Molecular characterisation of Brucella species

OIE Revue Scientifique et Technique

Volumn 32, Issue 1, 2013, Pages 149-162

  Scholz, H C ^a   Vergnaud, G ^b,c  

^a BUNDESWEHR INSTITUTE OF MICROBIOLOGY   (Germany)

^b UNIVERSITÉ PARIS SACLAY   (France)

^c Mission pour la Recherche et l'Innovation Scientifique   (France)

Author keywords

Brucella spp.; Clonal population; High resolution typing assay; Low genetic diversity; Monophyletic genus

Indexed keywords

BRUCELLA;

EID: 84879440168     PISSN: 02531933     EISSN: 16080645     Source Type: Journal    
DOI: 10.20506/rst.32.1.2189     Document Type: Article

References (54)

1. Al Dahouk S., Scholz H.C., Tomaso H., Bahn P., Gollner C, Karges W, Appel B., Hensel A., Neubauer H. & Nockler K. (2010). -Differential phenotypingof Brucella species using a newly developed semi-automated metabolic system. BMC Microbiol., 10,269.
2. Bourg G., O'Callaghan D. & Boschiroli M.L. (2007). - The genomic structure of Brucella strains isolated from marine mammals gives clues to evolutionary history within the genus. Vet. Microbiol, 125 (3-4), 375-380.
3. Bricker B.J., Ewalt D.R. & Hailing S.M. (2003). - Brucella 'HOOF-Prints': strain typing by multi-locus analysis of variable number tandem repeats (VNTRs). BMC Microbiol., 3, 15.
4. Bricker BJ. & Hailing S.M. (1994). - Differentiation of Brucella abortus bv. 1, 2, and 4, Brucella melitensis. Brucella ovis, and Brucella suis bv. 1 by PCR. J. din. Microbiol, 32(11), 2660-2666.
5. Buddie M.B. (1956). - Studies on Brucella ovis (n. sp.), a cause of genital disease of sheep in New Zealand and Australia. J. Hyg. (London), 54 (3), 351-364.
6. Carmichael L.E. & Bruner D.W. (1968). - Characteristics of a newly-recognized species of Brucella responsible for infectious canine abortions. Cornell Vet., 48 (4), 579-592.
7. Cloeckaert A., Verger J.M., Grayon M., Paquet J.Y., Garin-Bastuji B., Foster G. & Godfroid J. (2001). -Classification of Brucella spp. isolated from marine mammals by DNA polymorphism at the omp2 locus. Microbes Infect, 3 (9), 729-738.
8. Cohan EM. (2002). - What are bacterial species? Annu. Rev. Microbiol, 56, 457-487.
9. Corbel M.J. & Brinley Morgan WJ. (1975). - Proposal for minimal standards for descriptions of new species and biotypes of the genus Brucella. Int.J. syst. Bacterid, 25,83-89.
10. Dawson CE., Stubberfield E.J., Perrett L.L., King A.C., Whatmore A.M., Bashiruddin J.B., Stack J.A. & MacMillan A.R (2008). - Phenotypic and molecular characterisation of Brucella isolates from marine mammals. BMC Microbiol., 8, 224.
11. De B.K., Stauffer L, Koylass M.S., Sharp SE., Gee J.E., Helsel L.O., Steigerwalt A.G., Vega R., Clark T.A., Daneshvar M.I., Wilkins P.P. & Whatmore A.M. (2008). -Novel Brucella strain (BOI) associated with a prosthetic breast implant infection. J. clin. Microbiol., 46 (1), 43-49.
12. De Ley J., Mannheim W, Segers R, Lievens A., Denijn M., Vanhoucke M. & Gillis M. (1987). - Ribosomal nbonucleic acid cistron similarities and taxonomic neighborhood of Brucella and CDC group Vd. Int.J. syst. Bacteriol, 37, 35-42.
13. DelVecchio VG., Kapatral V, Redkar R.J., Patra G., Mujer C., Los T., Ivanova N., Anderson L, Bhattacharyya A., Lykidis A., Reznik G., Jablonski L., Larsen N., D'Souza M., Bernal A., Mazur M., Goltsman E., Selkov E., Elzer RH., Hagius S., O'Callaghan D., Letesson J.J., Haselkorn R., Kyrpides N. & Overbeek R. (2002). - The genome sequence of the facultative intracellular pathogen Brucella melitensis. Proc. nati Acad. Sci. USA, 99 (1), 443-448.
