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Volumn 117, Issue 29, 2013, Pages 6171-6184

Temperature-dependent conformations of a membrane supported zinc porphyrin tweezer by 2D fluorescence spectroscopy

Author keywords

[No Author keywords available]

Indexed keywords

2D-FLUORESCENCE SPECTROSCOPY; CENTER WAVELENGTH; EQUILIBRIUM CONFORMATION; LINEAR ABSORBANCE; MOLECULAR ASSEMBLY; TEMPERATURE DEPENDENT; TETRAPHENYL PORPHYRINS; THERMODYNAMIC FACTORS;

EID: 84880765734     PISSN: 10895639     EISSN: 15205215     Source Type: Journal    
DOI: 10.1021/jp400394z     Document Type: Article
Times cited : (26)

References (37)
  • 1
    • 0004172764 scopus 로고
    • 2 ed. John Wiley & Sons: New York
    • Tanford, C. The Hydrophobic Effect, 2 ed.; John Wiley & Sons: New York, 1980; p 233.
    • (1980) The Hydrophobic Effect , pp. 233
    • Tanford, C.1
  • 3
    • 0001666112 scopus 로고
    • Entropy Changes Accompanying Association Reactions of Proteins
    • Steinberg, I. Z.; Scheraga, H. A. Entropy Changes Accompanying Association Reactions of Proteins J. Biol. Chem. 1963, 238, 172-181
    • (1963) J. Biol. Chem. , vol.238 , pp. 172-181
    • Steinberg, I.Z.1    Scheraga, H.A.2
  • 4
    • 0024745871 scopus 로고
    • The Price of Lost Freedom: Entropy of Bimolecular Complex Formation
    • Finkelstein, A.; Janin, J. The Price of Lost Freedom: Entropy of Bimolecular Complex Formation Protein Eng. 1989, 3, 1-3
    • (1989) Protein Eng. , vol.3 , pp. 1-3
    • Finkelstein, A.1    Janin, J.2
  • 5
    • 0000702066 scopus 로고    scopus 로고
    • Control of Aggregation and Tuning of the Location of Porphyrins in Synthetic Membranes as Mimics for Cytochrome P450
    • Schenning, A. P. H. J.; Hubert, D. H. W.; Feiters, M. C.; Nolte, R. J. M. Control of Aggregation and Tuning of the Location of Porphyrins in Synthetic Membranes as Mimics for Cytochrome P450 Langmuir 1996, 12, 1572-1577
    • (1996) Langmuir , vol.12 , pp. 1572-1577
    • Schenning, A.P.H.J.1    Hubert, D.H.W.2    Feiters, M.C.3    Nolte, R.J.M.4
  • 6
    • 34347235771 scopus 로고    scopus 로고
    • From "simple" DNA-Protein Interactions to the Macromolecular Machines of Gene Expression
    • von Hippel, P. H. From "Simple" DNA-Protein Interactions to the Macromolecular Machines of Gene Expression Annu. Rev. Biophys. Biomol. Struct. 2007, 36, 79-105
    • (2007) Annu. Rev. Biophys. Biomol. Struct. , vol.36 , pp. 79-105
    • Von Hippel, P.H.1
  • 7
    • 0028210087 scopus 로고
    • Protein-DNA Recognition: New Perspectives and Underlying Themes
    • von Hippel, P. H. Protein-DNA Recognition: New Perspectives and Underlying Themes Science 1994, 263, 769-770
    • (1994) Science , vol.263 , pp. 769-770
    • Von Hippel, P.H.1
  • 8
    • 23444450909 scopus 로고
    • Coupling of Local Folding to Site-Specific Binding of Proteins to DNA
    • Spolar, R. S.; Record, M. T. Coupling of Local Folding to Site-Specific Binding of Proteins to DNA Science 1994, 263, 777-784
    • (1994) Science , vol.263 , pp. 777-784
    • Spolar, R.S.1    Record, M.T.2
  • 9
    • 78149234446 scopus 로고    scopus 로고
