Expression, reconstruction and characterization of codon-optimized carbonic anhydrase from Hahella chejuensis for CO2 sequestration application

Bioprocess and Biosystems Engineering

Volumn 36, Issue 3, 2013, Pages 375-381

  Ki, Mi Ran ^a   Min, Kiha ^a   Kanth, Bashistha Kumar ^a   Lee, Jinwon ^b   Pack, Seung Pil ^a  

^a Korea University   (South Korea)

^b Sogang University   (South Korea)

Author keywords

Alpha type carbonic anhydrase; Characterization; CO2 sequestration; Codon optimization; Hahella chejuensis

Indexed keywords

CODON OPTIMIZATION; ESTERASE ACTIVITIES; HAHELLA CHEJUENSIS; HIGH SALT CONCENTRATION; MARINE MICROORGANISM; PRODUCTION OF; SEQUESTRATION PROCESS; SYNTHETIC GENES;

CALCIUM CARBONATE; CARBONIC ANHYDRASE; CHARACTERIZATION; ESCHERICHIA COLI; OPTIMIZATION; PH EFFECTS;

CARBON DIOXIDE;

CARBONATE DEHYDRATASE; ESTERASE;

ARTICLE; CARBON SEQUESTRATION; CARBONATE DEHYDRATASE GENE; CODON; CONTROLLED STUDY; ENZYME ACTIVE SITE; ENZYME ACTIVITY; ENZYME STABILITY; ENZYME SYNTHESIS; ESCHERICHIA COLI; HAHELLA; HAHELLA CHEJUENSIS; MOLECULAR CLONING; NONHUMAN; PH; PRIORITY JOURNAL; PROCESS OPTIMIZATION; PROTEIN EXPRESSION; TEMPERATURE SENSITIVITY;

CARBON DIOXIDE; CARBONIC ANHYDRASES; CATALYSIS; CATALYTIC DOMAIN; CODON; ESCHERICHIA COLI; ESTERASES; GAMMAPROTEOBACTERIA; HYDROGEN-ION CONCENTRATION; IONS; METALS; PROTEIN FOLDING; RECOMBINANT PROTEINS; TEMPERATURE; ZINC;

ESCHERICHIA COLI; HAHELLA CHEJUENSIS;

EID: 84880254400     PISSN: 16157591     EISSN: 16157605     Source Type: Journal    
DOI: 10.1007/s00449-012-0788-z     Document Type: Article

References (28)

