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Volumn 5, Issue 3, 2013, Pages 879-885

Molecular tools reveal diets of insectivorous birds from predator fecal matter

Author keywords

Avian predator; Community ecology; Diet breadth; Insectivore; Molecular scatology; Trophic interactions

Indexed keywords


EID: 84880977063     PISSN: 18777252     EISSN: 18777260     Source Type: Journal    
DOI: 10.1007/s12686-013-9900-1     Document Type: Review
Times cited : (43)

References (34)
  • 1
    • 0025183708 scopus 로고
    • Basic local alignment search tool
    • Altschul SF, Gish W, Miller W et al (1990) Basic local alignment search tool. J Mol Biol 215: 403-410.
    • (1990) J Mol Biol , vol.215 , pp. 403-410
    • Altschul, S.F.1    Gish, W.2    Miller, W.3
  • 3
    • 79959397022 scopus 로고    scopus 로고
    • Molecular diet analysis of two African free-tailed bats (Molossidae) using high throughput sequencing
    • doi:10.1371/journal.pone.0021441
    • Bohmann K, Monadjem A, Noer CL et al (2011) Molecular diet analysis of two African free-tailed bats (Molossidae) using high throughput sequencing. PLoS ONE 6: e21441. doi: 10. 1371/journal. pone. 0021441.
    • (2011) PLoS ONE , vol.6
    • Bohmann, K.1    Monadjem, A.2    Noer, C.L.3
  • 4
    • 79954606752 scopus 로고    scopus 로고
    • Proportion of prey consumed can be determined from faecal DNA using real-time PCR
    • Bowles E, Schulte PM, Tollit DJ et al (2011) Proportion of prey consumed can be determined from faecal DNA using real-time PCR. Mol Ecol Resour 11: 530-540.
    • (2011) Mol Ecol Resour , vol.11 , pp. 530-540
    • Bowles, E.1    Schulte, P.M.2    Tollit, D.J.3
  • 5
    • 33646570544 scopus 로고    scopus 로고
    • Relative efficiency of fecal versus regurgitated samples for assessing diet and the deleterious effects of a tartar emetic on migratory birds
    • doi:10.1111/j.1557-9263.2006.00032.x
    • Carlisle JD, Holberton RL (2006) Relative efficiency of fecal versus regurgitated samples for assessing diet and the deleterious effects of a tartar emetic on migratory birds. J Field Ornithol 77: 126-135. doi: 10. 1111/j. 1557-9263. 2006. 00032. x.
    • (2006) J Field Ornithol , vol.77 , pp. 126-135
    • Carlisle, J.D.1    Holberton, R.L.2
  • 6
    • 65949122093 scopus 로고    scopus 로고
    • Species on the menu of a generalist predator, the eastern red bat (Lasiurus borealis): using a molecular approach to detect arthropod prey
    • doi:10.1111/j.1365-294X.2009.04184.x
    • Clare EL, Fraser EE, Braid HE et al (2009) Species on the menu of a generalist predator, the eastern red bat (Lasiurus borealis): using a molecular approach to detect arthropod prey. Mol Ecol 18: 2532-2542. doi: 10. 1111/j. 1365-294X. 2009. 04184. x.
    • (2009) Mol Ecol , vol.18 , pp. 2532-2542
    • Clare, E.L.1    Fraser, E.E.2    Braid, H.E.3
  • 7
    • 79953768954 scopus 로고    scopus 로고
    • Eating local: influences of habitat on the diet of little brown bats (Myotis lucifugus)
    • doi:10.1111/j.1365-294X.2011.05040.x
    • Clare EL, Barber BR, Sweeney BW et al (2011) Eating local: influences of habitat on the diet of little brown bats (Myotis lucifugus). Mol Ecol 20: 1772-1780. doi: 10. 1111/j. 1365-294X. 2011. 05040. x.
    • (2011) Mol Ecol , vol.20 , pp. 1772-1780
    • Clare, E.L.1    Barber, B.R.2    Sweeney, B.W.3
  • 8
    • 72849126924 scopus 로고    scopus 로고
