메뉴 건너뛰기




Volumn 97, Issue 13, 2013, Pages 5869-5880

Role of the cmcH-ccaR intergenic region and ccaR overexpression in cephamycin C biosynthesis in Streptomyces clavuligerus

Author keywords

ccaR; Cephamycin C; Cephamycin C overproducer strains; Streptomyces clavuligerus

Indexed keywords

CCAR; CEPHAMYCIN C; EXPRESSION ANALYSIS; INTERGENIC REGIONS; MESSENGER RNAS (MRNA); REVERSE TRANSCRIPTION PCR; STREPTOMYCES CLAVULIGERUS; TRANSCRIPTION TERMINATORS;

EID: 84879422084     PISSN: 01757598     EISSN: 14320614     Source Type: Journal    
DOI: 10.1007/s00253-013-4721-4     Document Type: Article
Times cited : (17)

References (38)
  • 1
    • 0033817023 scopus 로고    scopus 로고
    • A single amino acid substitution in region 1.2 of the principal sigma factor of Streptomyces coelicolor A3(2) results in pleiotropic loss of antibiotic production
    • 10.1046/j.1365-2958.2000.02022.x 1:CAS:528:DC%2BD3cXmvFSitrk%3D
    • Aigle B, Wietzorrek A, Takano E, Bibb MJ (2000) A single amino acid substitution in region 1.2 of the principal sigma factor of Streptomyces coelicolor A3(2) results in pleiotropic loss of antibiotic production. Mol Microbiol 37:995-1004
    • (2000) Mol Microbiol , vol.37 , pp. 995-1004
    • Aigle, B.1    Wietzorrek, A.2    Takano, E.3    Bibb, M.J.4
  • 2
    • 0033987503 scopus 로고    scopus 로고
    • Early cephamycin biosynthetic genes are expressed from a polycistronic transcript in Streptomyces clavuligerus
    • 10.1128/JB.182.2.348-356.2000 1:CAS:528:DC%2BD3cXivFSgtg%3D%3D
    • Alexander DC, Brumlik MJ, Lee L, Jensen SE (2000) Early cephamycin biosynthetic genes are expressed from a polycistronic transcript in Streptomyces clavuligerus. J Bacteriol 182:348-356
    • (2000) J Bacteriol , vol.182 , pp. 348-356
    • Alexander, D.C.1    Brumlik, M.J.2    Lee, L.3    Jensen, S.E.4
  • 3
    • 0031855642 scopus 로고    scopus 로고
    • Investigation of the Streptomyces clavuligerus cephamycin C gene cluster and its regulation by the CcaR protein
    • 1:CAS:528:DyaK1cXlsVaiu7Y%3D
    • Alexander DC, Jensen SE (1998) Investigation of the Streptomyces clavuligerus cephamycin C gene cluster and its regulation by the CcaR protein. J Bacteriol 180:4068-4079
    • (1998) J Bacteriol , vol.180 , pp. 4068-4079
    • Alexander, D.C.1    Jensen, S.E.2
  • 4
    • 0031214349 scopus 로고    scopus 로고
    • Chemistry and biosynthesis of clavulanic acid and other clavams
    • 10.1039/np9971400309 1:CAS:528:DyaK2sXls1Omt78%3D
    • Baggaley KH, Brown AG, Schofield CJ (1997) Chemistry and biosynthesis of clavulanic acid and other clavams. Nat Prod Rep 14:309-333
    • (1997) Nat Prod Rep , vol.14 , pp. 309-333
    • Baggaley, K.H.1    Brown, A.G.2    Schofield, C.J.3
  • 5
    • 65549168965 scopus 로고    scopus 로고
    • Glycerol utilization gene cluster in Streptomyces clavuligerus
    • 10.1128/AEM.00181-09
    • Baños S, Pérez-Redondo R, Koekman B, Liras P (2009) Glycerol utilization gene cluster in Streptomyces clavuligerus. Appl Environ Microbiol 75(9):2991-2995
    • (2009) Appl Environ Microbiol , vol.75 , Issue.9 , pp. 2991-2995
