Molecular diversity of Mycobacterium tuberculosis isolates from patients with pulmonary tuberculosis in Mozambique

BMC Microbiology

Volumn 10, Issue , 2010, Pages

  Viegas, Sofia O ^a,b,c   MacHado, Adelina ^a   Groenheit, Ramona ^c,d   Ghebremichael, Solomon ^c,d   Pennhag, Alexandra ^d   Gudo, Paula S ^e   Cuna, Zaina ^e   Miotto, Paolo ^f   Hill, Véronique ^g   Marrufo, Tatiana ^a   Cirillo, Daniela M ^f   Rastogi, Nalin ^g   Källenius, Gunilla ^c   Koivula, Tuija ^c,d  

^a EDUARDO MONDLANE UNIVERSITY   (Mozambique)

^b INSTITUTO NACIONAL DE SAÚDE   (Mozambique)

^c KAROLINSKA INSTITUTE   (Sweden)

^d SWEDISH INSTITUTE FOR INFECTIOUS DISEASE CONTROL   (Sweden)

^e MINISTRY OF HEALTH   (Mozambique)

^f SAN RAFFAELE HOSPITAL   (Italy)

^g Institut Pasteur de Guadeloupe   (Guadeloupe)

Author keywords

[No Author keywords available]

Indexed keywords

ADOLESCENT; ADULT; AFRICA; AGED; ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; CHINA; CLADISTICS; CONTROLLED STUDY; DATA BASE; EPIDEMIC; FEMALE; GENETIC VARIABILITY; GEOGRAPHIC DISTRIBUTION; HEREDITY; HUMAN; INDIA; LUNG TUBERCULOSIS; MAJOR CLINICAL STUDY; MALE; MEDITERRANEAN SEA; MOLECULAR CLONING; MOZAMBIQUE; MYCOBACTERIUM TUBERCULOSIS; NONHUMAN; SOUTH AND CENTRAL AMERICA; SPOLIGOTYPING; CLASSIFICATION; GENETICS; ISOLATION AND PURIFICATION; MICROBIOLOGY; MIDDLE AGED; MOLECULAR GENETICS;

MYCOBACTERIUM TUBERCULOSIS;

ADOLESCENT; ADULT; FEMALE; GENETIC VARIATION; HUMANS; MIDDLE AGED; MOLECULAR SEQUENCE DATA; MOZAMBIQUE; MYCOBACTERIUM TUBERCULOSIS; TUBERCULOSIS, PULMONARY; YOUNG ADULT;

EID: 77954686391     PISSN: 14712180     EISSN: 14712180     Source Type: Journal    
DOI: 10.1186/1471-2180-10-195     Document Type: Article

References (28)

