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Volumn 436, Issue 3, 2013, Pages 478-485

Complete genome sequencing and evolutionary analysis of Indian isolates of Dengue virus type 2

Author keywords

Complete genome; DENV 2; Molecular epidemiology; Phylogeny; Selection pressure

Indexed keywords

AMINO ACID; ENVELOPE PROTEIN; VIRUS PROTEIN;

EID: 84879886015     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2013.05.130     Document Type: Article
Times cited : (29)

References (24)
  • 1
    • 0002540391 scopus 로고    scopus 로고
    • Dengue and dengue hemorrhagic fever: its history and resurgence as a global public health problem
    • CAB International, London, D.J. Gubler, G. Kuno (Eds.)
    • Gubler D.J. Dengue and dengue hemorrhagic fever: its history and resurgence as a global public health problem. Dengue and Dengue Hemorrhagic Fever 1997, 1-22. CAB International, London. D.J. Gubler, G. Kuno (Eds.).
    • (1997) Dengue and Dengue Hemorrhagic Fever , pp. 1-22
    • Gubler, D.J.1
  • 3
    • 0034054286 scopus 로고    scopus 로고
    • Evolutionary relationships of endemic/epidemic and sylvatic dengue viruses
    • Wang E., Ni H., Xu R., et al. Evolutionary relationships of endemic/epidemic and sylvatic dengue viruses. J. Virol. 2000, 74:3227-3234.
    • (2000) J. Virol. , vol.74 , pp. 3227-3234
    • Wang, E.1    Ni, H.2    Xu, R.3
  • 4
    • 68749092166 scopus 로고    scopus 로고
    • Molecular evolution of dengue viruses: contributions of phylogenetics to understanding the history and epidemiology of the preeminent arboviral disease
    • Weaver S.C., Vasilakis N. Molecular evolution of dengue viruses: contributions of phylogenetics to understanding the history and epidemiology of the preeminent arboviral disease. Infect. Genet. Evol. 2009, 9:523-540.
    • (2009) Infect. Genet. Evol. , vol.9 , pp. 523-540
    • Weaver, S.C.1    Vasilakis, N.2
  • 5
    • 0025116324 scopus 로고
    • Flavivirus genome organization, expression and replication
    • Chambers T.J., Hahn C.S., Galler R., et al. Flavivirus genome organization, expression and replication. Annu. Rev. Microbiol. 1990, 44:649-688.
    • (1990) Annu. Rev. Microbiol. , vol.44 , pp. 649-688
    • Chambers, T.J.1    Hahn, C.S.2    Galler, R.3
  • 6
    • 0023818748 scopus 로고
    • Pathogenesis of dengue: challenges to molecular biology
    • Halstead S.B. Pathogenesis of dengue: challenges to molecular biology. Science 1988, 239:476-481.
    • (1988) Science , vol.239 , pp. 476-481
    • Halstead, S.B.1
  • 7
    • 0033838835 scopus 로고    scopus 로고
    • Dengue viral infections; pathogenesis and epidemiology
    • McBride W.J.H., Bielefeldt-Ohmann H. Dengue viral infections; pathogenesis and epidemiology. Microbes Infect. 2000, 2:1041-1050.
    • (2000) Microbes Infect. , vol.2 , pp. 1041-1050
    • McBride, W.J.H.1    Bielefeldt-Ohmann, H.2
  • 8
    • 84876804736 scopus 로고    scopus 로고
    • The global distribution and burden of dengue
    • Bhatt S., Gething P.W., Brady O.J., et al. The global distribution and burden of dengue. Nature 2013, 10.1038/nature12060.
    • (2013) Nature
    • Bhatt, S.1    Gething, P.W.2    Brady, O.J.3
  • 9
    • 76849093577 scopus 로고    scopus 로고
    • Evolution, dispersal and replacement of American genotype dengue type 2 viruses in India (1956-2005): selection pressure and molecular clock analysesJ
