Improved volumetric measurement of brain structure with a distortion correction procedure using an ADNI phantom

Medical Physics

Volumn 40, Issue 6, 2013, Pages

  Maikusa, Norihide ^a   Yamashita, Fumio ^b   Tanaka, Kenichiro ^c   Abe, Osamu ^d   Kawaguchi, Atsushi ^e   Kabasawa, Hiroyuki ^f   Chiba, Shoma ^c   Kasahara, Akihiro ^g   Kobayashi, Nobuhisa ^h   Yuasa, Tetsuya ⁱ   Sato, Noriko ^a   Matsuda, Hiroshi ^a   Iwatsubo, Takeshi ^j  

^a NATIONAL INSTITUTE OF MENTAL HEALTH   (Japan)

^b IWATE MEDICAL UNIVERSITY   (Japan)

^c Research Association for Biotechnology   (Japan)

^d NIHON UNIVERSITY   (Japan)

^e KURUME UNIVERSITY   (Japan)

^f GE HEALTHCARE   (United Kingdom)

^g UNIVERSITY OF TOKYO HOSPITAL   (Japan)

^h Oizumi Hospital   (Japan)

ⁱ YAMAGATA UNIVERSITY   (Japan)

^j UNIVERSITY OF TOKYO   (Japan)

more..

Author keywords

Alzheimer's disease; geometric distortion; image normalization; magnetic resonance imaging

Indexed keywords

ELECTROMAGNETIC WAVE ATTENUATION; ERRORS; GEOMETRY; HARMONIC ANALYSIS; MEAN SQUARE ERROR; NEURODEGENERATIVE DISEASES; PHANTOMS; SCANNING;

ALZHEIMER'S DISEASE; COEFFICIENT OF VARIATION; GEOMETRIC DISTORTION; IMAGE NORMALIZATION; MORPHOMETRIC MEASUREMENTS; NEURODEGENERATIVE DISORDERS; ROOT MEAN SQUARE ERRORS; WILCOXON SIGNED RANK TEST;

MAGNETIC RESONANCE IMAGING;

AGED; ALZHEIMER DISEASE; ARTICLE; CONTROLLED STUDY; FEMALE; GRAY MATTER; HUMAN; MAJOR CLINICAL STUDY; MALE; NEUROIMAGING; NUCLEAR MAGNETIC RESONANCE IMAGING; NUCLEAR MAGNETIC RESONANCE SCANNER; PHANTOM; PRIORITY JOURNAL; REPRODUCIBILITY; VOLUMETRY; VOXEL BASED MORPHOMETRY; WILCOXON SIGNED RANKS TEST; ALGORITHM; ANATOMY AND HISTOLOGY; ARTIFACT; BRAIN; COMPUTER ASSISTED DIAGNOSIS; DEVICES; IMAGE ENHANCEMENT; IMAGE QUALITY; ORGAN SIZE; PROCEDURES; SENSITIVITY AND SPECIFICITY; THREE DIMENSIONAL IMAGING; EQUIPMENT; HISTOLOGY; METHODOLOGY;

ALGORITHMS; ARTIFACTS; BRAIN; HUMANS; IMAGE ENHANCEMENT; IMAGE INTERPRETATION, COMPUTER-ASSISTED; IMAGING, THREE-DIMENSIONAL; MAGNETIC RESONANCE IMAGING; ORGAN SIZE; PHANTOMS, IMAGING; REPRODUCIBILITY OF RESULTS; SENSITIVITY AND SPECIFICITY;

EID: 84878937483     PISSN: 00942405     EISSN: None     Source Type: Journal    
DOI: 10.1118/1.4801913     Document Type: Article

References (27)

