, Messadi F, Guebrexabher H, van Soolingen D, de Haas PE, Heersma H, et al. Analysis of the population structure of Mycobacterium tuberculosis in Ethiopia, Tunisia, and The Netherlands: usefulness of DNA typing for global tuberculosis epidemiology. J Infect Dis 1995;171:1504-13.
    • (1995) J Infect Dis , vol.171 , pp. 1504-1513
    • Hermans, P.W.1    Messadi, F.2    Guebrexabher, H.3    van Soolingen, D.4    de Haas, P.E.5    Heersma, H.6
  • 6
    • 0035134502 scopus 로고    scopus 로고
    • Molecular epidemiology of tuberculosis and other mycobacterial infections: main methodologies and achievements
    • van Soolingen D. Molecular epidemiology of tuberculosis and other mycobacterial infections: main methodologies and achievements. J Intern Med 2001;249:1-26.
    • (2001) J Intern Med , vol.249 , pp. 1-26
    • van Soolingen, D.1
  • 7
    • 0035482795 scopus 로고    scopus 로고
    • Epidemiological evidence of the spread of a Mycobacterium tuberculosis strain of the Beijing genotype on Gran Canaria Island
    • Caminero JA, Pena MJ, Campos-Herrero MI, Rodríguez JC, García I, Cabrera P, et al. Epidemiological evidence of the spread of a Mycobacterium tuberculosis strain of the Beijing genotype on Gran Canaria Island. Am J Respir Crit Care Med 2001;164:1165-70.
    • (2001) Am J Respir Crit Care Med , vol.164 , pp. 1165-1170
    • Caminero, J.A.1    Pena, M.J.2    Campos-Herrero, M.I.3    Rodríguez, J.C.4    García, I.5    Cabrera, P.6
  • 8
    • 0033045950 scopus 로고    scopus 로고
    • Spoligotyping in molecular epidemiology of tuberculosis in Ghana
    • Goyal M, Acheampong JW, Griffin G, Shaw R. Spoligotyping in molecular epidemiology of tuberculosis in Ghana. J Infect 1999;38:171-5.
    • (1999) J Infect , vol.38 , pp. 171-175
    • Goyal, M.1    Acheampong, J.W.2    Griffin, G.3    Shaw, R.4
  • 11
    • 0034626014 scopus 로고    scopus 로고
    • Recent transmission of tuberculosis in Madrid (Spain): usefulness of molecular techniques
    • Iñigo Martínez J, Chaves Sánchez F, Arce Arnáez A, Alonso Sanz M, Palenque Mataix E, Jaén Herreros F. Recent transmission of tuberculosis in Madrid (Spain): usefulness of molecular techniques. Med Clin 2000;115:241-5.
    • (2000) Med Clin , vol.115 , pp. 241-245
    • Iñigo, M.J.1    Chaves, S.F.2    Arce, A.A.3    Alonso, S.M.4    Palenque, M.E.5    Jaén, H.F.6
  • 12
    • 0031692843 scopus 로고    scopus 로고
    • Evaluation of strategies for molecular finger printing for use in the routine work of a Mycobacterium reference unit
    • Wilson SM, Gross S, Drobniewski F. Evaluation of strategies for molecular finger printing for use in the routine work of a Mycobacterium reference unit. J Clin Microbiol 1998;36:3385-8.
    • (1998) J Clin Microbiol , vol.36 , pp. 3385-3388
    • Wilson, S.M.1    Gross, S.2    Drobniewski, F.3
  • 13
    • 84881547088 scopus 로고    scopus 로고
    • Amhara Regional State Health Bureau. Annual Health Service Report. Bahir Dar, Ethiopia
    • Amhara Regional State Health Bureau. Annual Health Service Report. Bahir Dar, Ethiopia, 2008.
    • (2008)
  • 14
    • 84881550334 scopus 로고    scopus 로고
    • The United States Agency for International Development (USAID) [Internet]. Addis Ababa: Final evaluation: The private sector program in Ethiopia. (accessed 24 July 2011).
    • The United States Agency for International Development (USAID) [Internet]. Addis Ababa: Final evaluation: The private sector program in Ethiopia. 2009: Http://www.ghtechproject.com/Attachment.axd?ID=65d87be9-5166-4011 (accessed 24 July 2011).