    • Changes at the Primer-Template Junction Regulate the Fidelity of Replication by DNA Polymerase
    • Datta, K.; Johnson, N. P.; von Hippel, P. H.; Conformational, D. N. A. Changes at the Primer-Template Junction Regulate the Fidelity of Replication by DNA Polymerase Proc. Natl. Acad. Sci. 2010, 107, 17980-17985
    • (2010) Proc. Natl. Acad. Sci. , vol.107 , pp. 17980-17985
    • Datta, K.1    Johnson, N.P.2    Von Hippel, P.H.3    Conformational, D.N.A.4
  • 10
    • 0034680547 scopus 로고    scopus 로고
    • (-)-Rhizochalin Is a Dimeric Enantiomorphic (2 R)-Sphingolipid. Analysis of Pseudo-C2 Symmetric bis-2-Amino-3-Alkanols by CD
    • Molinski, T. F.; Makarieva, T. N.; Stonik, V. A. (-)-Rhizochalin Is a Dimeric Enantiomorphic (2 R)-Sphingolipid. Analysis of Pseudo-C2 Symmetric bis-2-Amino-3-Alkanols by CD Angew. Chem., Int. Ed. 2000, 39, 4076-4079
    • (2000) Angew. Chem., Int. Ed. , vol.39 , pp. 4076-4079
    • Molinski, T.F.1    Makarieva, T.N.2    Stonik, V.A.3
  • 11
    • 70349947059 scopus 로고    scopus 로고
    • Amplification of Cotton Effects of a Single Chromophore through Liposomal Ordering. Stereochemical Assignment Plakinic Acids (I-J) from Plakortis
    • Dalisay, D. S.; Quach, T.; Nicholas, G. N.; Molinski, T. F. Amplification of Cotton Effects of a Single Chromophore through Liposomal Ordering. Stereochemical Assignment Plakinic Acids (I-J) from Plakortis Angew. Chem., Int. Ed. 2009, 48, 4367-4371
    • (2009) Angew. Chem., Int. Ed. , vol.48 , pp. 4367-4371
    • Dalisay, D.S.1    Quach, T.2    Nicholas, G.N.3    Molinski, T.F.4
  • 12
    • 77950280298 scopus 로고    scopus 로고
    • Liposomal Circular Dichroism. Assignment of Remote Stereocenters in Plakinic Acids K and L from a Plakortis-Xestospongia Sponge Association
    • Dalisay, D. S.; Quach, T.; Molinski, T. F. Liposomal Circular Dichroism. Assignment of Remote Stereocenters in Plakinic Acids K and L from a Plakortis-Xestospongia Sponge Association Org. Lett. 2010, 12, 1524-1527
    • (2010) Org. Lett. , vol.12 , pp. 1524-1527
    • Dalisay, D.S.1    Quach, T.2    Molinski, T.F.3
  • 14
    • 76249103854 scopus 로고    scopus 로고
    • Coherently Wired Light-Harvesting in Photosynthetic Marine Algae at Ambient Temperature
    • Collini, E.; Wong, C. Y.; Wilk, K. E.; Curmi, P. M. G.; Brumer, P.; Scholes, G. D. Coherently Wired Light-Harvesting in Photosynthetic Marine Algae at Ambient Temperature Nature 2010, 463, 644-647
    • (2010) Nature , vol.463 , pp. 644-647
    • Collini, E.1    Wong, C.Y.2    Wilk, K.E.3    Curmi, P.M.G.4    Brumer, P.5    Scholes, G.D.6
  • 15
    • 67649261996 scopus 로고    scopus 로고
    • Coherent Multidimensional Optical Spectroscopy of Excitons in Molecular Aggregates; Quasiparticle Versus Supermolecule Perspectives
    • Abramavicius, D.; Palmieri, B.; Voronine, D. V.; Šanda, F.; Mukamel, S. Coherent Multidimensional Optical Spectroscopy of Excitons in Molecular Aggregates; Quasiparticle Versus Supermolecule Perspectives Chem. Rev. 2009, 109, 2350-2408
    • (2009) Chem. Rev. , vol.109 , pp. 2350-2408