1. C. Fennema-Notestine, D. J. Hagler, Jr., L. K. McEvoy, A. S. Fleisher, E. H. Wu, D. S. Karow, A. M. Dale, and Alzheimer's Disease Neuroimaging Initiative, " Structural MRI biomarkers for preclinical and mild Alzheimer's disease.," Hum. Brain. Mapp. 30 (10), 3238-3253 (2009). 10.1002/hbm.20744
2. B. C. Dickerson, I. Goncharova, M. P. Sullivan, C. Forchetti, R. S. Wilson, D. A. Bennett, L. A. Beckett, and L. deToledo-Morrell, " MRI-derived entorhinal and hippocampal atrophy in incipient and very mild Alzheimer's disease.," Neurobiol. Aging 22, 747-754 (2001). 10.1016/S0197-4580(01)00271-8
3. D. Holland, J. B. Brewer, D. J. Hagler, C. Fennema-Notestine, A. M. Dale, and Alzheimer's Disease Neuroimaging Initiative, " Subregional neuroanatomical change as a biomarker for Alzheimer's disease.," Proc. Natl. Acad. Sci. U.S.A. 106 (49), 20954-20959 (2009). 10.1073/pnas.0906053106
4. M. Grundman, D. Sencakova, C. R. Jack, Jr., R. C. Petersen, H. T. Kim, A. Schultz, M. F. Weiner, C. DeCarli, S. T. DeKosky, C. Dyck, R. G. Thomas, and L. J. Thal, " Alzheimer's disease cooperative study brain MRI hippocampal volume and prediction of clinical status in a mild cognitive impairment trial.," J. Mol. Neurosci. 19, 23-27 (2002). 10.1007/s12031-002-0006-6
5. C. R. Jack, Jr., R. C. Petersen, Y. C. Xu, S. C. Waring, P. C. O'Brien, E. G. Tangalos, G. E. Smith, R. J. Ivnik, and E. Kokmen, " Medial temporal atrophy on MRI in normal aging and very mild Alzheimer's disease.," Neurology. 49, 786-794 (1997). 10.1212/WNL.49.3.786
6. S. Klöppel, C. M. Stonnington, C. Chu, B. Draganski, R. I. Scahill, J. D. Rohrer, N. C. Fox, C. R. Jack, Jr., J. Ashburner, and R. S. J. Frackowiak, " Automatic classification of MR scans in Alzheimer's disease.," Brain 131, 681-689 (2008). 10.1093/brain/awm319
7. B. Magnin, L. Mesrob, S. Kinkingnéhun, M. Pélégrini- Issac, O. Colliot, M. Sarazin, B. Dubois, S. Lehéricy, and H. Benali, " Support vector machine-based classification of Alzheimer's disease from whole-brain anatomical MRI.," Neuroradiology 51, 73-83 (2009). 10.1007/s00234-008-0463-x
8. H. Matsuda, S. Mizumura, K. Nemoto, F. Yamashita, E. Imabayashi, N. Sato, and T. Asada, " Automatic voxel-based morphometry of structural MRI by SPM8 plus diffeomorphic anatomic registration through exponentiated Lie algebra improves the diagnosis of probable Alzheimer disease.," AJNR Am. J. Neuroradiol. 33, 1109-1114 (2012). 10.3174/ajnr.A2935
9. P. Vemuri, J. L. Gunter, M. L. Senjem, J. L. Whitwell, K. Kantarci, D. S. Knopman, B. F. Boeve, R. C. Petersen, and C. R. Jack, Jr., " Alzheimer's disease diagnosis in individual subjects using structural MR images: Validation studies.," Neuroimage 39, 1186-1197 (2008). 10.1016/j.neuroimage.2007.09. 073
10. B. Dubois, H. H. Feldman, C. Jacova, S. T. Dekosky, P. Barberger-Gateau, J. Cummings, A. Delacourte, D. Galasko, S. Gauthier, G. Jicha, K. Meguro, J. O'brien, F. Pasquier, P. Robert, M. Rossor, S. Salloway, Y. Stern, P. J. Visser, and P. Scheltens, " Research criteria for the diagnosis of Alzheimer's disease: Revising the NINCDS-ADRDA criteria.," Lancet Neurol. 6 (8), 734-746 (2007). 10.1016/S1474-4422(07)70178-3
11. R. Cuingnet, E. Gerardin, J. Tessieras, G. Auzias, S. Lehéricy, M. O. Habert, M. Chupin, H. Benali, and O. Colliot, " Automatic classification of patients with Alzheimer's disease from structural MRI: A comparison of ten methods using the ADNI database.," Neuroimage 56, 766-781 (2011). 10.1016/j.neuroimage.2010.06.013
12. S. K. Madsen, A. J. Ho, X. Hua, P. S. Saharan, A. W. Toga, C. R. Jack, Jr., M. W. Weiner, and P. M. Thompson, " 3D maps localize caudate nucleus atrophy in 400 Alzheimer's disease, mild cognitive impairment, and healthy elderly subjects.," Neurobiol. Aging 31, 1312-1325 (2010). 10.1016/j.neurobiolaging.2010.05.002
