HIV-1 epidemic in Warao Amerindians from Venezuela: Spatial phylodynamics and epidemiological patterns

AIDS

Volumn 27, Issue 11, 2013, Pages 1783-1791

  Villalba, Julian A ^a,b   Bello, Gonzalo ^c   Maes, Mailis ^d   Sulbaran, Yoneira F ^e   Garzaro, Domingo ^e   Loureiro, Carmen L ^e   Rangel, Hector R ^e   De Waard, Jacobus H ^d   Pujol, Flor H ^e  

^a Dirección Regional de Salud Estado Delta Amacuro   (Venezuela)

^b LOVELACE RESPIRATORY RESEARCH INSTITUTE   (United States)

^c INSTITUTO OSWALDO CRUZ   (Brazil)

^d Instituto de Biomedicina   (Venezuela)

^e Instituto Venezolano de Investigaciones Cientificas Centro de Microbiologia y Biologia Celular   (Venezuela)

Author keywords

Amerindians; epidemiology; HIV 1; phylogeography

Indexed keywords

HUMAN IMMUNODEFICIENCY VIRUS ANTIBODY;

ADOLESCENT; ADULT; AMERICAN INDIAN; ARTICLE; CHILD; CROSS-SECTIONAL STUDY; DYNAMICS; EPIDEMIC; FEMALE; HUMAN; HUMAN IMMUNODEFICIENCY VIRUS 1 INFECTION; MAJOR CLINICAL STUDY; MALE; PHYLOGENY; PREVALENCE; PRIORITY JOURNAL; SCHOOL CHILD; SEQUENCE ANALYSIS; SEX DIFFERENCE; SPATIOTEMPORAL ANALYSIS; VENEZUELA; VIROGENESIS; VIRUS TRANSMISSION;

ADOLESCENT; ADULT; CHILD; CLUSTER ANALYSIS; EPIDEMICS; FEMALE; GENOTYPE; HIV INFECTIONS; HIV-1; HUMANS; INDIANS, SOUTH AMERICAN; MALE; MIDDLE AGED; MOLECULAR EPIDEMIOLOGY; MOLECULAR SEQUENCE DATA; PHYLOGEOGRAPHY; POL GENE PRODUCTS, HUMAN IMMUNODEFICIENCY VIRUS; PREVALENCE; SEQUENCE ANALYSIS, DNA; VENEZUELA; YOUNG ADULT;

EID: 84879883709     PISSN: 02699370     EISSN: 14735571     Source Type: Journal    
DOI: 10.1097/QAD.0b013e3283601bdb     Document Type: Article

References (30)