14. Eisenberg T., Hamann H.P., Kaim U., Schlez K., Seeger H., Schauerte N., Melzer E, Tomaso H., Scholz H.C., Koylass M.S., Whatmore A.M. & Zschock M. (2012). -Isolation of potentially novel Brucella spp. from frogs. Appi, environ. Microbiol, 78 (10), 3753-3755.
15. Ewalt D.R., Payeur J.B., Martin B.M., Cummins D.R. & Miller WG. (1994). - Characteristics of a Brucella species from a bottlenose dolphin (Tursiops truncatus). J. vet. diagn. Invest., 6 (4), 448-452.
16. Fekete A., Bantle J.A., Hailing S.M. & Stich R.W (1992). - Amplification fragment length polymorphism in Brucella strains by use of polymerase chain reaction with arbitrary primers.J. Bacterial, 174 (23), 7778-7783.
17. Foster G., Osterman B.S., Godfroid J., Jacques I. & Cloeckaert A. (2007). - Brucella ceti sp. nov. and Brucella pinnipediaits sp. nov. for Brucella strains with cetaceans and seals as their preferred hosts. Int. J. syst. evolut. Microbiol, 57 (Pt 11), 2688-2693.
18. Foster J.T., Beckstrom-Stemberg S.M., Pearson T., Beckstrom-Sternberg J.S., Chain P.S., Roberto EE, Hnath J., Brettin T. & Keim P. (2009). - Whole-genome-based phytogeny and divergence of the genus Brucella. J. Bacterial., 191 (8), 2864-2870.
19. Foster J.T., Okinaka R.T., Svensson R., Shaw K., De B.K., Robison R.A., Probert WS., Kenefic L.J., Brown WD. & Keim P. (2008). - Real-time PCR assays of single-nucleotide polymorphisms defining the major Brucella clades. J. din. Microbiol., 46 (1), 296-301.
20. García-Yoldi D., Marin CM., de Miguel M.J., Muñoz RM., Vizmanos J.L. & López-Goñi I. (2006). - Multiplex PCR assay for the identification and differentiation of all Brucella species and the vaccine strains Brucella abortus S19 and RB51 and Brucella melitensis Revi. Clin. Oiem., 52 (4), 779-781.
21. Gee J E., De B.K., Levett RN., Whitney A.M., Novak R.T. & Popovic T. (2004). - Use of 16S rRNA gene sequencing for rapid confirmatory identification of Brucella isolates. J. din. Microbiol, 42 (8), 3649-3654.
22. Gopaul K.K., Koylass M.S., Smith C.J. & Whatmore A.M. (2008). - Rapid identification of Brucella isolates to the species level by real time PCR based single nucleotide polymorphism (SNP) analysis. BMC Microbiol., 8, 86.
23. Glissa I., Bouchon P., Pourcel C. & Vergnaud G. (2008). -On-line resources for bacterial micro-evolution studies using MLVA or CR1SPR typing. Biochimie, 90 (4), 660-668.
24. Hofer E., Revilla-Fernández S., Al Dahouk S., Riehm J.M., Nockler K., Zygmunt M.S., Cloeckaert A., Tomaso H. & Scholz H.C. (2012). - A potential novel Brucella species isolated from mandibular lymph nodes of red foxes in Austria. Vet. Microbiol, 155 (1), 93-99.
25. Hoyer B.H. & McCullough N.B. (1968). - Homologies of deoxyribonucleic acids from Brucella ovis, canine abortion organisms, and other Brucella species. J. Bacterial., 96 (5), 1783-1790.
26. Hoyer B.H. & McCullough N.B. (1968). - Polynucleotide homologies of Brucella deoxyribonucleic acids. J. Bacterial., 95 (2), 444-448.
27. Hubalek Z., Scholz H.C, Sedlacek I., Melzer E, Sanogo Y.O.& Nesvadbova J. (2007). - Brucellosis of the common vole (Microtus arvalis). Vector Borne zoonotic Dis., 7 (4), 679-687.
