Adiabatic eigenfunction-based approach for coherent excitation transfer: An almost analytical treatment of the Fenna-Matthews-Olson complex

Physical Review E - Statistical, Nonlinear, and Soft Matter Physics

Volumn 87, Issue 6, 2013, Pages

  Bhattacharyya, Pallavi ^a   Sebastian, K L ^a  

^a INDIAN INSTITUTE OF SCIENCE   (India)

Author keywords

[No Author keywords available]

Indexed keywords

ANALYTICAL RESULTS; ANALYTICAL TREATMENT; COHERENT EXCITATIONS; LIGHT-HARVESTING; MARKOVIAN MASTER EQUATION; NUMERICAL RESULTS; PIGMENT-PROTEIN COMPLEXES; POPULATION RELAXATION;

EIGENVALUES AND EIGENFUNCTIONS; QUANTUM THEORY;

HAMILTONIANS;

EID: 84879994529     PISSN: 15393755     EISSN: 15502376     Source Type: Journal    
DOI: 10.1103/PhysRevE.87.062712     Document Type: Article

References (47)

1. T. Brixner, J. Stenger, H. Vaswani, M. Cho, R. Blankenship, and G. Fleming, Nature (London) NATUAS 0028-0836 10.1038/nature03429 434, 625 (2005). (Pubitemid 40488551)
2. G. Engel, T. Calhoun, E. Read, T.-K. Ahn, T. Mancal, Y.-C. Cheng, R. Blankenship, and G. Fleming, Nature (London) NATUAS 0028-0836 10.1038/nature05678 446, 782 (2007). (Pubitemid 46582029)
3. E. Read, G. Engel, T. Calhoun, T. Mancal, T. Ahn, R. Blankenship, and G. Fleming, Proc. Natl. Acad. Sci. USA PNASA6 0027-8424 10.1073/pnas.0701201104 104, 14203 (2007). (Pubitemid 350003241)
4. J. A. Leegwater, J. R. Durrant, and D. R. Klug, J. Phys. Chem. B JPCBFK 1520-6106 10.1021/jp9634058 101, 7205 (1997).
5. O. Kuehn and V. Sundstroem, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.474803 107, 4154 (1997).
6. T. Renger and V. May, J. Phys. Chem. A JPCAFH 1089-5639 10.1021/jp9800665 102, 4381 (1998), http://pubs.acs.org/doi/pdf/10.1021/jp9800665.
7. R. Fenna and B. Matthews, Nature (London) NATUAS 0028-0836 10.1038/258573a0 258, 573 (1975).
8. Y.-F. Li, W. Zhou, R. Blankenship, and J. Allen, J. Mol. Biol. JMOBAK 0022-2836 10.1006/jmbi.1997.1189 271, 456 (1997). (Pubitemid 27348510)
9. A. Camara-Artigas, R. Blankenship, and J. Allen, Photosyn. Res. PHRSDI 0166-8595 10.1023/A:1022406703110 75, 49 (2003). (Pubitemid 36333176)
10. G. Panitchayangkoon, D. Hayes, K. Fransted, J. Caram, E. Harel, J. Wen, R. Blankenship, and G. Engel, Proc. Natl. Acad. Sci. USA PNASA6 0027-8424 10.1073/pnas.1005484107 107, 12766 (2010).
11. O. V. Prezhdo and P. J. Rossky, Phys. Rev. Lett. PRLTAO 0031-9007 10.1103/PhysRevLett.81.5294 81, 5294 (1998).
12. J. Gilmore and R. McKenzie, Chem. Phys. Lett. 0009-2614 10.1016/j.cplett.2005.12.104 421, 266 (2006).
13. J. Gilmore and R. H. McKenzie, J. Phys. Chem. A JPCAFH 1089-5639 10.1021/jp710243t 112, 2162 (2008).
14. P. Nalbach, A. Ishizaki, G. R. Fleming, and M. Thorwart, New J. Phys. NJOPFM 1367-2630 10.1088/1367-2630/13/6/063040 13, 063040 (2011).
15. P. Rebentrost, M. Mohseni, and A. Aspuru-Guzik, J. Phys. Chem. B JPCBFK 1520-6106 10.1021/jp901724d 113, 9942 (2009).
16. P. Rebentrost, M. Mohseni, I. Kassal, S. Lloyd, and A. Aspuru-Guzik, New J. Phys. NJOPFM 1367-2630 10.1088/1367-2630/11/3/033003 11, 033003 (2009).
17. D. Abramavicius and S. Mukamel, J. Chem. Phys. 0021-9606 10.1063/1.3458824 133, 064510 (2010).
18. N. Singh, arXiv: 1203.0147v1 [cond-mat.stat-mech] (2012).
19. P. Ball, Nature (London) NATUAS 0028-0836 10.1038/474272a 474, 272 (2011).