    • (2009)
  • 15
    • 0028067277 scopus 로고
    • Rendering of mycobacteria safe for molecular diagnostic studies and development of a lysis method for strand displacement amplification and PCR
    • Zwadyk P, Down JA, Myers N, Dey MS. Rendering of mycobacteria safe for molecular diagnostic studies and development of a lysis method for strand displacement amplification and PCR. J Clin Microbiol 1994;32:2140-6.
    • (1994) J Clin Microbiol , vol.32 , pp. 2140-2146
    • Zwadyk, P.1    Down, J.A.2    Myers, N.3    Dey, M.S.4
  • 16
    • 0036301673 scopus 로고    scopus 로고
    • Rapid and simple approach for identification of Mycobacterium tuberculosis complex isolates by PCR based genomic deletion analysis
    • Parsons LM, Brosch R, Cole ST, Somoskövi A, Loder A, Bretzel G, et al. Rapid and simple approach for identification of Mycobacterium tuberculosis complex isolates by PCR based genomic deletion analysis. J Clin Microbiol 2002;40:2339-45.
    • (2002) J Clin Microbiol , vol.40 , pp. 2339-2345
    • Parsons, L.M.1    Brosch, R.2    Cole, S.T.3    Somoskövi, A.4    Loder, A.5    Bretzel, G.6
  • 17
    • 0030911908 scopus 로고    scopus 로고
    • Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology
    • Kamerbeek J, Schouls L, Kolk A, van Agterveld M, van Soolingen D, Kuijper S, et al. Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology. J Clin Microbiol 1997;35:907-14.
    • (1997) J Clin Microbiol , vol.35 , pp. 907-914
    • Kamerbeek, J.1    Schouls, L.2    Kolk, A.3    van Agterveld, M.4    van Soolingen, D.5    Kuijper, S.6
  • 18
    • 84881556552 scopus 로고    scopus 로고
    • Base SPOLDB4: (accessed 15 April 2111).
    • Base SPOLDB4 2011: http://www.pasteur-guadeloupe.fr/tb/spoldb4/spoldb4.pdf (accessed 15 April 2111).
    • (2011)
  • 19
    • 84881541841 scopus 로고    scopus 로고
    • Run SPOTCLUST (accessed 15 April 2111).
    • Run SPOTCLUST 2011: http://tbinsight.cs.rpi.edu/run_spotclust.html (accessed 15 April 2111).
    • (2011)
  • 20
    • 0032702989 scopus 로고    scopus 로고
    • Transmission dynamics of tuberculosis in a high-incidence country: prospective analysis by PCR DNA fingerprinting
    • Haas WH, Engelmann G, Amthor B, Shyamba S, Mugala F, Felten M, et al. Transmission dynamics of tuberculosis in a high-incidence country: prospective analysis by PCR DNA fingerprinting. J Clin Microbiol 1999;37:3975-9.
    • (1999) J Clin Microbiol , vol.37 , pp. 3975-3979
    • Haas, W.H.1    Engelmann, G.2    Amthor, B.3    Shyamba, S.4    Mugala, F.5    Felten, M.6
  • 22
    • 0035092639 scopus 로고    scopus 로고
    • Molecular and conventional epidemiology of Mycobacterium tuberculosis in Botswana: a population-based prospective study of 301 pulmonary tuberculosis patients
    • Lockman S, Sheppard JD, Braden CR, Mwasekaga MJ, Woodley CL, Kenyon TA, et al. Molecular and conventional epidemiology of Mycobacterium tuberculosis in Botswana: a population-based prospective study of 301 pulmonary tuberculosis patients. J Clin Microbiol 2001;39:1042-7.
    • (2001) J Clin Microbiol , vol.39 , pp. 1042-1047
    • Lockman, S.1    Sheppard, J.D.2    Braden, C.R.3    Mwasekaga, M.J.4    Woodley, C.L.5    Kenyon, T.A.6
  • 23
    • 33646227714 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology
    • Brudey K, Driscoll JR, Rigouts L, Prodinger WM, Gori A, Al-Hajoj SA, et al. Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology. BMC Microbiol 2006;6:23-40.
    • (2006) BMC Microbiol , vol.6 , pp. 23-40
    • Brudey, K.1    Driscoll, J.R.2    Rigouts, L.3    Prodinger, W.M.4    Gori, A.5    Al-Hajoj, S.A.6
  • 25
    • 80051662124 scopus 로고    scopus 로고
    • Tuberculosis in Sudan: a study of Mycobacterium tuberculosis strain genotype and susceptibility to anti-tuberculosis drugs
    • Sharaf Eldin GS, Fadl-Elmula I, Ali MS, Ali AB, Salih AL, Mallard K, et al. Tuberculosis in Sudan: a study of Mycobacterium tuberculosis strain genotype and susceptibility to anti-tuberculosis drugs. BMC Infect Dis 2011;11:219.
