pyGenClean: Efficient tool for genetic data clean up before association testing

Bioinformatics

Volumn 29, Issue 13, 2013, Pages 1704-1705

  Lemieux Perreault, Louis Philippe ^a,b   Provost, Sylvie ^a   Legault, Marc André ^b   Barhdadi, Amina ^a   Dubé, Marie Pierre ^a,b  

^a MONTREAL HEART INSTITUTE   (Canada)

^b UNIVERSITÉ DE MONTRÉAL   (Canada)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; COMPUTER PROGRAM; GENETIC ASSOCIATION; GENOTYPING TECHNIQUE; HUMAN; QUALITY CONTROL; STANDARD; STANDARDS;

GENETIC ASSOCIATION STUDIES; GENOTYPING TECHNIQUES; HUMANS; QUALITY CONTROL; SOFTWARE;

EID: 84879944354     PISSN: 13674803     EISSN: 14602059     Source Type: Journal    
DOI: 10.1093/bioinformatics/btt261     Document Type: Conference Paper

References (5)

1. Anderson, C.A. et al. (2010) Data quality control in genetic case-control association studies. Nat. Protoc., 5, 1564-1573.
2. Laurie, C.C. et al. (2010) Quality control and quality assurance in genotypic data for genome-wide association studies. Genet. Epidemiol., 34, 591-602.
3. Purcell, S. et al. (2007) PLINK: A tool set for whole-genome association and population-based linkage analyses. Am. J. Hum. Genet., 81, 559-575.
4. Stevens, E.L. et al. (2011) Inference of relationships in population data using identity-by-descent and identity-by-state. PLoS Genet., 7, e1002287.
5. Turner, S. et al. (2011) Quality control procedures for genome-wide association studies. Curr. Protoc. Hum. Genet., Chapter 1, Unit1 19.