1. Holloway S (2007) Carbon dioxide capture and geological storage. Philos Transact A Math Phys Eng Sci 365(1853):1095-1107
2. Litynski JT, Klara SM, McIlvried HG, Srivastava RD (2006) The United States Department of Energy's Regional Carbon Sequestration Partnerships program: a collaborative approach to carbon management. Environ Int 32(1):128-144
3. Lee SW, Park SB, Jeong SK, Lim KS, Lee SH, Trachtenberg MC (2010) On carbon dioxide storage based on biomineralization strategies. Micron 41(4):273-282
4. Frommer WB (2010) Biochemistry. CO2mmon sense. Science 327(5963):275-276
5. Khalifah RG (1971) The carbon dioxide hydration activity of carbonic anhydrase. I. Stop-flow kinetic studies on the native human isoenzymes B and C. J Biol Chem 246(8):2561-2573
6. + exchange. J Phycol 9(3):273-277
7. Premkumar L, Bageshwar UK, Gokhman I, Zamir A, Sussman JL (2003) An unusual halotolerant alpha-type carbonic anhydrase from the alga Dunaliella salina functionally expressed in Escherichia coli. Protein Expr Purif 28(1):151-157 (Pubitemid 36453190)
8. Premkumar L, Greenblatt HM, Bageshwar UK, Savchenko T, Gokhman I, Sussman JL, Zamir A (2005) Three-dimensional structure of a halotolerant algal carbonic anhydrase predicts halotolerance of a mammalian homolog. Proc Natl Acad Sci USA 102(21):7493-7498 (Pubitemid 40740999)
9. Jeong H, Yim JH, Lee C, Choi SH, Park YK, Yoon SH, Hur CG, Kang HY, Kim D, Lee HH, Park KH, Park SH, Park HS, Lee HK, Oh TK, Kim JF (2005) Genomic blueprint of Hahella chejuensis, a marine microbe producing an algicidal agent. Nucleic Acids Res 33(22):7066-7073 (Pubitemid 43125076)
10. Ntalio F, Link T, Muller WE, Schroder HC, Cui FZ, Wang X, Wiens M (2010) Bioengineering of the silica-polymerizing enzyme silicatein-alpha for a targeted application to hydroxyapatite. Acta Biomater 6(9):3720-3728
11. Wilbur KM, Anderson NG (1948) Electrometric and colorimetric determination of carbonic anhydrase. J Biol Chem 176(1):147-154
12. Verpoorte JA, Mehta S, Edsall JT (1967) Esterase activities of human carbonic anhydrases B and C. J Biol Chem 242(18):4221-4229
13. 3 using purified carbonic anhydrase from indigenous bacterial strains. J Mol Catal B-Enzym 67(1-2):122-128
14. 2 sequestration purposes. Ind Eng Chem Res 46(3):921-926 (Pubitemid 46326567)
15. Venter JC, Remington K, Heidelberg JF, Halpern AL, Rusch D, Eisen JA, Wu D, Paulsen I, Nelson KE, Nelson W, Fouts DE, Levy S, Knap AH, Lomas MW, Nealson K, White O, Peterson J, Hoffman J, Parsons R, Baden-Tillson H, Pfannkoch C, Rogers YH, Smith HO (2004) Environmental genome shotgun sequencing of the Sargasso Sea. Science 304(5667):66-74 (Pubitemid 38451457)
16. Sorensen HP, Mortensen KK (2005) Advanced genetic strategies for recombinant protein expression in Escherichia coli. J Biotechnol 115(2):113-128 (Pubitemid 39656438)
17. Lindskog S (1997) Structure and mechanism of carbonic anhydrase. Pharmacol Ther 74(1):1-20 (Pubitemid 27337350)
18. Innocenti A, Muhlschlegel FA, Hall RA, Steegborn C, Scozzafava A, Supuran CT (2008) Carbonic anhydrase inhibitors: inhibition of the beta-class enzymes from the fungal pathogens Candida albicans and Cryptococcus neoformans with simple anions. Bioorg Med Chem Lett 18(18):5066-5070
19. Viarengo A, Mancinelli G, Pertica M, Fabbri R, Orunesu M (1993) Effects of heavy metals on the Ca(2+)-ATPase activity present in gill cell plasma-membrane of mussels (Mytilus galloprovincialis Lam.). Comp Biochem Physiol C 106(3):655-660 (Pubitemid 24024096)
20. Kupriyanova E, Villarejo A, Markelova A, Gerasimenko L, Zavarzin G, Samuelsson G, Los DA, Pronina N (2007) Extracellular carbonic anhydrases of the stromatolite-forming cyanobacterium Microcoleus chthonoplastes. Microbiology 153(Pt 4):1149-1156 (Pubitemid 46605813)
21. Huang S, Xue Y, Sauer-Eriksson E, Chirica L, Lindskog S, Jonsson BH (1998) Crystal structure of carbonic anhydrase from Neisseria gonorrhoeae and its complex with the inhibitor acetazolamide. J Mol Biol 283(1):301-310 (Pubitemid 28466658)
22. Lewis SM, Corpe WA (1964) Prodigiosin-producing bacteria from marine sources. Appl Microbiol 12:13-17
23. Kim SJ, Lee HK, Yim JH (2008) Statistical optimization of medium components for the production of prodigiosin by Hahella chejuensis KCTC 2396. J Microbiol Biotechnol 18(12):1903-1907
24. Horikoshi K (1999) Alkaliphiles: some applications of their products for biotechnology. Microbiol Mol Biol Rev 63(4):735-750
25. Reinhold L, Volokita M, Zenvirth D, Kaplan A (1984) Is HCO(3) transport in Anabaena a Na symport? Plant Physiol 76(4):1090-1092
26. de Leeuw NH, Parker SC (1998) Surface structure and morphology of calcium carbonate polymorphs calcite, aragonite, and vaterite: an atomistic approach. J Phys Chem B 102(16):2914-2922 (Pubitemid 128576600)
27. Ouhenia S, Chateigner D, Belkhir MA, Guilmeau E, Krauss C (2008) Synthesis of calcium carbonate polymorphs in the presence of polyacrylic acid. J Cryst Growth 310(11):2832-2841
28. Kim IG, Jo BH, Kang DG, Kim CS, Choi YS, Cha HJ (2012) Biomineralization-based conversion of carbon dioxide to calcium carbonate using recombinant carbonic anhydrase. Chemosphere 87(10):1091-1096