20. S. Lloyd, J. Phys. Conf. Ser. 1742-6596 10.1088/1742-6596/302/1/012037 302, 012037 (2011).
21. A. Ishizaki and G. Fleming, Proc. Nat. Acad. Sci. USA PNASA6 0027-8424 10.1073/pnas.0908989106 106, 17255 (2009).
22. A. Ishizaki and G. Fleming, J. Chem. Phys. 0021-9606 10.1063/1.3155372 130, 234111 (2009).
23. M. Mohseni, P. Rebentrost, S. Lloyd, and A. Aspuru-Guzik, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.3002335 129, 174106 (2008).
24. F. Caruso, A. W. Chin, A. Datta, S. F. Huelga, and M. B. Plenio, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.3223548 131, 105106 (2009).
25. A. Olaya-Castro and G. Scholes, Intl. Rev. Phys. Chem. IRPCDL 0144-235X 10.1080/0144235X.2010.537060 30, 49 (2011).
26. P. Nalbach, D. Braun, and M. Thorwart, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.84.041926 84, 041926 (2011).
27. C. Olbrich, J. Strümpfer, K. Schulten, and U. Kleinekathofer, J. Phys. Chem. Lett. 1948-7185 10.1021/jz2007676 2011, 1771 (2011).
28. L. Mühlbacher and U. Kleinekathofer, J. Phys. Chem. B JPCBFK 1520-6106 10.1021/jp301444q 116 3900 (2012).
29. U. Weiss, Quantum Dissipative Systems, 3rd ed., Series in Modern Condensed Matter Physics (World Scientific, Singapore, 2008).
30. P. P. Orth, A. Imambekov, and K. Le Hur, Phys. Rev. A PLRAAN 1050-2947 10.1103/PhysRevA.82.032118 82, 032118 (2010).
31. P. P. Orth, D. Roosen, W. Hofstetter, and K. Le Hur, Phys. Rev. B PLRBAQ 1098-0121 10.1103/PhysRevB.82.144423 82, 144423 (2010).
32. M. Schlosshauer, Decoherence and the Quantum to Classical Transition (Springer, Berlin, 2007).
33. M. Sarovar, Y. C. Cheng, and K. B. Whaley, Phys. Rev. E PLEEE8 1539-3755 10.1103/PhysRevE.83.011906 83, 011906 (2011).
34. A. Ishizaki and G. Fleming, J. Chem. Phys. 0021-9606 10.1063/1.3155372 130, 234111 (2009).
35. M. Baer, Beyond Born-Oppenheimer: Conical Intersections and Electronic Nonadiabatic Coupling Terms (Wiley-Interscience, New York, 2006).
36. W. M. Zhang, T. Meier, V. Chernyak, and S. Mukamel, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.476212 108, 7763 (1998).
37. M. Yang and G. Fleming, Chem. Phys. CMPHC2 0301-0104 10.1016/S0301- 0104(02)00604-3 282, 163 (2002).
38. T. Renger and R. A. Marcus, J. Phys. Chem. A JPCAFH 1089-5639 10.1021/jp026789c 107, 8404 (2003).
39. T. Renger and R. A. Marcus, J. Chem. Phys. JCPSA6 0021-9606 10.1063/1.1470200 116, 9997 (2003).
40. J. Adolphs and T. Renger, Biophys. J. BIOJAU 0006-3495 10.1529/biophysj.105.079483 91, 2778 (2006). (Pubitemid 44526469)
41. P. Nalbach, J. Eckel, and M. Thorwart, New J. Phys. NJOPFM 1367-2630 10.1088/1367-2630/12/6/065043 12, 065043 (2010).
42. C. Olbrich, J. Strümpfer, K. Schulten, and U. Kleinekathofer, J. Phys. Chem. B JPCBFK 1520-6106 10.1021/jp1099514 115, 758 (2011).
43. A. Chin, J. Prior, R. Rosenbach, F. Caycedo-Soler, S. Huelga, and M. Plenio, Nature Phys. 1745-2473 10.1038/nphys2515 9, 113 (2013).
44. V. Tiwari, W. K. Peters, and D. M. Jonas, Proc. Natl. Acad. Sci. USA PNASA6 0027-8424 10.1073/pnas.1211157110 110, 1203 (2013).
45. S. Polyutov, O. Kühn, and T. Pullerits, Chem. Phys. CMPHC2 0301-0104 10.1016/j.chemphys.2011.12.006 394, 21 (2012).
46. N. Christensson, H. Kauffmann, T. Pullerits, and T. Mančal, J. Phys. Chem. B JPCBFK 1520-6106 10.1021/jp304649c 116, 7449 (2012).
47. M. DiVentra, Electrical Transport in Nanoscale Systems (Cambridge University Press, New Delhi, 2008).