    • A PCR-based method for diet analysis in freshwater organisms using 18S rDNA barcoding on faeces
    • doi:10.1111/j.1755-0998.2009.02795.x
    • Corse E, Costedoat C, Chappaz R et al (2010) A PCR-based method for diet analysis in freshwater organisms using 18S rDNA barcoding on faeces. Mol Ecol Resour 10: 96-108. doi: 10. 1111/j. 1755-0998. 2009. 02795. x.
    • (2010) Mol Ecol Resour , vol.10 , pp. 96-108
    • Corse, E.1    Costedoat, C.2    Chappaz, R.3
  • 9
    • 33748682933 scopus 로고    scopus 로고
    • Quantification of damage in DNA recovered from highly degraded samples-a case study on DNA in faeces
    • Deagle BE, Eveson JP, Jarman SN (2006) Quantification of damage in DNA recovered from highly degraded samples-a case study on DNA in faeces. Front Zool 3: 11.
    • (2006) Front Zool , vol.3 , pp. 11
    • Deagle, B.E.1    Eveson, J.P.2    Jarman, S.N.3
  • 10
    • 38849163396 scopus 로고    scopus 로고
    • Studying seabird diet through genetic analysis of faeces: a case study on macaroni penguins (Eudyptes chrysolophus)
    • doi:10.1371/journal.pone.0000831
    • Deagle BE, Gales NJ, Evans K et al (2007) Studying seabird diet through genetic analysis of faeces: a case study on macaroni penguins (Eudyptes chrysolophus). PLoS ONE 2: e831. doi: 10. 1371/journal. pone. 0000831.
    • (2007) PLoS ONE , vol.2
    • Deagle, B.E.1    Gales, N.J.2    Evans, K.3
  • 11
    • 65449140394 scopus 로고    scopus 로고
    • Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces
    • doi:10.1111/j.1365-294X.2009.04158.x
    • Deagle BE, Kirkwood R, Jarman SN (2009) Analysis of Australian fur seal diet by pyrosequencing prey DNA in faeces. Mol Ecol 18: 2022-2038. doi: 10. 1111/j. 1365-294X. 2009. 04158. x.
    • (2009) Mol Ecol , vol.18 , pp. 2022-2038
    • Deagle, B.E.1    Kirkwood, R.2    Jarman, S.N.3
  • 12
    • 77956879874 scopus 로고    scopus 로고
    • Pyrosequencing faecal DNA to determine diet of little penguins: is what goes in what comes out?
    • doi:10.1007/s10592-010-0096-6
    • Deagle BE, Chiaradia A, McInnes J, Jarman SN (2010) Pyrosequencing faecal DNA to determine diet of little penguins: is what goes in what comes out? Conserv Genet 11: 2039-2048. doi: 10. 1007/s10592-010-0096-6.
    • (2010) Conserv Genet , vol.11 , pp. 2039-2048
    • Deagle, B.E.1    Chiaradia, A.2    McInnes, J.3    Jarman, S.N.4
  • 13
    • 0028528103 scopus 로고
    • DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates
    • Folmer O, Black M, Hoeh W et al (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotech 3: 294-299.
    • (1994) Mol Mar Biol Biotech , vol.3 , pp. 294-299
    • Folmer, O.1    Black, M.2    Hoeh, W.3
  • 15
    • 77951655289 scopus 로고    scopus 로고
    • What's inside: Anatomy and physiology
    • In: Podulka S, Rohrbaugh R, Bonney R, chap 4, 2nd edn. Princeton University Press, Ithaca
    • Howard E, Heiser J (2004) What's inside: anatomy and physiology. In: Podulka S, Rohrbaugh R, Bonney R (eds) Cornell lab of ornithology's handbook of bird biology, chap 4, 2nd edn. Princeton University Press, Ithaca.
    • (2004) Cornell Lab of Ornithology's Handbook of Bird Biology
    • Howard, E.1    Heiser, J.2
  • 16
    • 0036897767 scopus 로고    scopus 로고
    • A DNA-based method for identification of krill species and its application to analysing the diet of marine vertebrate predators
    • Jarman SN, Gales NJ, Tierney M et al (2002) A DNA-based method for identification of krill species and its application to analysing the diet of marine vertebrate predators. Mol Ecol 11: 2679-2690.
