메뉴 건너뛰기




Volumn 11, Issue , 2011, Pages

When species matches are unavailable are DNA barcodes correctly assigned to higher taxa? An assessment using sphingid moths

Author keywords

[No Author keywords available]

Indexed keywords

ACCURACY ASSESSMENT; ASSESSMENT METHOD; DNA; MOTH; SPECIES INVENTORY; SPECIES OCCURRENCE; TAXONOMY;

EID: 79960862758     PISSN: None     EISSN: 14726785     Source Type: Journal    
DOI: 10.1186/1472-6785-11-18     Document Type: Article
Times cited : (75)

References (51)
  • 1
    • 33847411916 scopus 로고    scopus 로고
    • DNA barcoding in animal species: progress, potential and pitfalls
    • Waugh J. DNA barcoding in animal species: progress, potential and pitfalls. BioEssays 2007, 29:188-197.
    • (2007) BioEssays , vol.29 , pp. 188-197
    • Waugh, J.1
  • 2
  • 3
    • 34248149943 scopus 로고    scopus 로고
    • BOLD: The Barcode of Life Data System http://www.dnabarcoding.org
    • Ratnasingham S, Hebert PDN. BOLD: The Barcode of Life Data System http://www.dnabarcoding.org. Mol Ecol Notes 2007, 7:355-364.
    • (2007) Mol Ecol Notes , vol.7 , pp. 355-364
    • Ratnasingham, S.1    Hebert, P.D.N.2
  • 4
    • 33646825840 scopus 로고    scopus 로고
    • DNA barcodes for insect pest identification: a test case with tussock moths (Lepidoptera: Lymantriidae)
    • Ball SL, Armstrong KF. DNA barcodes for insect pest identification: a test case with tussock moths (Lepidoptera: Lymantriidae). Can J For Res 2006, 36:337-350.
    • (2006) Can J For Res , vol.36 , pp. 337-350
    • Ball, S.L.1    Armstrong, K.F.2
  • 7
    • 33846670553 scopus 로고    scopus 로고
    • A new species of Plusia (Lepidoptera: Noctuidae) from North America
    • Handfield D, Handfield L. A new species of Plusia (Lepidoptera: Noctuidae) from North America. Canadian Entomologist 2006, 138:853-859.
    • (2006) Canadian Entomologist , vol.138 , pp. 853-859
    • Handfield, D.1    Handfield, L.2
  • 8
    • 30744433531 scopus 로고    scopus 로고
    • DNA barcodes for biosecurity: Invasive species identification
    • Armstrong KF, Ball SL. DNA barcodes for biosecurity: Invasive species identification. Phil Trans Roy Soc Lond B 2005, 360:1813-1823.
    • (2005) Phil Trans Roy Soc Lond B , vol.360 , pp. 1813-1823
    • Armstrong, K.F.1    Ball, S.L.2
  • 9
    • 34248161638 scopus 로고    scopus 로고
    • A comprehensive DNA sequence library is essential for identification with DNA barcodes
    • Ekrem T, Willassen E, Stur E. A comprehensive DNA sequence library is essential for identification with DNA barcodes. Mol Phyl Evol 2007, 43:530-542.
    • (2007) Mol Phyl Evol , vol.43 , pp. 530-542
    • Ekrem, T.1    Willassen, E.2    Stur, E.3
  • 10
    • 37349085210 scopus 로고    scopus 로고
    • Character-based DNA barcoding allows discrimination of genera, species and populations in Odonata
    • Rach J, DeSalle R, Sarkar IN, Schierwater B, Hadrys H. Character-based DNA barcoding allows discrimination of genera, species and populations in Odonata. Proc Roy Soc Lond B 2008, 275:237-247.