    • Abramavicius, D.1    Palmieri, B.2    Voronine, D.V.3    Šanda, F.4    Mukamel, S.5
  • 16
    • 70349246511 scopus 로고    scopus 로고
    • Two-Dimensional Electronic Spectroscopy of Molecular Aggregates
    • Ginsberg, N. S.; Cheng, Y.-C.; Fleming, G. R. Two-Dimensional Electronic Spectroscopy of Molecular Aggregates Acc. Chem. Res. 2009, 42, 1352-1363
    • (2009) Acc. Chem. Res. , vol.42 , pp. 1352-1363
    • Ginsberg, N.S.1    Cheng, Y.-C.2    Fleming, G.R.3
  • 17
    • 58449086151 scopus 로고    scopus 로고
    • Coherent Intrachain Energy Migration in a Conjugated Polymer at Room Temperature
    • Collini, E.; Scholes, G. D. Coherent Intrachain Energy Migration in a Conjugated Polymer at Room Temperature Science 2009, 323, 369-373
    • (2009) Science , vol.323 , pp. 369-373
    • Collini, E.1    Scholes, G.D.2
  • 19
    • 66349136562 scopus 로고    scopus 로고
    • Two-Quantum Two-Dimensional Fourier Transform Electronic Spectroscopy of Biexcitons in GaAs Quantum Wells
    • Stone, K. W.; Gundogdu, K.; Turner, D. B.; Li, X.; Cundiff, S. T.; Nelson, K. A. Two-Quantum Two-Dimensional Fourier Transform Electronic Spectroscopy of Biexcitons in GaAs Quantum Wells Science 2009, 324, 1169-1173
    • (2009) Science , vol.324 , pp. 1169-1173
    • Stone, K.W.1    Gundogdu, K.2    Turner, D.B.3    Li, X.4    Cundiff, S.T.5    Nelson, K.A.6
  • 20
    • 80053627474 scopus 로고    scopus 로고
    • Conformation of Self-Assembled Porphyrin Dimers in Liposome Vesicles by Phase-Modulation 2D Fluorescence Spectroscopy
    • Lott, G. A.; Perdomo-Ortiz, A.; Utterback, J. K.; Widom, J. R.; Aspuru-Guzik, A.; Marcus, A. H. Conformation of Self-Assembled Porphyrin Dimers in Liposome Vesicles by Phase-Modulation 2D Fluorescence Spectroscopy Proc. Natl. Acad. Sci. 2011, 108, 16521-16526
    • (2011) Proc. Natl. Acad. Sci. , vol.108 , pp. 16521-16526
    • Lott, G.A.1    Perdomo-Ortiz, A.2    Utterback, J.K.3    Widom, J.R.4    Aspuru-Guzik, A.5    Marcus, A.H.6
  • 21
    • 84865974687 scopus 로고    scopus 로고
    • Conformation and Electronic Population Transfer in Membrane-Supported Self-Assembled Porphyrin Dimers by 2D Fluorescence Spectroscopy
    • Perdomo-Ortiz, A.; Widom, J. R.; Lott, G. A.; Aspuru-Guzik, A.; Marcus, A. H. Conformation and Electronic Population Transfer in Membrane-Supported Self-Assembled Porphyrin Dimers by 2D Fluorescence Spectroscopy J. Phys. Chem. B 2012, 116, 10757-10770
    • (2012) J. Phys. Chem. B , vol.116 , pp. 10757-10770
    • Perdomo-Ortiz, A.1    Widom, J.R.2    Lott, G.A.3    Aspuru-Guzik, A.4    Marcus, A.H.5
  • 22
    • 84874516619 scopus 로고    scopus 로고
    • Solution Conformation of 2-Aminopurine (2-AP) Dinucleotide Determined by Ultraviolet 2D Fluorescence Spectroscopy (UV-2D FS)
    • Widom, J. R.; Johnson, N. P.; von Hippel, P. H.; Marcus, A. H. Solution Conformation of 2-Aminopurine (2-AP) Dinucleotide Determined by Ultraviolet 2D Fluorescence Spectroscopy (UV-2D FS) New J. Phys. 2013, 15, 025028-1-16
    • (2013) New J. Phys. , vol.15 , pp. 0250281-02502816
    • Widom, J.R.1    Johnson, N.P.2    Von Hippel, P.H.3    Marcus, A.H.4