    • Baños, S.1    Pérez-Redondo, R.2    Koekman, B.3    Liras, P.4
  • 6
    • 77957015641 scopus 로고
    • Determination of DNA concentration with diphenylamine
    • 10.1016/0076-6879(67)12127-7 1:CAS:528:DyaF1MXlsVKksg%3D%3D
    • Burton K (1968) Determination of DNA concentration with diphenylamine. Methods Enzymol 12:163-166
    • (1968) Methods Enzymol , vol.12 , pp. 163-166
    • Burton, K.1
  • 7
    • 77649235913 scopus 로고    scopus 로고
    • How to do successful gene expression analysis using real time PCR
    • 10.1016/j.ymeth.2009.11.001 1:CAS:528:DC%2BC3cXjtVCgurc%3D
    • Derveaux S, Vandesompele J, Hellemans J (2010) How to do successful gene expression analysis using real time PCR. Methods 50:227-230
    • (2010) Methods , vol.50 , pp. 227-230
    • Derveaux, S.1    Vandesompele, J.2    Hellemans, J.3
  • 8
    • 0031572413 scopus 로고    scopus 로고
    • High efficiency intergeneric conjugal transfer of plasmid DNA from Escherichia coli to methyl DNA-restricting streptomycetes
    • 10.1111/j.1574-6968.1997.tb13882.x 1:CAS:528:DyaK2sXmsVKltb0%3D
    • Flett F, Mersinias V, Smith CP (1997) High efficiency intergeneric conjugal transfer of plasmid DNA from Escherichia coli to methyl DNA-restricting streptomycetes. FEMS Microbiol Lett 155:223-229
    • (1997) FEMS Microbiol Lett , vol.155 , pp. 223-229
    • Flett, F.1    Mersinias, V.2    Smith, C.P.3
  • 10
    • 35348922983 scopus 로고    scopus 로고
    • Enhancement of clavulanic acid by replicative and integrative expression of ccaR and cas2 in Streptomyces clavuligerus NRRL3585
    • 1:CAS:528:DC%2BD2sXht1GksL7P
    • Hung TV, Malla S, Park BC, Liou KY, Lee HC, Sohng JK (2007) Enhancement of clavulanic acid by replicative and integrative expression of ccaR and cas2 in Streptomyces clavuligerus NRRL3585. J Ind Microbiol Biotechnol 17(9):1538-1545
    • (2007) J Ind Microbiol Biotechnol , vol.17 , Issue.9 , pp. 1538-1545
    • Hung, T.V.1    Malla, S.2    Park, B.C.3    Liou, K.Y.4    Lee, H.C.5    Sohng, J.K.6
  • 11
    • 33645894476 scopus 로고    scopus 로고
    • Characterization of pbpA and pbp2 encoding penicillin-binding proteins located on the downstream of clavulanic acid gene cluster in Streptomyces clavuligerus
    • 10.1007/s10529-005-6071-5 1:CAS:528:DC%2BD28XjsV2gsL0%3D
    • Ishida K, Hung TV, Liou K, Lee HC, Shin CH, Sohng JK (2006) Characterization of pbpA and pbp2 encoding penicillin-binding proteins located on the downstream of clavulanic acid gene cluster in Streptomyces clavuligerus. Biotechnol Lett 28(6):409-417
    • (2006) Biotechnol Lett , vol.28 , Issue.6 , pp. 409-417
    • Ishida, K.1    Hung, T.V.2    Liou, K.3    Lee, H.C.4    Shin, C.H.5    Sohng, J.K.6
  • 12
    • 4544242286 scopus 로고    scopus 로고
    • Cloning and characterization of a gene encoding the gamma-butyrolactone autoregulator receptor from Streptomyces clavuligerus
    • 10.1007/s00203-004-0697-x 1:CAS:528:DC%2BD2cXmslCisbg%3D
    • Kim HS, Lee YJ, Lee CK, Choi SU, Yeo S, Hwang YI, Yu TS, Kinoshita H, Nihira T (2004) Cloning and characterization of a gene encoding the gamma-butyrolactone autoregulator receptor from Streptomyces clavuligerus. Arch Microbiol 182:44-50