    • (2008) Proc Roy Soc Lond B , vol.275 , pp. 237-247
    • Rach, J.1    DeSalle, R.2    Sarkar, I.N.3    Schierwater, B.4    Hadrys, H.5
  • 11
    • 34548435753 scopus 로고    scopus 로고
    • DNA barcoding cannot reliably identify species of the blowfly genus Protocalliphora (Diptera: Calliphoridae)
    • Whitworth TL, Dawson RD, Magalon H, Baudry E. DNA barcoding cannot reliably identify species of the blowfly genus Protocalliphora (Diptera: Calliphoridae). Proc Roy Soc Lond B 2007, 274:1731-1739.
    • (2007) Proc Roy Soc Lond B , vol.274 , pp. 1731-1739
    • Whitworth, T.L.1    Dawson, R.D.2    Magalon, H.3    Baudry, E.4
  • 12
    • 0042531561 scopus 로고    scopus 로고
    • Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species
    • Hebert PDN, Ratnasingham S, deWaard JR. Barcoding animal life: cytochrome c oxidase subunit 1 divergences among closely related species. Proc Roy Soc Lond B 2003, 270:S96-S99.
    • (2003) Proc Roy Soc Lond B , vol.270
    • Hebert, P.D.N.1    Ratnasingham, S.2    deWaard, J.R.3
  • 13
    • 0004383875 scopus 로고
    • Food-plant groups of Semanophorinae (Lepidoptera-Sphingidae): A possible taxonomic tool
    • Harris P. Food-plant groups of Semanophorinae (Lepidoptera-Sphingidae): A possible taxonomic tool. Canadian Entomologist 1972, 104:71-80.
    • (1972) Canadian Entomologist , vol.104 , pp. 71-80
    • Harris, P.1
  • 14
    • 77956284971 scopus 로고    scopus 로고
    • Assessing the value of DNA barcodes and other priority gene regions for molecular phylogenetics of Lepidoptera
    • Wilson JJ. Assessing the value of DNA barcodes and other priority gene regions for molecular phylogenetics of Lepidoptera. PLoS ONE 2010, 5(5):e10525.
    • (2010) PLoS ONE , vol.5 , Issue.5
    • Wilson, J.J.1
  • 15
    • 80052086641 scopus 로고    scopus 로고
    • Lepidoptera barcode of Life: Sphingidae
    • Lepidoptera barcode of Life: Sphingidae. , http://www.lepbarcoding.org/sphingidae/index.php
  • 17
    • 66449116084 scopus 로고    scopus 로고
    • Phylogeny and biogeography of hawkmoths (Lepidoptera: Sphingidae): evidence from five nuclear genes
    • Kawahara AY, Mignault AA, Regier JC, Kitching IJ, Mitter C. Phylogeny and biogeography of hawkmoths (Lepidoptera: Sphingidae): evidence from five nuclear genes. PLoS ONE 2009, 4(5):e5719.
    • (2009) PLoS ONE , vol.4 , Issue.5
    • Kawahara, A.Y.1    Mignault, A.A.2    Regier, J.C.3    Kitching, I.J.4    Mitter, C.5
  • 18
    • 65949122093 scopus 로고    scopus 로고
    • Species on the menu of a generalist predator, the eastern red bat (Lasiurus borealis): using a molecular approach to detect arthropod prey
    • Clare EL, Fraser EE, Braid HE, Fenton MB, Hebert PDN. Species on the menu of a generalist predator, the eastern red bat (Lasiurus borealis): using a molecular approach to detect arthropod prey. Mol Ecol 2009, 18:2532-2542.
    • (2009) Mol Ecol , vol.18 , pp. 2532-2542
    • Clare, E.L.1    Fraser, E.E.2    Braid, H.E.3    Fenton, M.B.4    Hebert, P.D.N.5
  • 19
    • 64749114276 scopus 로고    scopus 로고
    • Public health response to puffer fish (tetrodotoxin) poisoning from mislabeled product
    • Cohen NJ, Deeds JR, Wong ES, Hanner RH, Yancy HF, et al. Public health response to puffer fish (tetrodotoxin) poisoning from mislabeled product. J Food Protection 2009, 72:810-817.