    • (2011) BMC Infect Dis , vol.11 , pp. 219
    • Sharaf Eldin, G.S.1    Fadl-Elmula, I.2    Ali, M.S.3    Ali, A.B.4    Salih, A.L.5    Mallard, K.6
  • 26
    • 34447321827 scopus 로고    scopus 로고
    • M. tuberculosis genotypic diversity and drug susceptibility pattern in HIVinfected and non-HIV-infected patients in northern Tanzania
    • Kibiki GS, Mulder B, Dolmans WM, de Beer JL, Boeree M, Sam N, et al. M. tuberculosis genotypic diversity and drug susceptibility pattern in HIVinfected and non-HIV-infected patients in northern Tanzania. BMC Microbiol 2007;7:1-21.
    • (2007) BMC Microbiol , vol.7 , pp. 1-21
    • Kibiki, G.S.1    Mulder, B.2    Dolmans, W.M.3    de Beer, J.L.4    Boeree, M.5    Sam, N.6
  • 27
    • 0037505359 scopus 로고    scopus 로고
    • Genetic biodiversity of Mycobacterium tuberculosis complex strains from patients with pulmonary tuberculosis in Cameroon
    • Niobe-Eyangoh SN, Kuaban C, Sorlin P, Cunin P, Thonnon J, Sola C, et al. Genetic biodiversity of Mycobacterium tuberculosis complex strains from patients with pulmonary tuberculosis in Cameroon. J Clin Microbiol 2003;41:2547-53.
    • (2003) J Clin Microbiol , vol.41 , pp. 2547-2553
    • Niobe-Eyangoh, S.N.1    Kuaban, C.2    Sorlin, P.3    Cunin, P.4    Thonnon, J.5    Sola, C.6
  • 28
    • 5444248384 scopus 로고    scopus 로고
    • High rates of clustering of strains causing tuberculosis in Harare, Zimbabwe: a molecular epidemiological study
    • Easterbrook PJ, Gibson A, Murad S, Lamprecht D, Ives N, Ferguson A, et al. High rates of clustering of strains causing tuberculosis in Harare, Zimbabwe: a molecular epidemiological study. J Clin Microbiol 2004;42:4536-44.
    • (2004) J Clin Microbiol , vol.42 , pp. 4536-4544
    • Easterbrook, P.J.1    Gibson, A.2    Murad, S.3    Lamprecht, D.4    Ives, N.5    Ferguson, A.6
  • 29
    • 77954686391 scopus 로고    scopus 로고
    • Molecular diversity of Mycobacterium tuberculosis isolates from patients with pulmonary tuberculosis in Mozambique
    • Viegas SO, Machado A, Groenheit R, Ghebremichael S, Pennhag A, Gudo PS, et al. Molecular diversity of Mycobacterium tuberculosis isolates from patients with pulmonary tuberculosis in Mozambique. BMC Microbiol 2010;10:195.
    • (2010) BMC Microbiol , vol.10 , pp. 195
    • Viegas, S.O.1    Machado, A.2    Groenheit, R.3    Ghebremichael, S.4    Pennhag, A.5    Gudo, P.S.6
  • 31
    • 78649922271 scopus 로고    scopus 로고
    • IS6110-restriction fragment length polymorphism and spoligotyping analysis of Mycobacterium tuberculosis clinical isolates for investigating epidemiologic distribution in Korea
    • Choi GE, Jang MH, Song EJ, Jeong SH, Kim JS, Lee WG, et al. IS6110-restriction fragment length polymorphism and spoligotyping analysis of Mycobacterium tuberculosis clinical isolates for investigating epidemiologic distribution in Korea. J Korean Med Sci 2010;25:1716-21.
    • (2010) J Korean Med Sci , vol.25 , pp. 1716-1721
    • Choi, G.E.1    Jang, M.H.2    Song, E.J.3    Jeong, S.H.4    Kim, J.S.5    Lee, W.G.6
  • 32
    • 1542287650 scopus 로고    scopus 로고
    • Beijing family and other genotypes of Mycobacterium tuberculosis isolates in Okayama district
    • Ohata R, Tada A. Beijing family and other genotypes of Mycobacterium tuberculosis isolates in Okayama district. Kekkaku 2004;79:47-53.