    • (2004) Arch Microbiol , vol.182 , pp. 44-50
    • Kim, H.S.1    Lee, Y.J.2    Lee, C.K.3    Choi, S.U.4    Yeo, S.5    Hwang, Y.I.6    Yu, T.S.7    Kinoshita, H.8    Nihira, T.9
  • 13
    • 0025366086 scopus 로고
    • The beta-lactam biosynthesis genes for isopenicillin N epimerase and deacetoxycephalosporin C synthetase are expressed from a single transcript in Streptomyces clavuligerus
    • 1:CAS:528:DyaK3cXlvVGnu7s%3D
    • Kovacevic S, Tobin MB, Miller JR (1990) The beta-lactam biosynthesis genes for isopenicillin N epimerase and deacetoxycephalosporin C synthetase are expressed from a single transcript in Streptomyces clavuligerus. J Bacteriol 172:3952-3958
    • (1990) J Bacteriol , vol.172 , pp. 3952-3958
    • Kovacevic, S.1    Tobin, M.B.2    Miller, J.R.3
  • 14
    • 78650526727 scopus 로고    scopus 로고
    • Identification of the gene cluster for the dithiolopyrrolone antibiotic holomycin in Streptomyces clavuligerus
    • 10.1073/pnas.1014140107 1:CAS:528:DC%2BC3cXhsVymu7fN
    • Li B, Walsh CT (2010) Identification of the gene cluster for the dithiolopyrrolone antibiotic holomycin in Streptomyces clavuligerus. Proc Nat Acad Sci 107(46):19731-19735
    • (2010) Proc Nat Acad Sci , vol.107 , Issue.46 , pp. 19731-19735
    • Li, B.1    Walsh, C.T.2
  • 17
    • 77955342122 scopus 로고    scopus 로고
    • Morphological differentiation and clavulanic acid formation are affected in a Streptomyces clavuligerus adpA-deleted mutant
    • 10.1099/mic.0.035956-0
    • López-García MT, Santamarta I, Liras P (2010) Morphological differentiation and clavulanic acid formation are affected in a Streptomyces clavuligerus adpA-deleted mutant. Microbiol 156:2354-2365
    • (2010) Microbiol , vol.156 , pp. 2354-2365
    • López-García, M.T.1    Santamarta, I.2    Liras, P.3
  • 18
    • 0024460765 scopus 로고
    • Organization and expression of genes involved in the biosynthesis of antibiotics and other secondary metabolites
    • 10.1146/annurev.mi.43.100189.001133
    • Martín JF, Liras P (1989) Organization and expression of genes involved in the biosynthesis of antibiotics and other secondary metabolites. Ann Rev Microbiol 43:173-206
    • (1989) Ann Rev Microbiol , vol.43 , pp. 173-206
    • Martín, J.F.1    Liras, P.2
  • 20
    • 0032898961 scopus 로고    scopus 로고
    • Evidence that the extracytoplasmic function sigma factor (E) is required for normal cell wall structure in Streptomyces coelicolor A3(2)
    • 1:CAS:528:DyaK1MXitFWntA%3D%3D
    • Paget MS, Chamberlin L, Atrih A, Foster SJ, Buttner MJ (1999) Evidence that the extracytoplasmic function sigma factor (E) is required for normal cell wall structure in Streptomyces coelicolor A3(2). J Bacteriol 181:204-211
    • (1999) J Bacteriol , vol.181 , pp. 204-211
    • Paget, M.S.1    Chamberlin, L.2    Atrih, A.3    Foster, S.J.4    Buttner, M.J.5
  • 21
    • 0029910623 scopus 로고    scopus 로고
    • Molecular analysis of a beta-lactam resistance gene encoded within the cephamycin gene cluster of Streptomyces clavuligerus