    • (2009) J Food Protection , vol.72 , pp. 810-817
    • Cohen, N.J.1    Deeds, J.R.2    Wong, E.S.3    Hanner, R.H.4    Yancy, H.F.5
  • 21
    • 62849118324 scopus 로고    scopus 로고
    • Identification of net-winged beetle larvae (Coleoptera: Lycidae) using three mtDNA fragments: a comparison of their utility
    • Levkanicova Z, Bocak L. Identification of net-winged beetle larvae (Coleoptera: Lycidae) using three mtDNA fragments: a comparison of their utility. Syst Entomol 2009, 34:210-221.
    • (2009) Syst Entomol , vol.34 , pp. 210-221
    • Levkanicova, Z.1    Bocak, L.2
  • 22
    • 33747401861 scopus 로고    scopus 로고
    • DNA-based identification of preys from non-destructive, total DNA extractions of predators using arthropod universal primers
    • Pons J. DNA-based identification of preys from non-destructive, total DNA extractions of predators using arthropod universal primers. Mol Ecol Notes 6:623-626.
    • Mol Ecol Notes , vol.6 , pp. 623-626
    • Pons, J.1
  • 23
    • 31344458132 scopus 로고    scopus 로고
    • The unholy trinity: taxonomy, species delimitation and DNA barcoding
    • DeSalle R, Egan MG, Siddall M. The unholy trinity: taxonomy, species delimitation and DNA barcoding. Phil Trans Roy Soc Lond B 2005, 36:1905-1916.
    • (2005) Phil Trans Roy Soc Lond B , vol.36 , pp. 1905-1916
    • DeSalle, R.1    Egan, M.G.2    Siddall, M.3
  • 25
    • 33749535839 scopus 로고    scopus 로고
    • DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success
    • Meier R, Shiyany K, Vaidya G, Ng PKL. DNA barcoding and taxonomy in Diptera: a tale of high intraspecific variability and low identification success. Syst Biol 2006, 55:715-728.
    • (2006) Syst Biol , vol.55 , pp. 715-728
    • Meier, R.1    Shiyany, K.2    Vaidya, G.3    Ng, P.K.L.4
  • 26
    • 0023375195 scopus 로고
    • The neighbor-joining method: a new method for reconstructing phylogenetic trees
    • Saitou N, Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 1987, 4:406-25.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 28
    • 55149094327 scopus 로고    scopus 로고
    • CAOS software for use in character-based DNA barcoding
    • Sarkar IN, Planet PJ, DeSalle R. CAOS software for use in character-based DNA barcoding. Mol Ecol Res 2008, 8:1256-1259.
    • (2008) Mol Ecol Res , vol.8 , pp. 1256-1259
    • Sarkar, I.N.1    Planet, P.J.2    DeSalle, R.3
  • 29
    • 33847767178 scopus 로고    scopus 로고
    • A comparison of algorithms for the identification of specimens using DNA barcodes: examples from gymnosperms
    • Little DP, Stevenson DW. A comparison of algorithms for the identification of specimens using DNA barcodes: examples from gymnosperms. Cladistics 2007, 23:1-27.
    • (2007) Cladistics , vol.23 , pp. 1-27
    • Little, D.P.1    Stevenson, D.W.2
  • 30
    • 0034616202 scopus 로고    scopus 로고
    • Species delimitation in systematics: inferring diagnostic differences between species
    • Wiens JJ, Servedio MR. Species delimitation in systematics: inferring diagnostic differences between species. Proc Roy Soc Lond B 2000, 267:631-636.
    • (2000) Proc Roy Soc Lond B , vol.267 , pp. 631-636
    • Wiens, J.J.1    Servedio, M.R.2
  • 31
    • 65349170124 scopus 로고    scopus 로고
    • Identifying sharks with DNA barcodes: assessing the utility of a nucleotide diagnostic approach
    • Wong E, Shivji MS, Hanner RH. Identifying sharks with DNA barcodes: assessing the utility of a nucleotide diagnostic approach. Mol Ecol Res 2009, 9(Suppl 1):243-256.