    • (2004) Kekkaku , vol.79 , pp. 47-53
    • Ohata, R.1    Tada, A.2
  • 36
    • 0041329742 scopus 로고    scopus 로고
    • Molecular epidemiology and drug resistance of Mycobacterium tuberculosis isolates in the Archangel prison in Russia: predominance of the W-Beijing clone family
    • Toungoussova OS, Mariandyshev A, Bjune G, Sandven P, Caugant DA. Molecular epidemiology and drug resistance of Mycobacterium tuberculosis isolates in the Archangel prison in Russia: predominance of the W-Beijing clone family. Clin Infect Dis 2003;37:665-72.
    • (2003) Clin Infect Dis , vol.37 , pp. 665-672
    • Toungoussova, O.S.1    Mariandyshev, A.2    Bjune, G.3    Sandven, P.4    Caugant, D.A.5
  • 38
    • 78650039972 scopus 로고    scopus 로고
    • Molecular detection of mixed infections of Mycobacterium tuberculosis strains in sputum samples from patients in Karonga District, Malawi
    • Mallard K, McNerney R, Crampin AC, Houben R, Ndlovu R, Munthali L, et al. Molecular detection of mixed infections of Mycobacterium tuberculosis strains in sputum samples from patients in Karonga District, Malawi. J Clin Microbiol 2010;48:4512-8.
    • (2010) J Clin Microbiol , vol.48 , pp. 4512-4518
    • Mallard, K.1    McNerney, R.2    Crampin, A.C.3    Houben, R.4    Ndlovu, R.5    Munthali, L.6
  • 39
    • 50549088494 scopus 로고    scopus 로고
    • Mycobacterium tuberculosis spoligotypes and drug susceptibility pattern of isolates from tuberculosis patients in peri-urban Kampala, Uganda
    • Asiimwe1 BB, Ghebremichael S, Kallenius G, Koivula T, Joloba ML. Mycobacterium tuberculosis spoligotypes and drug susceptibility pattern of isolates from tuberculosis patients in peri-urban Kampala, Uganda. BMC Infect Dis 2008;8:101.
    • (2008) BMC Infect Dis , vol.8 , pp. 101
    • Asiimwe1, B.B.1    Ghebremichael, S.2    Kallenius, G.3    Koivula, T.4    Joloba, M.L.5
  • 41
    • 33749521717 scopus 로고    scopus 로고
    • A first insight into the genetic diversity of Mycobacterium tuberculosis in Dar es Salaam, Tanzania, assessed by spoligotyping
    • Eldholm V, Matee M, Mfinanga SG, Heun M, Dahle UR. A first insight into the genetic diversity of Mycobacterium tuberculosis in Dar es Salaam, Tanzania, assessed by spoligotyping. BMC Microbiol 2006;6:76.
    • (2006) BMC Microbiol , vol.6 , pp. 76
    • Eldholm, V.1    Matee, M.2    Mfinanga, S.G.3    Heun, M.4    Dahle, U.R.5
  • 42
    • 14944351111 scopus 로고    scopus 로고
    • High incidence of the Beijing genotype among multi-drug resistant isolates of Mycobacterium tuberculosis in a tertiary care centre in Mumbai, India
    • Almeida D, Rodriques C, Ashavid TF, Lalvani A, Udwadia ZF, Mehta A. High incidence of the Beijing genotype among multi-drug resistant isolates of Mycobacterium tuberculosis in a tertiary care centre in Mumbai, India. Clin Infect Dis 2005;40:881-6.
    • (2005) Clin Infect Dis , vol.40 , pp. 881-886
    • Almeida, D.1    Rodriques, C.2    Ashavid, T.F.3    Lalvani, A.4    Udwadia, Z.F.5    Mehta, A.6
  • 44
    • 43549091823 scopus 로고    scopus 로고
    • Use of cluster-graphs from spoligotyping data to study genotype similarities and a comparison of three indices to quantify recent tuberculosis transmission among culture positive cases in French Guiana during a eight year period
    • Guernier V, Sola C, Brudey K, Guégan JF, Rastogi N. Use of cluster-graphs from spoligotyping data to study genotype similarities and a comparison of three indices to quantify recent tuberculosis transmission among culture positive cases in French Guiana during a eight year period. BMC Infect Dis 2008;14:46.
    • (2008) BMC Infect Dis , vol.14 , pp. 46
    • Guernier, V.1    Sola, C.2    Brudey, K.3    Guégan, J.F.4    Rastogi, N.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.