    • (2002) Mol Ecol , vol.11 , pp. 2679-2690
    • Jarman, S.N.1    Gales, N.J.2    Tierney, M.3
  • 17
    • 38849100922 scopus 로고    scopus 로고
    • Molecular analysis of predation: a review of best practice for DNA-based approaches
    • doi:10.1111/j.1365-294X.2007.03613.x
    • King RA, Read DS, Traugott M, Symondson WOC (2008) Molecular analysis of predation: a review of best practice for DNA-based approaches. Mol Ecol 17: 947-963. doi: 10. 1111/j. 1365-294X. 2007. 03613. x.
    • (2008) Mol Ecol , vol.17 , pp. 947-963
    • King, R.A.1    Read, D.S.2    Traugott, M.3    Symondson, W.O.C.4
  • 18
    • 0028165303 scopus 로고
    • Provisioning in Western Bluebirds is not related to offspring sex
    • doi:10.1093/beheco/5.4.455
    • Leonard ML, Teather KL, Horn AG et al (1994) Provisioning in Western Bluebirds is not related to offspring sex. Behav Ecol 5: 455-459. doi: 10. 1093/beheco/5. 4. 455.
    • (1994) Behav Ecol , vol.5 , pp. 455-459
    • Leonard, M.L.1    Teather, K.L.2    Horn, A.G.3
  • 19
    • 0026571783 scopus 로고
    • Digestive modulation in a seasonal frugivore, the American Robin (Turdus migratorius)
    • Levey DJ, Karasov WH (1992) Digestive modulation in a seasonal frugivore, the American Robin (Turdus migratorius). Am J Physiol 262: G711-G718.
    • (1992) Am J Physiol , vol.262
    • Levey, D.J.1    Karasov, W.H.2
  • 20
    • 44949174263 scopus 로고    scopus 로고
    • Modelling long-distance seed dispersal in heterogeneous landscapes
    • doi:10.1111/j.1365-2745.2008.01401.x
    • Levey DJ, Tewksbury JJ, Bolker BM (2008) Modelling long-distance seed dispersal in heterogeneous landscapes. J Ecol 96: 599-608. doi: 10. 1111/j. 1365-2745. 2008. 01401. x.
    • (2008) J Ecol , vol.96 , pp. 599-608
    • Levey, D.J.1    Tewksbury, J.J.2    Bolker, B.M.3
  • 21
    • 21144480513 scopus 로고
    • An improved ligature technique for dietary sampling in nestling birds
    • Mellott RS, Woods PE (1993) An improved ligature technique for dietary sampling in nestling birds. J Field Ornithol 64: 205-210.
    • (1993) J Field Ornithol , vol.64 , pp. 205-210
    • Mellott, R.S.1    Woods, P.E.2
  • 22
    • 0000824648 scopus 로고
    • A method for obtaining food samples from insectivorous birds
    • Moody DT (1970) A method for obtaining food samples from insectivorous birds. Auk 87: 579.
    • (1970) Auk , vol.87 , pp. 579
    • Moody, D.T.1
  • 23
    • 80053605834 scopus 로고    scopus 로고
    • DNA-based faecal dietary analysis: a comparison of qPCR and high throughput sequencing approaches
    • doi:10.1371/journal.pone.0025776
    • Murray DC, Bunce M, Cannell BL et al (2011) DNA-based faecal dietary analysis: a comparison of qPCR and high throughput sequencing approaches. PLoS ONE 6: e25776. doi: 10. 1371/journal. pone. 0025776.
    • (2011) PLoS ONE , vol.6
    • Murray, D.C.1    Bunce, M.2    Cannell, B.L.3
  • 26
    • 79959237528 scopus 로고    scopus 로고
    • Molecular scatology: how to improve prey DNA detection success in avian faeces?
    • Oehm J, Juen A, Nagiller K et al (2011) Molecular scatology: how to improve prey DNA detection success in avian faeces? Mol Ecol Resour 11: 620-628.
    • (2011) Mol Ecol Resour , vol.11 , pp. 620-628
    • Oehm, J.1    Juen, A.2    Nagiller, K.3
  • 27
    • 84859602598 scopus 로고    scopus 로고