    • Kumar S.R., Patil J.A., Cecilia D., et al. Evolution, dispersal and replacement of American genotype dengue type 2 viruses in India (1956-2005): selection pressure and molecular clock analysesJ. Gen. Virol. 2010, 91:707-720.
    • (2010) Gen. Virol. , vol.91 , pp. 707-720
    • Kumar, S.R.1    Patil, J.A.2    Cecilia, D.3
  • 10
    • 0032845438 scopus 로고    scopus 로고
    • The first major outbreak of DHF in Delhi, India
    • Dar L., Broor S., Sengupta S., et al. The first major outbreak of DHF in Delhi, India. Emerg. Infect. Dis. 1999, 5:589-590.
    • (1999) Emerg. Infect. Dis. , vol.5 , pp. 589-590
    • Dar, L.1    Broor, S.2    Sengupta, S.3
  • 11
    • 4344615912 scopus 로고    scopus 로고
    • Emergence and continued circulation of Dengue-2 (Genotype IV) virus strains in northern India
    • Dash P.K., Parida M.M., Saxena P., et al. Emergence and continued circulation of Dengue-2 (Genotype IV) virus strains in northern India. J. Med. Virol. 2004, 74:314-322.
    • (2004) J. Med. Virol. , vol.74 , pp. 314-322
    • Dash, P.K.1    Parida, M.M.2    Saxena, P.3
  • 12
    • 77954995385 scopus 로고    scopus 로고
    • Genetic characterization of dengue virus serotypes causing concurrent infection in an outbreak in Ernakulam, Kerala, South India
    • Anoop M., Issac A., Mathew T., et al. Genetic characterization of dengue virus serotypes causing concurrent infection in an outbreak in Ernakulam, Kerala, South India. Ind. J. Exp. Biol. 2010, 48:849-857.
    • (2010) Ind. J. Exp. Biol. , vol.48 , pp. 849-857
    • Anoop, M.1    Issac, A.2    Mathew, T.3
  • 13
    • 78650972580 scopus 로고    scopus 로고
    • Endurance, refuge, and reemergence of Dengue virus type 2, Puerto Rico, 1986-2007
    • McElroy K.L., Santiago G.A., Lennon N.J., et al. Endurance, refuge, and reemergence of Dengue virus type 2, Puerto Rico, 1986-2007. Emerg. Infect. Dis. 2011, 17:64-71.
    • (2011) Emerg. Infect. Dis. , vol.17 , pp. 64-71
    • McElroy, K.L.1    Santiago, G.A.2    Lennon, N.J.3
  • 14
    • 79959291040 scopus 로고    scopus 로고
    • Comparative complete genome analysis of dengue virus type 3 circulating in India between 2003 and 2008
    • Sharma S., Dash P.K., Agarwal S., et al. Comparative complete genome analysis of dengue virus type 3 circulating in India between 2003 and 2008. J. Gen. Virol. 2011, 92:1595-1600.
    • (2011) J. Gen. Virol. , vol.92 , pp. 1595-1600
    • Sharma, S.1    Dash, P.K.2    Agarwal, S.3
  • 15
    • 84861211302 scopus 로고    scopus 로고
    • Complete genome sequencing and evolutionary analysis of dengue virus serotype 1 isolates from an outbreak in Kerala, South India
    • Anoop M., Mathew A.J., Jayakumar B., et al. Complete genome sequencing and evolutionary analysis of dengue virus serotype 1 isolates from an outbreak in Kerala, South India. Virus Genes 2012, 45:1-13.
    • (2012) Virus Genes , vol.45 , pp. 1-13
    • Anoop, M.1    Mathew, A.J.2    Jayakumar, B.3
  • 16
    • 79957613599 scopus 로고    scopus 로고
    • MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods
    • Tamura K., Peterson D., Peterson N., et al. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 2011, 28:2731-2739.
    • (2011) Mol. Biol. Evol. , vol.28 , pp. 2731-2739