    • (2009) Mol Ecol Res , vol.9 , Issue.SUPPL. 1 , pp. 243-256
    • Wong, E.1    Shivji, M.S.2    Hanner, R.H.3
  • 32
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 1980, 16:111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 34
    • 25144477008 scopus 로고    scopus 로고
    • Biological identifications of mayflies (Ephemeroptera) using DNA barcodes
    • Ball SL, Hebert PDN, Burian SK, Webb JM. Biological identifications of mayflies (Ephemeroptera) using DNA barcodes. J Nor Amer Benth Soc 2005, 24:508-524.
    • (2005) J Nor Amer Benth Soc , vol.24 , pp. 508-524
    • Ball, S.L.1    Hebert, P.D.N.2    Burian, S.K.3    Webb, J.M.4
  • 35
    • 38149030749 scopus 로고    scopus 로고
    • A phylogenetic study of the 'bombycoid complex' (Lepidoptera) using five protein-coding nuclear genes, with comments on the problem of macrolepidopteran phylogeny
    • Regier JC, Cook CP, Mitter C, Hussey A. A phylogenetic study of the 'bombycoid complex' (Lepidoptera) using five protein-coding nuclear genes, with comments on the problem of macrolepidopteran phylogeny. Syst Entomol 2008, 33:175-189.
    • (2008) Syst Entomol , vol.33 , pp. 175-189
    • Regier, J.C.1    Cook, C.P.2    Mitter, C.3    Hussey, A.4
  • 36
    • 33751313616 scopus 로고    scopus 로고
    • An inexpensive, automation-friendly protocol for recovering high-quality DNA
    • Ivanova NV, DeWaard JR, Hebert PDN. An inexpensive, automation-friendly protocol for recovering high-quality DNA. Mol Ecol Notes 2006, 6:998-1002.
    • (2006) Mol Ecol Notes , vol.6 , pp. 998-1002
    • Ivanova, N.V.1    DeWaard, J.R.2    Hebert, P.D.N.3
  • 39
    • 65349140121 scopus 로고    scopus 로고
    • Integration of DNA barcoding into an ongoing inventory of complex tropical biodiversity
    • Janzen D, Hallwachs W, Blandin P, Burns JM, Cadiou J-M, et al. Integration of DNA barcoding into an ongoing inventory of complex tropical biodiversity. Mol Ecol Res 2009, 9:1-25.
    • (2009) Mol Ecol Res , vol.9 , pp. 1-25
    • Janzen, D.1    Hallwachs, W.2    Blandin, P.3    Burns, J.M.4    Cadiou, J.-M.5
  • 40
    • 41849149675 scopus 로고    scopus 로고
    • Testing the reliability of genetic methods of species identification via simulation
    • Ross HA, Murugan S, Li WLS. Testing the reliability of genetic methods of species identification via simulation. Syst Biol 2008, 57:216-230.
    • (2008) Syst Biol , vol.57 , pp. 216-230
    • Ross, H.A.1    Murugan, S.2    Li, W.L.S.3
  • 42
    • 0034897930 scopus 로고    scopus 로고
    • Phylogenetic relationships and evolution of hostplant use in Sphingidae (Lepidoptera): initial evidence from two nuclear genes
    • Regier JC, Mitter C, Friedlander TP, Peigler RS. Phylogenetic relationships and evolution of hostplant use in Sphingidae (Lepidoptera): initial evidence from two nuclear genes. Mol Phyl Evol 2001, 20:311-316.
    • (2001) Mol Phyl Evol , vol.20 , pp. 311-316
    • Regier, J.C.1    Mitter, C.2    Friedlander, T.P.3    Peigler, R.S.4
  • 43
    • 33845914892 scopus 로고    scopus 로고
    • A genomic perspective on the shortcomings of mitochondrial DNA for "barcoding" identification
    • Rubinoff D, Cameron S, Will K. A genomic perspective on the shortcomings of mitochondrial DNA for "barcoding" identification. Journal of Heredity 2006, 97(6):581-594.