28. Huddleson l.E (1929). - The differentiation of the species of the genus Brucella. Michigan State College Agricultural Experiment Station Technical Bulletin, 100,1-16.
29. Jacques I., Grayon M. & Verger J.M. (2007). - Oxidative metabolic profiles of Brucella strains isolated from marine mammals: contribution to their species classification. FEMS Microbiol. Lett., 270 (2), 245-249.
30. Jahans K.L., Foster G. & Broughton E.S. (1997). - The characterisation of Brucella strains isolated from marine mammals. Vet. Microbiol, 57 (4), 373-382.
31. Le Flèche P., Jacques I., Grayon M., Al Dahouk S., Bouchon R, Denoeud E, Nockler K., Neubauer H., Guilloteau LA. & Vergnaud G. (2006). - Evaluation and selection of tandem repeat loci for a Brucella MLVA typing assay. BMC Microbiol., 6, 9.
32. López-Goñi L, García-Yoldi D., Marin C.M., de Miguel M.J., Barquero-Calvo E., Guzmán-Verri C, Albert D. & Garin-Bastuji B. (2011). - New Bruce-ladder multiplex PCR assay for the biovar typing of Brucella suis and the discrimination of Brucella suis and Brucella canis. Vet. Microbiol, 154 (1-2), 152-155.
33. Maquart M., Le Flèche P., Foster G., Tryland M., Ramisse E, Djonne B., Al Dahouk S., Jacques I., Neubauer H., Walravens K., Godfroid J., Cloeckaert A. & Vergnaud G. (2009). - MLVA-16 typing of 295 marine mammal Brucella isolates from different animal and geographic origins identifies 7 major groups within Brucella ceti and Brucella pinnipedialis. BMC Microbiol., 9,145.
34. Mayer-Scholl A., Draeger A., Gollner C, Scholz H.C. & Nockler K. (2010). - Advancement of a multiplex PCR for the differentiation of all currently described Brucella species. J. microbiol. Meth., 80 (1), 112-114.
35. Mercier E., Jumas-Bilak E., Allardet-Servent A., O'Callaghan D. & Ramuz M. (1996). - Polymorphism in Brucella strains detected by studying distribution of two short repetitive DNA elements. J. din. Microbiol., 34 (5), 1299-1302.
36. Meyer K E & Shaw E.B. (1920). - A comparison of the morphologic, cultural and biochemical characteristics of B. abortus and B. melitensis from cattle. Studies on the genus Brucella nov. gen. J. infect. Dis., 27, 173-184.
37. O'Callaghan D. & Whatmore A.M. (2011). - Brucella genomics as we enter the multi-genome era. Brief. funct. Genomic Proteomic, 10(6), 334-341.
38. Osterman B. & Moriyón I. (2006). - International Committee on Systematics of Prokaryotes Subcommittee on the Taxonomy of Brucella. Minutes of the meeting, 17 September 2003, Pamplona, Spain, int. J. syst. evoluì. Microbiol., 56,1173-1175.
39. Paulsen I.T., Seshadri R., Nelson K.E., Eisen J.A., Heidelberg J.E, Read T.D., Dodson R.J., Umayam L, Brinkac L.M., Beanan M.J., Daugherty S.C, Deboy R.T., Durkin A.S., Kolonay J.E, Madupu R., Nelson WC, Ayodeji B., Kraul M., Shetty J., Malek J., Van Aken S.E., Riedmuller S., Tettelin H., Gill S.R., White O., Salzberg S.L., Hoover D.L., Lindler L.E., Hailing S.M., Boyle S.M. & Fraser CM. (2002). - The Brucella suis genome reveals fundamental similarities between animal and plant pathogens and symbionts. Proc. nati Acad. Sci. USA, 99 (20), 13148-13153.
40. Schlabritz-Loutsevitch N.E., Whatmore A.M., Quance C.R., Koylass M.S., Cummins L.B., Dick E.J. Jr, Snider C.L., Cappelli D., Ebersole J.L., Nathanielsz P.W & Hubbard G B. (2009). - A novel Brucella isolate in association with two cases of stillbirth in non-human primates - first report. J. med. Prìmatol, 38 (1), 70-73.