    • 1:CAS:528:DyaK28Xms1Wiuro%3D
    • Paradkar AS, Aidoo KA, Wong A, Jensen SE (1996) Molecular analysis of a beta-lactam resistance gene encoded within the cephamycin gene cluster of Streptomyces clavuligerus. J Bacteriol 178:6266-6274
    • (1996) J Bacteriol , vol.178 , pp. 6266-6274
    • Paradkar, A.S.1    Aidoo, K.A.2    Wong, A.3    Jensen, S.E.4
  • 22
    • 0031751106 scopus 로고    scopus 로고
    • The pcd gene encoding piperideine-6-carboxylate dehydrogenase involved in biosynthesis of α-aminoadipic acid is located in the cephamycin cluster of Streptomyces clavuligerus
    • Pérez-Llarena JP, Rodríguez-García A, Enguita FJ, Martín JF, Liras P (1998) The pcd gene encoding piperideine-6-carboxylate dehydrogenase involved in biosynthesis of α-aminoadipic acid is located in the cephamycin cluster of Streptomyces clavuligerus. J Bacteriol 180:4753-4756
    • (1998) J Bacteriol , vol.180 , pp. 4753-4756
    • Pérez-Llarena, J.P.1    Rodríguez-García, A.2    Enguita, F.J.3    Martín, J.F.4    Liras, P.5
  • 23
    • 0030954966 scopus 로고    scopus 로고
    • A regulatory gene (ccaR) required for cephamycin and clavulanic acid production in Streptomyces clavuligerus: Amplification results in overproduction of both beta-lactam compounds
    • Pérez-Llarena FJ, Liras P, Rodríguez-García A, Martín JF (1997a) A regulatory gene (ccaR) required for cephamycin and clavulanic acid production in Streptomyces clavuligerus: amplification results in overproduction of both beta-lactam compounds. J Bacteriol 179:2053-2059
    • (1997) J Bacteriol , vol.179 , pp. 2053-2059
    • Pérez-Llarena, F.J.1    Liras, P.2    Rodríguez-García, A.3    Martín, J.F.4
  • 24
    • 0038998472 scopus 로고    scopus 로고
    • The bla gene of the cephamycin cluster of Streptomyces clavuligerus encodes a class A β-lactamase of low enzymatic activity
    • Pérez-Llarena FJ, Martín JF, Coque JJ, Fuente JL, Galleni M, Frère JM, Liras P (1997b) The bla gene of the cephamycin cluster of Streptomyces clavuligerus encodes a class A β-lactamase of low enzymatic activity. J Bacteriol 179:6035-6040
    • (1997) J Bacteriol , vol.179 , pp. 6035-6040
    • Pérez-Llarena, F.J.1    Martín, J.F.2    Coque, J.J.3    Fuente, J.L.4    Galleni, M.5    Frère, J.M.6    Liras, P.7
  • 25
    • 0028224034 scopus 로고
    • Transcriptional mapping of the genes encoding the early enzymes of the cephamycin biosynthetic pathway of Streptomyces clavuligerus
    • 10.1016/0378-1119(94)90352-2 1:CAS:528:DyaK2cXkt1ymsrs%3D
    • Petrich AK, Leskiw BK, Paradkar AS, Jensen SE (1994) Transcriptional mapping of the genes encoding the early enzymes of the cephamycin biosynthetic pathway of Streptomyces clavuligerus. Gene 142:41-48
    • (1994) Gene , vol.142 , pp. 41-48
    • Petrich, A.K.1    Leskiw, B.K.2    Paradkar, A.S.3    Jensen, S.E.4
  • 26
    • 0026593978 scopus 로고
    • Transcriptional analysis of the isopenicillin N synthase-encoding gene of Streptomyces clavuligerus
    • 10.1016/0378-1119(92)90605-O 1:CAS:528:DyaK38XhvV2jt74%3D