1. United Nations Program on HIV/AIDS (UNAIDS), World Health Organization (WHO). Global Report: UNAIDS Report on the Global AIDS Epidemic 2010. Geneva, Switzerland: UNAIDS/ WHO; 2010.
2. República Bolivariana de Venezuela. Informe Nacional Relativo a los Avances en la Implementación de La Declaración de Compromisos sobre VIH/SIDA (2001) y Declaración Pol?́tica VIH/SIDA(2006). Caracas 2010. URL: http://www.unaids.org/en/dataanalysis/ monitoringcountryprogress/2010progressreportssubmittedbycountries/ venezuela-2010-country-progress-report-es.pdf. http://www.unaids.org/en/ dataanalysis/monitoringcountryprogress/2010progressreportssubmittedbycountries/ venezuela-2010-country-progress-report-es.pdf. [Accessed 25 December 2011].
3. Mazin R. From common places to concrete recommendations: HIV among aboriginal and indigenous peoples in the western hemisphere. Desacatos 2011; 35:87-94.
4. Shindo N, Alcantara LC, Van Dooren S, Salemi M, Costa MC, Kashima S, et al. Human retroviruses (HIV and HTLV) in Brazilian Indians: seroepidemiological study and molecular epidemiology of HTLV type 2 isolates. AIDS Res Hum Retroviruses 2002; 18:71-77.
5. Zavaleta C, Fernandez C, Konda K, Valderrama Y, Vermund SH, Gotuzzo E. High prevalence of HIV and syphilis in a remote native community if the Peruvian Amazon. Am J Trop Med Hyg 2007; 76:703-705.
6. Bartlett EC, Zavaleta C, Fernandez C, Razuri H, Vilcarromero S, Vermund SH, Gotuzzo E. Expansion of HIV and syphilis into PeruvianAmazon: a survey of fourcommunities of an indigenous Amazonian ethnic group. Int J Infect Dis 2008; 12:e89-e94.
7. Butler JC, Crengle S, Cheek JE, Leach AJ, Lennon D, O'Brien KL, Santosham M. Emerging infectious diseases among indigenous peoples. Emerg Infect Dis 2001; 7:S554-S555.
8. Rangel HR, Maes M, Villalba J, Sulbarán Y, de Waard JH, Bello G, Pujol FH. Evidence of at least two introductions of HIV-1 in the Amerindian Warao population from Venezuela. PLoS ONE 2012; 7:e40626.
9. Wilbert J. Mystic endowment. Religious ethnography of the Warao Indians. In: Cambridge: Harvard University Center for the Study of World Religions; 1993.
10. Verhagen LM, Warris A, Hermans PW, Del Nogal B, De Groot R, De Waard JH. High prevalence of acute respiratory tract infections among Warao Amerindian children in Venezuela in relation to low immunization coverage and chronic malnutrition. Pediatr Infect Dis J 2012; 31:255-262.
11. Fernández de Larrea C, Fandiño C, López D, del Nogal B, Rodr?́guez N, Convit J, et al. Tuberculosis in subjects under 15 years of age in the population of Warao in Venezuela. Invest Clin 2002; 43:35-48.
12. Instituto Nacional de Estad?́stica. XIII Censo Nacional de Población y Vivienda 2001. Caracas: Instituto Nacional de Estad?́stica; Available from: http://www.ine.gob.ve/poblacion/index.html. 2001. [Accessed 31 August 2012].
13. Pan American Health Organization. Promoción de la salud sexual y prevención del VIH-SIDA y de las ITS en los pueblos ind?́genas de lasAméricas: Abya-Yala Kuyarinakui. Washington. URL: http://www.paho.org/ spanish/ad/fch/ai/ssia06.pdf 1 2003. [Accessed 25 December 2011].
14. Lavandero J. Delta Amacuro: Conferencias, Art?́culos, Documentos y Notas. 1st ed. Caracas: Editions of the Andrés Bello Catholic University/Order of Friars Minor Capuchin; 2010.
15. Ayala-Lafee C, Wilbert W. La mujer Warao: De recolectora deltana a recolectora urbana. Monografia Nro. 51. Caracas: Editions of Caribbean Institute of Anthropology and Sociology, La Salle Foundation for the Natural Sciences; 2008.
16. Guindon S, Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 2003; 52:696-704.
17. Guindon S, Lethiec F, Duroux P, Gascuel O. PHYML Online: a web server for fast maximum likelihood-based phylogenetic inference. Nucleic Acids Res 2005; 33:W557-W559.
18. Posada D. jModelTest: phylogenetic model averaging. Mol Biol Evol 2008; 25:1253-1256.
19. Anisimova M, Gascuel O. Approximate likelihood-ratio test for branches: a fast, accurate, and powerful alternative. Syst Biol 2006; 55:539-552.
20. Drummond AJ, Nicholls GK, Rodrigo AG, Solomon W. Estimating mutation parameters, population history and genealogy simultaneously from temporally spaced sequence data. Genetics 2002; 161:1307-1320.
21. Drummond AJ, Rambaut A. BEAST: Bayesian evolutionary analysis by sampling trees. BMC Evol Biol 2007; 7:214.
22. Drummond AJ, Ho SY, Phillips MJ, Rambaut A. Relaxed phylogenetics and dating with confidence. PLoS Biol 2006; 4:e88.
23. Lemey P, Rambaut A, Drummond AJ, Suchard MA. Bayesian phylogeography finds its roots. PLoS Comput Biol 2009; 5:e1000520.
24. Bielejec F, Rambaut A, Suchard MA, Lemey P. SPREAD: spatial phylogenetic reconstruction of evolutionary dynamics. Bioinformatics 2011; 27:2910-2912.
25. Drummond AJ, Rambaut A, Shapiro B, Pybus OG. Bayesian coalescent inference of past population dynamics from molecular sequences. Mol Biol Evol 2005; 22:1185-1192.
26. Barral B. Mi Batalla de Dios: Reflejos de la Vida y Afanes de un Misionero. 1st ed. Vigo; Editions of the Convent of the Friars Minor Capuchin in Vigo, Spain; 1972.
27. Wilbert J, Layrisse M. Demographic and biological studies of the Warao Indians. Volume 45. Los Angeles: UCLA Latin American Center Publications; 1980.
28. Ministerio del Poder Popular para la Salud. Salud Ind?́gena en Venezuela. Vol. II: Eñapa, Kariña, Mapoyo, Pemón, Pumé, Warao. Caracas: Ediciones de la Dirrección de Salud Ind?́gena, Ministerio del Poder Popular para la Salud/Instituto Caribe de Antropolog?́a y Sociolog?́a, Fundación La Salle; 2007.
29. Robbins KE, Lemey P, Pybus OG, et al. U.S. Human immunodeficiency virus type 1 epidemic: date of origin, population history, and characterization of early strains. J Virol 2003; 77:6359-6366.
30. Hue S, Pillay D, Clewley JP, Pybus OG. Genetic analysis reveals the complex structure of HIV-1 transmission within defined risk groups. Proc Natl Acad Sci U S A 2005; 102:4425-4429. Innovación