Methylation of the pseudogene PTENP1 5′-terminal region in endometrial cancer and hyperplasia

Russian Journal of Bioorganic Chemistry

Volumn 39, Issue 4, 2013, Pages 397-405

  Kovalenko, T F ^a   Sorokina, A V ^b   Ozolinya, L A ^c   Patrushev, L I ^a  

^a SHEMYAKIN OVCHINNIKOV INSTITUTE OF BIOORGANIC CHEMISTRY   (Russian Federation)

^b FEDERAL RESEARCH AND CLINICAL CENTER OF PHYSICAL CHEMICAL MEDICINE OF FEDERAL MEDICAL BIOLOGICAL AGENCY   (Russian Federation)

^c PIROGOV RUSSIAN NATIONAL RESEARCH MEDICAL UNIVERSITY   (Russian Federation)

Author keywords

ceRNAs; competing endogenous mRNAs; DNA methylation; endometrial cancer; m5C; pseudogene; PTEN; PTENP1

Indexed keywords

EID: 84880841919     PISSN: 10681620     EISSN: None     Source Type: Journal    
DOI: 10.1134/S1068162013040109     Document Type: Conference Paper

References (27)

1. Moffat, M.; Reddington, J.P.; Pennings, S. and Meehan, R.R.; in DNA Methylation-From Genomics to Technology, Tatarinova, T. and Kerton, O.; Eds.; Rijeka: InTech, 2012, pp. 119-150.
2. Kovalenko, T.F.; Mol. Med.; 2010, no. 6, pp. 7-17.
3. Cedar, H. and Bergman, Y.; Annu. Rev. Biochem.; 2012, vol. 81, pp. 97-117.
4. Dambacher, S.; Hahn, M.; and Schotta, G.; Heredity, 2010, vol. 105, pp. 24-37.
5. Gasser, S.M. and Li, E.; Epigenetics and Disease. Pharmaceutical Opportunities (Progress in Drug Research), Basel: Springer, 2011.
6. Robinson, G.; Parker, M.; Kranenburg, T.A.; Lu, C.; Chen, X.; Ding, L.; Phoenix, T.N.; Hedlund, E.; Wei, L.; Zhu, X.; Chalhoub, N.; Baker, S.J.; Huether, R.; Kriwacki, R.; Curley, N.; Thiruvenkatam, R.; Wang, J.; Wu, G.; Rusch, M.; Hong, X.; Becksfort, J.; Gupta, P.; Ma, J.; Easton, J.; Vadodaria, B.; Onar-Thomas, A.; Lin, T.; Li, S.; Pounds, S.; Paugh, S.; Zhao, D.; Kawauchi, D.; Roussel, M.F.; Finkelstein, D.; Ellison, D.W.; Lau, C.C.; Bouffet, E.; Hassall, T.; Gururangan, S.; Cohn, R.; Fulton, R.S.; Fulton, L.L.; Dooling, D.J.; Ochoa, K.; Gajjar, A.; Mardis, E.R.; Wilson, R.K.; Downing, J.R.; Zhang, J.; and Gilbertson, R.J.; Nature, 2012, vol. 488, pp. 43-48.
7. Grasso, C.S.; Wu, Y.-M.; Robinson, D.R.; Cao, X.; Dhanasekaran, S.M.; Khan, A.P.; Quist, M.J.; Jing, X.; Lonigro, R.J.; Brenner, J.C.; Asangani, I.A.; Ateeq, B.; Chun, S.Y.; Siddiqui, J.; Sam, L.; Anstett, M.; Mehra, R.; Prensner, J.R.; Palanisamy, N.; Ryslik, G.A.; Vandin, F.; Raphael, B.J.; Kunju, L.P.; Rhodes, D.R.; Pienta, K.J.; Chinnaiyan, A.M.; and Tomlins, S.A.; Nature, 2012, vol. 487, pp. 239-243.
8. Kanwal, R. and Gupta, S.; J. Appl. Physiol.; 2010, vol. 109, pp. 598-605.
9. Kovalenko, T.F.; Vanusheva, O.V.; Shilov, I.A.; Sosin, D.V.; Sukhoverkhova, A.S.; Kozlova, T.V.; Bokarev, I.N.; Sorokina, A.V.; Ozolinya, L.A.; and Patrushev, L.I.; Russ. J. Bioorg. Chem.; 2006, vol. 33, pp. 414-423.