    • Tamura, K.1    Peterson, D.2    Peterson, N.3
  • 17
    • 77957233168 scopus 로고    scopus 로고
    • Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology
    • Delport W., Poon A.F., Frost S.D. Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology. Bioinformatics 2010, 26(2010):2455-2457.
    • (2010) Bioinformatics , vol.26 , Issue.2010 , pp. 2455-2457
    • Delport, W.1    Poon, A.F.2    Frost, S.D.3
  • 18
    • 79955622294 scopus 로고    scopus 로고
    • Highly conserved region 141-168 of the NS1 protein is a new common epitope region of dengue virus
    • Masrinoul P., Diata M.O., Pambudi S., et al. Highly conserved region 141-168 of the NS1 protein is a new common epitope region of dengue virus. Jpn. J. Infect. Dis. 2011, 64:109-115.
    • (2011) Jpn. J. Infect. Dis. , vol.64 , pp. 109-115
    • Masrinoul, P.1    Diata, M.O.2    Pambudi, S.3
  • 19
    • 33745273034 scopus 로고    scopus 로고
    • Structure-based mutational analysis of the NS3 helicase from dengue virus
    • Sampath A., Xu T., Chao A., et al. Structure-based mutational analysis of the NS3 helicase from dengue virus. J. Virol. 2006, 80:6686-6690.
    • (2006) J. Virol. , vol.80 , pp. 6686-6690
    • Sampath, A.1    Xu, T.2    Chao, A.3
  • 20
    • 34250827756 scopus 로고    scopus 로고
    • Identification of residues critical for the interferon antagonist function of Langat virus NS5 reveals a role for the RNA-dependent RNA polymerase domain
    • Park G.S., Morris K.L., Hallett R.G., et al. Identification of residues critical for the interferon antagonist function of Langat virus NS5 reveals a role for the RNA-dependent RNA polymerase domain. J. Virol. 2007, 81:6936-6946.
    • (2007) J. Virol. , vol.81 , pp. 6936-6946
    • Park, G.S.1    Morris, K.L.2    Hallett, R.G.3
  • 21
    • 34548171376 scopus 로고    scopus 로고
    • Evolutionary processes among sylvatic dengue type 2 viruses
    • Vasilakis N., Holmes E.C., Fokam E.B., et al. Evolutionary processes among sylvatic dengue type 2 viruses. J. Virol. 2007, 81:9591-9595.
    • (2007) J. Virol. , vol.81 , pp. 9591-9595
    • Vasilakis, N.1    Holmes, E.C.2    Fokam, E.B.3
  • 22
    • 0025037999 scopus 로고
    • Molecular evolution and distribution of dengue viruses type 1 and 2 in nature
    • Rico-Hesse R. Molecular evolution and distribution of dengue viruses type 1 and 2 in nature. Virology 1990, 174:479-493.
    • (1990) Virology , vol.174 , pp. 479-493
    • Rico-Hesse, R.1
  • 23
    • 0036302085 scopus 로고    scopus 로고
    • Phylogenetic relationships and differential selection pressures among genotypes of dengue-2 virus
    • Twiddy S.S., Farrar J.J., Chau N.V., et al. Phylogenetic relationships and differential selection pressures among genotypes of dengue-2 virus. Virology 2002, 298:63-72.
    • (2002) Virology , vol.298 , pp. 63-72
    • Twiddy, S.S.1    Farrar, J.J.2    Chau, N.V.3
  • 24
    • 27744536928 scopus 로고    scopus 로고
    • Invasion and maintenance of Dengue virus type 2 and type 4 in the Americas
    • Carrington C.V.F., Foster J.E., Pybus O.G., et al. Invasion and maintenance of Dengue virus type 2 and type 4 in the Americas. J. Virol. 2005, 79:14680-14687.
    • (2005) J. Virol. , vol.79 , pp. 14680-14687
    • Carrington, C.V.F.1    Foster, J.E.2    Pybus, O.G.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.