    • (2006) Journal of Heredity , vol.97 , Issue.6 , pp. 581-594
    • Rubinoff, D.1    Cameron, S.2    Will, K.3
  • 44
    • 29144473686 scopus 로고    scopus 로고
    • DNA barcoding: error rates based on comprehensive sampling
    • Meyer CP, Paulay G. DNA barcoding: error rates based on comprehensive sampling. PloS Biology 2005, 3:e422.
    • (2005) PloS Biology , vol.3
    • Meyer, C.P.1    Paulay, G.2
  • 45
    • 33744933424 scopus 로고    scopus 로고
    • Will DNA barcoding advance efforts to conserve biodiversity more efficiently than traditional taxonomic methods?
    • Vogler AP. Will DNA barcoding advance efforts to conserve biodiversity more efficiently than traditional taxonomic methods?. Front Ecol Environ 2006, 4:270-272.
    • (2006) Front Ecol Environ , vol.4 , pp. 270-272
    • Vogler, A.P.1
  • 47
    • 33751005843 scopus 로고    scopus 로고
    • Phylogeny, historical biogeography, and taxonomic ranking of Parnassiinae (Lepidoptera, Papilionidae) based on morphology and seven genes
    • Nazari V, Zakharov EV, Sperling FAH. Phylogeny, historical biogeography, and taxonomic ranking of Parnassiinae (Lepidoptera, Papilionidae) based on morphology and seven genes. Mol Phyl Evol 2007, 42:131-156.
    • (2007) Mol Phyl Evol , vol.42 , pp. 131-156
    • Nazari, V.1    Zakharov, E.V.2    Sperling, F.A.H.3
  • 48
    • 0033594952 scopus 로고    scopus 로고
    • Proposal for a standardized temporal scheme of biological classification for extant species
    • Avise JC, Johns GC. Proposal for a standardized temporal scheme of biological classification for extant species. Proc Nat Acad Sci USA 1999, 96:7358-7363.
    • (1999) Proc Nat Acad Sci USA , vol.96 , pp. 7358-7363
    • Avise, J.C.1    Johns, G.C.2
  • 49
    • 0036058990 scopus 로고    scopus 로고
    • The phylogenetic relationships of Morgan's Sphinx, Xanthopan morganii (Walker), the tribe Acherontiini, and allied long-tongued hawkmoths (Lepidoptera: Sphingidae, Sphinginae)
    • Kitching IJ. The phylogenetic relationships of Morgan's Sphinx, Xanthopan morganii (Walker), the tribe Acherontiini, and allied long-tongued hawkmoths (Lepidoptera: Sphingidae, Sphinginae). Zoo J Lin Soc 2002, 135:471-527.
    • (2002) Zoo J Lin Soc , vol.135 , pp. 471-527
    • Kitching, I.J.1
  • 50
    • 0001812263 scopus 로고
    • A revision of the lepidopterous family Sphingidae
    • Rothschild LW, Jordan K. A revision of the lepidopterous family Sphingidae. Novitates Zoologicae 1903, 9(suppl):1-972.
    • (1903) Novitates Zoologicae , vol.9 , Issue.SUPPL , pp. 1-972
    • Rothschild, L.W.1    Jordan, K.2
  • 51
    • 15744391707 scopus 로고    scopus 로고
    • A molecular phylogeny of the hawkmoth genus Hyles (Lepidoptera: Sphingidae, Macroglossinae)
    • Hundsdoerfer AK, Kitching IJ, Wink M. A molecular phylogeny of the hawkmoth genus Hyles (Lepidoptera: Sphingidae, Macroglossinae). Mol Phyl Evol 2005, 35:442-458.
    • (2005) Mol Phyl Evol , vol.35 , pp. 442-458
    • Hundsdoerfer, A.K.1    Kitching, I.J.2    Wink, M.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.