    • Petrich AK, Wu X, Roy KL, Jensen SE (1992) Transcriptional analysis of the isopenicillin N synthase-encoding gene of Streptomyces clavuligerus. Gene 111(1):77-84
    • (1992) Gene , vol.111 , Issue.1 , pp. 77-84
    • Petrich, A.K.1    Wu, X.2    Roy, K.L.3    Jensen, S.E.4
  • 27
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • 10.1093/nar/29.9.e45 1:STN:280:DC%2BD38nis12jtw%3D%3D
    • Pfaffl MW (2001) A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res 29:e45
    • (2001) Nucleic Acids Res , vol.29 , pp. 45
    • Pfaffl, M.W.1
  • 28
    • 84870497706 scopus 로고    scopus 로고
    • Transcriptional analysis and proteomics of the holomycin gene cluster in overproducer mutants of Streptomyces clavuligerus
    • 10.1016/j.jbiotec.2012.09.017 1:CAS:528:DC%2BC38XhvVOjsrbL
    • Robles-Reglero V, Santamarta I, Álvarez-Álvarez R, Martín JF, Liras P (2013) Transcriptional analysis and proteomics of the holomycin gene cluster in overproducer mutants of Streptomyces clavuligerus. J Biotechnol 163:69-76
    • (2013) J Biotechnol , vol.163 , pp. 69-76
    • Robles-Reglero, V.1    Santamarta, I.2    Álvarez-Álvarez, R.3    Martín, J.F.4    Liras, P.5
  • 29
    • 0021685685 scopus 로고
    • Dissociation of cephamycin and clavulanic acid biosynthesis in Streptomyces clavuligerus
    • 10.1007/BF00270593 1:CAS:528:DyaL2MXmtVKrsQ%3D%3D
    • Romero J, Liras P, Martín JF (1984) Dissociation of cephamycin and clavulanic acid biosynthesis in Streptomyces clavuligerus. Appl Microbiol Biotechnol 20:318-325
    • (1984) Appl Microbiol Biotechnol , vol.20 , pp. 318-325
    • Romero, J.1    Liras, P.2    Martín, J.F.3
  • 30
    • 80051576001 scopus 로고    scopus 로고
    • Characterization of DNA-binding sequences for CcaR in the cephamycin-clavulanic acid supercluster of Streptomyces clavuligerus
    • 10.1111/j.1365-2958.2011.07743.x 1:CAS:528:DC%2BC3MXhtFSqtb%2FK
    • Santamarta I, López-García MT, Kurt A, Nárdiz N, Álvarez-Álvarez R, Pérez-Redondo R, Martín JF, Liras P (2011) Characterization of DNA-binding sequences for CcaR in the cephamycin-clavulanic acid supercluster of Streptomyces clavuligerus. Mol Microbiol 81(4):968-981
    • (2011) Mol Microbiol , vol.81 , Issue.4 , pp. 968-981
    • Santamarta, I.1    López-García, M.T.2    Kurt, A.3    Nárdiz, N.4    Álvarez-Álvarez, R.5    Pérez-Redondo, R.6    Martín, J.F.7    Liras, P.8
  • 31
    • 34748813819 scopus 로고    scopus 로고
    • Connecting primary and secondary metabolism: AreB, an IclR-like protein, binds the ARE(ccaR) sequence of S. clavuligerus and modulates leucine biosynthesis and cephamycin C and clavulanic acid production
    • 10.1111/j.1365-2958.2007.05937.x 1:CAS:528:DC%2BD2sXht1Wks7nJ
    • Santamarta I, Lopez-Garcia MT, Pérez-Redondo R, Koekman B, Martín JF, Liras P (2007) Connecting primary and secondary metabolism: AreB, an IclR-like protein, binds the ARE(ccaR) sequence of S. clavuligerus and modulates leucine biosynthesis and cephamycin C and clavulanic acid production. Mol Microbiol 66(2):511-524
    • (2007) Mol Microbiol , vol.66 , Issue.2 , pp. 511-524