41. Scholz H.C, Al Dahouk S., Tomaso H., Neubauer H., Witte A., Schloter M., Kampfer R, Falsen E., Pfeffer M. & Engel M. (2008). - Genetic diversity and phylogenetic relationships of bacteria belonging to the Ochrobactrum-Brucella group by recA and 16S rRNA gene-based comparative sequence analysis. Syst. Appi. Microbiol., 31 (1), 1-16.
42. Scholz H.C., Hubalek Z., Sedlacek I., Vergnaud G., Tomaso H., Al Dahouk S., Melzer E, Kampfer P., Neubauer H., Cloeckaert A., Maquart M., Zygmunt M.S., Whatmore A.M., Falsen E., Bahn E, Gollner C, Pfeffer M., Huber B., Busse H.J. & Nockler K. (2008). - Brucella microti sp. nov., isolated from the common vole Microtus arvalis. Int. J. syst. evoluì. Microbiol., 58 (Pt 2), 375-382.
43. Scholz H.C., Nockler K., Gollner C, Bahn R, Vergnaud G., Tomaso H., Al Dahouk S., Kampfer R, Cloeckaert A., Maquart M., Zygmunt M.S., Whatmore A.M., Pfeffer M., Huber B., Busse H.J. & De B.K. (2010). - Brucella inopinata sp. nov., isolated from a breast implant infection. Int. J. syst. evolut Microbiol, 60 (Pt 4), 801-808.
44. Stoenner H.G. & Lackman D.B. (1957). - A new species of Brucella isolated from the desert wood rat, Neotoma lepida Thomas. Am. J. vet. Res., 18 (69), 947-951.
45. Tcherneva E., Rijpens N., Jersek B. & Herman L.M. (2000). Differentiation of Brucella species by random amplified polymorphic DNA analysis. J. appi. Microbiol, 88 (1), 69-80.
46. Tchemeva E., Rijpens N., Naydensky C. & Herman L. (1996). Repetitive element sequence based polymerase chain reaction for typing of Brucella strains. Vet. Microbiol, 51 (1-2), 169-178.
47. Tiller R.V, Gee J.E., Frace M. A, Taylor T.K., Setubal J.C., Hoffmaster A.R. & De B.K. (2010). - Characterization of novel Brucella strains originating from wild native rodent species in North Queensland, Australia. Appi environ. Microbiol, 76 (17), 5837-5845.
48. Tiller R.V, Gee J.E., Lonsway D.R., Gnbble S., Bell S.C., Jennison A.V, Bates J., Coulter C, Hoffmaster A.R. & De B.K. (2010). - Identification of an unusual Brucella strain (B02) from a lung biopsy in a 52-year-old patient with chronic destructive pneumonia. BMC Microbiol., 10, 23.
49. Valdezate S., Cervera I., Hernandez P, Navarro A. & Saez Nieto J.A. (2007). - Characterisation of human outbreaks of brucellosis and sporadic cases by the use of hyper-variable octameric oligonucleotide fingerprint (HOOF) variable number tandem repeats. Clin. Microbio/. Infect., 13 (9), 887-892.
50. Verger J.-M., Grimont E, Grimont PAD. & Grayon M. (1985). -Brucella, a monospecific genus as shown by deoxyribonucleic acid hybridization. Int. J. syst. Bacterial., 35, 292-295.
51. Whatmore A.M., Perrett L.L. & MacMillan A.R (2007). -Characterisation of the genetic diversity of Brucella by multilocus sequencing. BMC Microbiol., 7, 34.
52. Whatmore A.M., Shankster S.J., Perrett L.L, Murphy T.J., Brew S.D., Thirlwall R.E., Cutler S.J. & MacMillan A.P (2006). - Identification and characterization of variable-number tandem-repeat markers for typing of Brucella spp. J. din. Microbio!., 44 (6), 1982-1993.
53. Yu WL. & Nielsen K. (2010). - Review of detection of Brucella spp. by polymerase chain reaction. Croat, med. J., 51 (4), 306-313.
54. Zygmunt M.S., Maquart M., Bernardet N., Doublet B. & Cloeckaert A. (2010). - Novel 1S711-specific chromosomal locations useful for identification and classification of marine mammal Brucella strains. J. din. Microbiol, 48 (10), 3765-3769.