  • 23
    • 0031781176 scopus 로고    scopus 로고
    • Zinc Porphyrin Tweezer in Host-Guest Complexation: Determination of Absolute Configurations of Diamines, Amino Acids, and Amino Alcohols by Circular Dichroism
    • Huang, X.; Rickman, B. H.; Borhan, B.; Berova, N.; Nakanishi, K. Zinc Porphyrin Tweezer in Host-Guest Complexation: Determination of Absolute Configurations of Diamines, Amino Acids, and Amino Alcohols by Circular Dichroism J. Am. Chem. Soc. 1998, 120, 6185-6186
    • (1998) J. Am. Chem. Soc. , vol.120 , pp. 6185-6186
    • Huang, X.1    Rickman, B.H.2    Borhan, B.3    Berova, N.4    Nakanishi, K.5
  • 24
    • 0001255839 scopus 로고
    • Porphyrins: Power Chromophores for Structural Studies by Exciton-Coupled Circular Dichroism
    • Matile, S.; Berova, N.; Nakanishi, K.; Novkova, S.; Philipova, I.; Blagoev, B. Porphyrins: Power Chromophores for Structural Studies by Exciton-Coupled Circular Dichroism J. Am. Chem. Soc. 1995, 117, 7021-7022
    • (1995) J. Am. Chem. Soc. , vol.117 , pp. 7021-7022
    • Matile, S.1    Berova, N.2    Nakanishi, K.3    Novkova, S.4    Philipova, I.5    Blagoev, B.6
  • 25
    • 4043077679 scopus 로고    scopus 로고
    • Long-Range Stereo-Relay: Relative and Absolute Configuration of 1, n -Glycols from Circular Dichroism of Liposomal Porphyrin Esters
    • MacMillan, J. B.; Molinski, T. F. Long-Range Stereo-Relay: Relative and Absolute Configuration of 1, n -Glycols from Circular Dichroism of Liposomal Porphyrin Esters J. Am. Chem. Soc. 2004, 126, 9944-9945
    • (2004) J. Am. Chem. Soc. , vol.126 , pp. 9944-9945
    • Macmillan, J.B.1    Molinski, T.F.2
  • 26
    • 36849077106 scopus 로고    scopus 로고
    • Fluorescence-Detected Two-Dimensional Electronic Coherence Spectroscopy by Acousto-Optic Phase Modulation
    • Tekavec, P. F.; Lott, G. A.; Marcus, A. H. Fluorescence-Detected Two-Dimensional Electronic Coherence Spectroscopy by Acousto-Optic Phase Modulation J. Chem. Phys. 2007, 127, 214307
    • (2007) J. Chem. Phys. , vol.127 , pp. 214307
    • Tekavec, P.F.1    Lott, G.A.2    Marcus, A.H.3
  • 27
    • 0042041206 scopus 로고
    • UFF, a Full Periodic Table Force Field for Molecular Mechanics and Molecular Dynamics Simulations
    • Rappé, A. K.; Casewit, C. J.; Colwell, K. S.; Goddard, W. A., III; Skiff, W. M. UFF, a Full Periodic Table Force Field for Molecular Mechanics and Molecular Dynamics Simulations J. Am. Chem. Soc. 1992, 114, 10024-10035
    • (1992) J. Am. Chem. Soc. , vol.114 , pp. 10024-10035
    • Rappé, A.K.1    Casewit, C.J.2    Colwell, K.S.3    Goddard, W.A.4    Skiff, W.M.5
  • 28
    • 4243992753 scopus 로고
    • Application of a Universal Force Field to Metal Complexes
    • Rappé, A. K.; Colwell, K. S.; Casewit, C. J. Application of a Universal Force Field to Metal Complexes Inorg. Chem. 1993, 32, 3438-3450
    • (1993) Inorg. Chem. , vol.32 , pp. 3438-3450
    • Rappé, A.K.1    Colwell, K.S.2    Casewit, C.J.3
  • 29
    • 84880823079 scopus 로고    scopus 로고
    • TURBOMOLE V6.3 2011, a development of University of Karlsruhe and Forschungszentrum Karlsruhe GmbH.