    • Santamarta, I.1    Lopez-Garcia, M.T.2    Pérez-Redondo, R.3    Koekman, B.4    Martín, J.F.5    Liras, P.6
  • 32
    • 23744448206 scopus 로고    scopus 로고
    • Different proteins bind to the butyrolactone-receptor protein ARE sequence located upstream of the regulatory ccaR gene of S. clavuligerus
    • 10.1111/j.1365-2958.2005.04681.x 1:CAS:528:DC%2BD2MXpsFClurY%3D
    • Santamarta I, Pérez-Redondo R, Lorenzana LM, Martín JF, Liras P (2005) Different proteins bind to the butyrolactone-receptor protein ARE sequence located upstream of the regulatory ccaR gene of S. clavuligerus. Mol Microbiol 57(4):1175-1176
    • (2005) Mol Microbiol , vol.57 , Issue.4 , pp. 1175-1176
    • Santamarta, I.1    Pérez-Redondo, R.2    Lorenzana, L.M.3    Martín, J.F.4    Liras, P.5
  • 33
    • 0036097237 scopus 로고    scopus 로고
    • CcaR is an autoregulatory protein that binds to the ccaR and cefD-cmcI promoters of the cephamycin C-clavulanic acid cluster in Streptomyces clavuligerus
    • 10.1128/JB.184.11.3106-3113.2002 1:CAS:528:DC%2BD38XjvVGrtr8%3D
    • Santamarta I, Rodríguez-García A, Pérez-Redondo R, Martín JF, Liras P (2002) CcaR is an autoregulatory protein that binds to the ccaR and cefD-cmcI promoters of the cephamycin C-clavulanic acid cluster in Streptomyces clavuligerus. J Bacteriol 184:3106-3113
    • (2002) J Bacteriol , vol.184 , pp. 3106-3113
    • Santamarta, I.1    Rodríguez-García, A.2    Pérez-Redondo, R.3    Martín, J.F.4    Liras, P.5
  • 35
    • 0034746243 scopus 로고    scopus 로고
    • Construction and analysis of ss-lactamase-inhibitory protein (BLIP) non-producer mutants of Streptomyces clavuligerus
    • 1:CAS:528:DC%2BD3MXhtlWmtr4%3D
    • Thai W, Paradkar AS, Jensen SE (2001) Construction and analysis of ss-lactamase-inhibitory protein (BLIP) non-producer mutants of Streptomyces clavuligerus. Microbiol-SGM 147:325-335
    • (2001) Microbiol-SGM , vol.147 , pp. 325-335
    • Thai, W.1    Paradkar, A.S.2    Jensen, S.E.3
  • 36
    • 11044233253 scopus 로고    scopus 로고
    • Transcriptional and translational analysis of the ccaR gene from Streptomyces clavuligerus
    • 10.1099/mic.0.27245-0 1:CAS:528:DC%2BD2MXis1egtQ%3D%3D
    • Wang L, Tahlan K, Kaziuk TL, Alexander DC, Jensen SE (2004) Transcriptional and translational analysis of the ccaR gene from Streptomyces clavuligerus. Microbiol-SGM 150(12):4137-4145
    • (2004) Microbiol-SGM , vol.150 , Issue.12 , pp. 4137-4145
    • Wang, L.1    Tahlan, K.2    Kaziuk, T.L.3    Alexander, D.C.4    Jensen, S.E.5
  • 37
    • 0027289141 scopus 로고
    • The biosynthetic genes for clavulanic acid and cephamycin production occurs as a supercluster in three Streptomyces
    • 10.1111/j.1574-6968.1993.tb06326.x 1:CAS:528:DyaK3sXltFSgu74%3D
    • Ward JM, Hodgson JE (1993) The biosynthetic genes for clavulanic acid and cephamycin production occurs as a supercluster in three Streptomyces. FEMS Microbiol Lett 110:239-242
    • (1993) FEMS Microbiol Lett , vol.110 , pp. 239-242
    • Ward, J.M.1    Hodgson, J.E.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.