1. Global tuberculosis control - epidemiology, strategy, financing. WHO Report. 2009
2. Genotyping of genetically monomorphic bacteria: DNA sequencing in mycobacterium tuberculosis highlights the limitations of current methodologies. I Comas S Homolka S Niemann S Gagneux, PLoS One 2009 4 11 7815 10.1371/journal.pone.0007815 19915672
3. Simultaneous detection and strain differentiation of Mycobacterium tuberculosis for diagnosis and epidemiology. J Kamerbeek L Schouls A Kolk M van Agterveld D van Soolingen S Kuijper A Bunschoten H Molhuizen R Shaw M Goyal, et al. J Clin Microbiol 1997 35 4 907 914 9157152
4. Multidrug and Extensively Drug-Resistant Tuberculosis: 2010 Global Report on Surveillance and Response. World Health Organization
5. Mycobacterium tuberculosis complex genetic diversity: mining the fourth international spoligotyping database (SpolDB4) for classification, population genetics and epidemiology. K Brudey JR Driscoll L Rigouts WM Prodinger A Gori SA Al-Hajoj C Allix L Aristimuno J Arora V Baumanis, et al. BMC Microbiol 2006 6 23 10.1186/1471-2180-6-23 16519816
6. A first insight into the genetic diversity of Mycobacterium tuberculosis in Dar es Salaam, Tanzania, assessed by spoligotyping. V Eldholm M Matee SG Mfinanga M Heun UR Dahle, BMC Microbiol 2006 6 76 10.1186/1471-2180-6-76 16970826
7. M. tuberculosis genotypic diversity and drug susceptibility pattern in HIV-infected and non-HIV-infected patients in northern Tanzania. GS Kibiki B Mulder WM Dolmans JL de Beer M Boeree N Sam D van Soolingen C Sola AG van der Zanden, BMC Microbiol 2007 7 51 10.1186/1471-2180-7-51 17540031
8. High rates of clustering of strains causing tuberculosis in Harare, Zimbabwe: a molecular epidemiological study. PJ Easterbrook A Gibson S Murad D Lamprecht N Ives A Ferguson O Lowe P Mason A Ndudzo A Taziwa, et al. J Clin Microbiol 2004 42 10 4536 4544 10.1128/JCM.42.10.4536-4544.2004 15472306
9. Identification of MDR-TB Beijing/W and other Mycobacterium tuberculosis genotypes in Nairobi, Kenya. WA Githui AM Jordaan ES Juma P Kinyanjui FG Karimi J Kimwomi H Meme P Mumbi EM Streicher R Warren, et al. Int J Tuberc Lung Dis 2004 8 3 352 360 15139475
10. Predominance of a single genotype of Mycobacterium tuberculosis in regions of Southern Africa. V Chihota L Apers S Mungofa W Kasongo IM Nyoni R Tembwe G Mbulo M Tembo EM Streicher GD van der Spuy, et al. Int J Tuberc Lung Dis 2007 11 3 311 318 17352098
11. Unexpectedly high proportion of ancestral Manu genotype Mycobacterium tuberculosis strains cultured from tuberculosis patients in Egypt. ZH Helal MS Ashour SA Eissa G Abd-Elatef T Zozio S Babapoor N Rastogi MI Khan, J Clin Microbiol 2009 47 9 2794 2801 10.1128/JCM.00360-09 19553569
12. Patients with active tuberculosis often have different strains in the same sputum specimen. RM Warren TC Victor EM Streicher M Richardson N Beyers NC Gey van Pittius PD van Helden, Am J Respir Crit Care Med 2004 169 5 610 614 10.1164/rccm.200305-714OC 14701710
13. Worldwide occurrence of Beijing/W strains of Mycobacterium tuberculosis: a systematic review. JR Glynn J Whiteley PJ Bifani K Kremer D van Soolingen, Emerg Infect Dis 2002 8 8 843 849 12141971
14. Definition of the Beijing/W lineage of Mycobacterium tuberculosis on the basis of genetic markers. K Kremer JR Glynn T Lillebaek S Niemann NE Kurepina BN Kreiswirth PJ Bifani D van Soolingen, J Clin Microbiol 2004 42 9 4040 4049 10.1128/JCM.42.9.4040-4049.2004 15364987 (Pubitemid 39296121)
15. Recent and rapid emergence of W-Beijing strains of Mycobacterium tuberculosis in Cape Town, South Africa. D Cowley D Govender B February M Wolfe L Steyn J Evans RJ Wilkinson MP Nicol, Clin Infect Dis 2008 47 10 1252 1259 10.1086/592575 18834315
16. Molecular epidemiology of Mycobacterium tuberculosis in a South African community with high HIV prevalence. K Middelkoop LG Bekker B Mathema E Shashkina N Kurepina A Whitelaw D Fallows C Morrow B Kreiswirth G Kaplan, et al. J Infect Dis 2009 200 8 1207 1211 10.1086/605930 19764885
17. Mycobacterium tuberculosis Beijing genotype, northern Malawi. JR Glynn AC Crampin H Traore MD Yates FD Mwaungulu BM Ngwira SD Chaguluka DT Mwafulirwa S Floyd C Murphy, et al. Emerg Infect Dis 2005 11 1 150 153 15705343
18. Genetic characterization of the Guinea-Bissau family of Mycobacterium tuberculosis complex strains. T Koivula M Ekman T Leitner S Lofdahl S Ghebremicahel S Mostowy MA Behr SB Svenson G Kallenius, Microbes Infect 2004 6 3 272 278 10.1016/j.micinf.2003.12.006 15026014
19. Use of spoligotyping and large sequence polymorphisms to study the population structure of the Mycobacterium tuberculosis complex in a cohort study of consecutive smear-positive tuberculosis cases in The Gambia. BC de Jong M Antonio T Awine K Ogungbemi YP de Jong S Gagneux K DeRiemer T Zozio N Rastogi M Borgdorff, et al. J Clin Microbiol 2009 47 4 994 1001 10.1128/JCM.01216-08 19193842
20. Mycobacterium tuberculosis spoligotypes and drug susceptibility pattern of isolates from tuberculosis patients in peri-urban Kampala, Uganda. BB Asiimwe S Ghebremichael G Kallenius T Koivula ML Joloba, BMC Infect Dis 2008 8 101 10.1186/1471-2334-8-101 18662405
21. Anti-tuberculosis drug resistance in the world: The WHO/IUATLD Global Project on Anti-Tuberculosis Dug Resistance Surveillance. World Health Organization, Report 2:Prevalence and trends Geneva 2000 (WHO/CDS/TB/2000.278)
22. Variable host-pathogen compatibility in Mycobacterium tuberculosis. S Gagneux K DeRiemer T Van M Kato-Maeda BC de Jong S Narayanan M Nicol S Niemann K Kremer MC Gutierrez, et al. Proc Natl Acad Sci USA 2006 103 8 2869 2873 10.1073/pnas.0511240103 16477032
23. United Nations Statistics Division- Standard Country and Area Codes Classifications (M49). http://unstats.un.org/unsd/methods/m49/m49regin.htm
24. ISO 3166-1 alpha-3-wikipedia, the free encyclopedia. http://en.wikipedia. org/wiki/ISO-3166-1-alpha-3
25. Restricted structural gene polymorphism in the Mycobacterium tuberculosis complex indicates evolutionarily recent global dissemination. S Sreevatsan X Pan KE Stockbauer ND Connell BN Kreiswirth TS Whittam JM Musser, Proc Natl Acad Sci USA 1997 94 18 9869 9874 10.1073/pnas.94.18.9869 9275218
26. A new evolutionary scenario for the Mycobacterium tuberculosis complex. R Brosch SV Gordon M Marmiesse P Brodin C Buchrieser K Eiglmeier T Garnier C Gutierrez G Hewinson K Kremer, et al. Proc Natl Acad Sci USA 2002 99 6 3684 3689 10.1073/pnas.052548299 11891304
27. Characterization of Mycobacterium tuberculosis isolates from patients in Houston, Texas, by spoligotyping. H Soini X Pan A Amin EA Graviss A Siddiqui JM Musser, J Clin Microbiol 2000 38 2 669 676 10655365
28. Molecular evolution of the Mycobacterium tuberculosis complex. N Rastogi C Sola, Amedeo Online Textbooks, Palomino JC, Leao S, Ritacco V, 2007 53 91 http://www.tuberculosistextbook.com/index.htm