    • Who is eating what: diet assessment using next generation sequencing
    • doi:10.1111/j.1365-294X.2011.05403.x
    • Pompanon F, Deagle BE, Symondson WOC et al (2011) Who is eating what: diet assessment using next generation sequencing. Mol Ecol. doi: 10. 1111/j. 1365-294X. 2011. 05403. x.
    • (2011) Mol Ecol
    • Pompanon, F.1    Deagle, B.E.2    Symondson, W.O.C.3
  • 28
    • 84859623428 scopus 로고    scopus 로고
    • High-throughput sequencing offers insight into mechanisms of resource partitioning in cryptic bat species
    • doi:10.1002/ece3.49
    • Razgour O, Clare EL, Zeale MRK et al (2011) High-throughput sequencing offers insight into mechanisms of resource partitioning in cryptic bat species. Ecol Evol 1: 556-570. doi: 10. 1002/ece3. 49.
    • (2011) Ecol Evol , vol.1 , pp. 556-570
    • Razgour, O.1    Clare, E.L.2    Zeale, M.R.K.3
  • 29
    • 33846288887 scopus 로고    scopus 로고
    • Comparison of DNA extraction methods for analysis of turkey cecal microbiota
    • Scupham A, Jones J, Wesley I (2007) Comparison of DNA extraction methods for analysis of turkey cecal microbiota. J Appl Microbiol 102: 401-409.
    • (2007) J Appl Microbiol , vol.102 , pp. 401-409
    • Scupham, A.1    Jones, J.2    Wesley, I.3
  • 30
    • 79959966529 scopus 로고    scopus 로고
    • Barcoding a quantified food web: crypsis, concepts, ecology and hypotheses
    • doi:10.1371/journal.pone.0014424
    • Smith MA, Eveleigh ES, McCann KS et al (2011) Barcoding a quantified food web: crypsis, concepts, ecology and hypotheses. PLoS ONE 6: e14424. doi: 10. 1371/journal. pone. 0014424.
    • (2011) PLoS ONE , vol.6
    • Smith, M.A.1    Eveleigh, E.S.2    McCann, K.S.3
  • 31
    • 0036010821 scopus 로고    scopus 로고
    • Molecular identification of prey in predator diets
    • Symondson WOC (2002) Molecular identification of prey in predator diets. Mol Ecol 11: 627-641.
    • (2002) Mol Ecol , vol.11 , pp. 627-641
    • Symondson, W.O.C.1
  • 32
    • 58949104467 scopus 로고    scopus 로고
    • New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach
    • doi:10.1111/j.1755-0998.2008.02352.x
    • Valentini A, Miquel C, Nawaz MA et al (2009) New perspectives in diet analysis based on DNA barcoding and parallel pyrosequencing: the trnL approach. Mol Ecol Resour 9: 51-60. doi: 10. 1111/j. 1755-0998. 2008. 02352. x.
    • (2009) Mol Ecol Resour , vol.9 , pp. 51-60
    • Valentini, A.1    Miquel, C.2    Nawaz, M.A.3
  • 33
    • 79960862758 scopus 로고    scopus 로고
    • When species matches are unavailable are DNA barcodes correctly assigned to higher taxa? an assessment using sphingid moths
    • Wilson JJ, Rougerie R, Schonfeld J et al (2011) When species matches are unavailable are DNA barcodes correctly assigned to higher taxa? an assessment using sphingid moths. BMC Ecol 11: 18.
    • (2011) BMC Ecol , vol.11 , pp. 18
    • Wilson, J.J.1    Rougerie, R.2    Schonfeld, J.3
  • 34
    • 79751508033 scopus 로고    scopus 로고
    • Taxon-specific PCR for DNA barcoding arthropod prey in bat faeces
    • doi:10.1111/j.1755-0998.2010.02920.x
    • Zeale MRK, Butlin RK, Barker GLA et al (2011) Taxon-specific PCR for DNA barcoding arthropod prey in bat faeces. Mol Ecol Resour 11: 236-244. doi: 10. 1111/j. 1755-0998. 2010. 02920. x.
    • (2011) Mol Ecol Resour , vol.11 , pp. 236-244
    • Zeale, M.R.K.1    Butlin, R.K.2    Barker, G.L.A.3


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