10. Mueller, S.; Phillips, J.; Onar-Thomas, A.; Romero, E.; Zheng, S.; Wiencke, J.K.; McBride, S.M.; Cowdrey, C.; Prados, M.D.; Weiss, W.A.; Berger, M.S.; Gupta, N.; and Haas-Kogan, D.A.; Neuro Oncol.; 2012, vol. 14, pp. 1146-1152.
11. Rizvi, M.M.; Alam, M.S.; Ali, A.; Mehdi, S.J.; Batra, S.; and Mandal, A.K.; J. Cancer Res. Clin. Oncol.; 2011, vol. 137, pp. 1255-1262.
12. Fan, X.; Chen, B.; Xu, J.; Zhang, H.; Deng, F.; and Xiang, X.; Mol. Med. Report, 2010, vol. 3, pp. 775-779.
13. Muggerud, A.A.; Ronneberg, J.A.; Warnberg, F.; Botling, J.; Busato, F.; Jovanovic, J.; Solvang, H.; Bukholm, I.; Borresen-Dale, A.L.; Kristensen, V.N.; Sorlie, T.; and Tost, J.; Breast Cancer Res.; 2010, vol. 12, no. 1, p. R3.
14. Mirmohammadsadegh, A.; Marini, A.; Nambiar, S.; Hassan, M.; Tannapfel, A.; Ruzicka, T.; and Hengge, U.R.; Cancer Res.; 2006, vol. 66, pp. 6546-6552. (Pubitemid 44085609)
15. Hesson, L.B.; Packham, D.; Pontzer, E.; Funchain, P.; Eng, C.; and Ward, R.L.; Biol. Proced. Online, 2012, vol. 14, p. 5.
16. Zysman, M.A.; Chapman, W.B.; and Bapat, B.; Am. J. Pathol.; 2002, vol. 160.
17. Fujii, G.H.; Morimoto, A.M.; Berson, A.E.; and Bolen, J.B.; Oncogene, 1999, vol. 18, pp. 1765-1769.
18. Poliseno, L.; Salmena, L.; Zhang, J.; Carver, B.; Haveman, W.J.; and Pandolfi, P.P.; Nature, 2010, vol. 465, pp. 1033-1040.
19. Salmena, L.; Poliseno, L.; Tay, Y.; Kats, L.; and Pandolfi, P.P.; Cell, 2011, vol. 146, pp. 353-358.
20. Tay, Y.; Kats, L.; Salmena, L.; Weiss, D.; Tan, S.M.; Ala, U.; Karreth, F.; Poliseno, L.; Provero, P.; Di Cunto, F.; Lieberman, J.; Rigoutsos, I.; and Pandolfi, P.P.; Cell, 2011, vol. 147, pp. 344-357.
21. Karreth, F.A.; Tay, Y.; Perna, D.AlaU.; Tan, S.M.; Rust, A.G.; DeNicola, G.; Webster, K.A.; Weiss, D.; Perez-Mancera, P.A.; Krauthammer, M.; Halaban, R.; Provero, P.; Adams, D.J.; Tuveson, D.A.; and Pandolfi, P.P.; Cell, 2011, vol. 147, pp. 382-395.
22. Poliseno, L.; Haimovic, A.; Christos, P.J.; Vega, Y.; Saenz de Miera E.C.; Shapiro, R.; Pavlick, A.; Berman, R.S.; Darvishian, F.; and Osman, I.; J. Invest. Dermatol.; 2011, vol. 131, pp. 2497-2500.
23. Fraga, M.F. and Esteller, M.; BioTechniques, 2002, vol. 33, pp. 632-649.
24. Shanmuganathan, R.; Basheer, N.B.; Amirthalingam, L.; Muthukumar, H.; Kaliaperumal, R.; and Shanmugam, K.; J. Mol. Diagn.; 2013, vol. 15, pp. 17-26.
25. Xiong, Z. and Laird, P.W.; Nucleic Acids Res.; 1997, vol. 25, pp. 2532-2534. (Pubitemid 27303718)
26. Marsit, C.J.; Zheng, S.; Aldape, K.; Hinds, P.W.; Nelson, H.H.; Wiencke, J.K.; and Kelsey, K.T.; Hum. Pathol.; 2005, vol. 36, pp. 768-776. (Pubitemid 41112032)
27. Patrushev, L.I.; Valyaev, A.G.; Golovchenko, P.A.; Vinogradov, S.V.; Chikindas, M.L.; and Kiselev, V.I.; Mol. Biol.; 1993, vol. 27, pp. 681-688.