13. C. R. Jack, Jr., M. A. Bernstein, N. C. Fox, P. Thompson, G. Alexander, D. Harvey, B. Borowski, P. J. Britson, J. L. Whitwell, C. Ward, A. M. Dale, J. P. Felmlee, J. L. Gunter, D. L. Hill, R. Killiany, N. Schuff, S. Fox-Bosetti, C. Lin, C. Studholme, C. S. DeCarli, G. Krueger, H. A. Ward, G. J. Metzger, K. T. Scott, R. Mallozzi, D. Blezek, J. Levy, J. P. Debbins, A. S. Fleisher, M. Albert, R. Green, G. Bartzokis, G. Glover, J. Mugler, and M. W. Weiner, " The Alzheimer's Disease Neuroimaging Initiative (ADNI): MRI methods.," J. Magn. Reson. Imaging 27 (4), 685-691 (2008). 10.1002/jmri.21049
14. T. Iwatsubo, " Japanese Alzheimer's Disease Neuroimaging Initiative: Present status and future.," Alzheimers Dement. 6, 297-299 (2010). 10.1016/j.jalz.2010.03.011
15. A. Janke, H. Zhao, G. J. Gowin, G. J. Galloway, and D. M. Doddrell, " Use of spherical harmonic deconvolution methods to compensate for nonlinear gradient effects on MRI images.," Magnet. Reson. Med. 52, 115-122 (2004). 10.1002/mrm.20122
16. Z. Caramanos, V. S. Fonov, S. J. Francis, S. Narayanan, G. B. Pike, D. L. Collins, and D. L. Arnold, " Gradient distortions in MRI: Characterizing and correcting for their effects on SENA-generated measures of brain volume change.," Neuroimage 49, 1601-1611 (2010). 10.1016/j.neuroimage.2009.08.008
17. L. N. Baldwin, K. Wachowicz, and S. D. Thomas, " Characterization, prediction and correction of geometric distortion in 3 T MRI images.," Med. Phys. 34, 388-399 (2007). 10.1118/1.2402331
18. A. D. Leow, A. D. Klunder, C. R. Jack, Jr., A. W. Toga, A. M. Dale, M. A. Bernstein, P. J. Britson, J. L. Gunter, C. P. Ward, J. L. Whitwell, B. J. Borowski, A. S. Fleisher, N. C. Fox, D. Harvey, J. Kornak, N. Schuff, C. Studholme, G. E. Alexander, M. W. Weiner, P. M. Thompson, and ADNI Preparatory Phase Study, " Longitudinal stability of MRI for mapping brain change using tensor-based morphometry.," Neuroimage 31, 627-640 (2006). 10.1016/j.neuroimage.2005.12.013
19. J. L. Gunter, M. A. Bernstein, B. J. Borowski, C. P. Ward, P. J. Britson, and J. P. Felmlee, " Measurement of MRI scanner performance with the ADNI phantom.," Med. Phys. 36, 2193-2205 (2009). 10.1118/1.3116776
20. L. Schad, S. Lott, F. Schmitt, V. Sturm, and W. J. Lorenz, " Correction of spatial distortion in MRI image: A prerequisite for accurate stereotaxy.," J. Comput. Assist. Tomogr. 11, 499-505 (1987). 10.1097/00004728-198705000-00025
21. S. Langlois, M. Desvigness, J. M. Constans, and M. Revenu, " MRI geometric distortion: A simple approach to correcting the effects of non-linear gradient fields.," J. Comput. Assist. Tomogr. 9, 821-831 (1999).
22. C. Menuel, L. Garnero, E. Bardinet, F. Poupon, D. Phalippou, and D. Dormont, " Characterization and correction of distortions in stereotactic magnetic resonance imaging for bilateral subthalamic stimulation in Parkinson disease.," J. Neurosurg. 103, 256-266 (2005). 10.3171/jns.2005.103.2.0256
23. A. R. Liddle, " Information criteria for astrophysical model selection.," Mon. Not. Roy. Astron. Soc. Lett. 377, L74-L78 (2007). 10.1111/j.1745-3933.2007.00306.x
24. G. Schwarz, " Estimating the dimension of a model.," Ann. Stat. 6, 461-464 (1978). 10.1214/aos/1176344136
25. J. Jovicich, S. Czanner, D. Greve, E. Haley, A. van der Kouwe, R. Gollub, D. Kennedy, F. Schmitt, G. Brown, J. MacFall, B. Fischl, and A. Dale, " Reliability in multi-site structural MRI studies: Effects of gradient non-linearity correction on phantom and human data.," Neuroimage 30, 436-443 (2006). 10.1016/j.neuroimage.2005.09.046
26. C. J. C. Bakker, M. A. Moerland, R. Bhagwandien, and R. Beersma, " Analysis of machine-dependent and object-induced geometric distortion if 2DFT MR imaging.," Magn. Reson. Imaging 10, 597-608 (1992). 10.1016/0730-725X(92) 90011-N
27. M. J. Clarkson, S. Ourselin, C. Nielsen, K. K. Leung, J. Barnes, J. L. Whitwell, J. L. Gunter, D. L. Hill, M. W. Weiner, C. R. Jack, Jr., N. C. Fox, and Alzheimer's Disease Neuroimaging Initiative, " Comparison of phantom and registration scaling corrections using the ADNI cohort.," Neuroimage 47, 1506-1513 (2009). 10.1016/j.neuroimage.2009.05.045