    • TURBOMOLE V6.3 2011, a development of University of Karlsruhe and Forschungszentrum Karlsruhe GmbH (http://www.turbomole.com).
  • 30
  • 31
    • 40949106826 scopus 로고    scopus 로고
    • KNITRO: An Integrated Package for Nonlinear Optimization
    • In; Pillo, G. Roma, M. Springer-Verlag: Berlin, Germany
    • Byrd, R. H.; Nocedal, J.; Waltz, R. A. KNITRO: An Integrated Package for Nonlinear Optimization. In Large-Scale Nonlinear Optimization; Pillo, G.; Roma, M., Ed.; Springer-Verlag: Berlin, Germany, 2006; pp 35-59.
    • (2006) Large-Scale Nonlinear Optimization , pp. 35-59
    • Byrd, R.H.1    Nocedal, J.2    Waltz, R.A.3
  • 32
    • 0002312013 scopus 로고
    • Optical Spectra and Electronic Structure of Porphyrins and Related Rings
    • In; Dolphin, D. Academic Press: New York, Vol.
    • Gouterman, M. Optical Spectra and Electronic Structure of Porphyrins and Related Rings. In The Porphyrins: Physical Chemistry, Part A; Dolphin, D., Ed.; Academic Press: New York, 1979; Vol. III, pp 1-156.
    • (1979) The Porphyrins: Physical Chemistry, Part A , vol.3 , pp. 1-156
    • Gouterman, M.1
  • 33
    • 0034667434 scopus 로고    scopus 로고
    • Effect of Temperature, Pressure and Lipid Acyl Chain Length on the Structure and Phase Behaviour of Phospholipid-Gramicidin Bilayers
    • Zein, M.; Winter, R. Effect of Temperature, Pressure and Lipid Acyl Chain Length on the Structure and Phase Behaviour of Phospholipid-Gramicidin Bilayers Phys. Chem. Chem. Phys. 2000, 2, 4545-4551
    • (2000) Phys. Chem. Chem. Phys. , vol.2 , pp. 4545-4551
    • Zein, M.1    Winter, R.2
  • 34
    • 36549103625 scopus 로고
    • Temperature Dependence of the Low- and High-Frequency Raman Scattering from Liquid Water
    • Walrafen, G. E.; Fisher, M. R.; Hokmabadi, M. S.; Yang, W.-H. Temperature Dependence of the Low- and High-Frequency Raman Scattering from Liquid Water J. Chem. Phys. 1986, 85, 6970-6982
    • (1986) J. Chem. Phys. , vol.85 , pp. 6970-6982
    • Walrafen, G.E.1    Fisher, M.R.2    Hokmabadi, M.S.3    Yang, W.-H.4
  • 36
    • 0342601426 scopus 로고    scopus 로고
    • Protein Attraction in Membranes Induced by Lipid Fluctuations
    • Sintes, T.; Baumgärtner, A. Protein Attraction in Membranes Induced by Lipid Fluctuations Biophys. J. 1997, 73, 2251-2259
    • (1997) Biophys. J. , vol.73 , pp. 2251-2259
    • Sintes, T.1    Baumgärtner, A.2
  • 37
    • 63149185297 scopus 로고    scopus 로고
    • Spectroscopic Studies of Position-Specific DNA ″breathing″ Fluctuations at Replication Forks and Primer-Template Junctions
    • Jose, D.; Datta, K.; Johnson, N. P.; von Hippel, P. H. Spectroscopic Studies of Position-Specific DNA ″Breathing″ Fluctuations at Replication Forks and Primer-Template Junctions Proc. Natl. Acad. Sci. 2009, 106, 4231-4236
    • (2009) Proc. Natl. Acad. Sci. , vol.106 , pp. 4231-4236
    • Jose, D.1    Datta, K.2    Johnson, N.P.3    Von Hippel, P.H.4


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