메뉴 건너뛰기




Volumn 2, Issue 1, 2013, Pages 1-9

Purification and identification of trichloroethylene induced proteins from Stenotrophomonas maltophilia PM102 by immuno-affinity-chromatography and MALDI-TOF mass spectrometry

Author keywords

MALDI TOF MS; Preadsorbed antibody; Stenotrophomonas maltophilia PM102; Trichloroethylene (tce)

Indexed keywords


EID: 84878776857     PISSN: None     EISSN: 21931801     Source Type: Journal    
DOI: 10.1186/2193-1801-2-207     Document Type: Article
Times cited : (10)

References (27)
  • 1
    • 0024565907 scopus 로고
    • Degradation of trichloroethylene by ammonia oxidizing bacterium Nitrosomonas europaea
    • Arciero D, Vannelli T, Logan M, Hooper AB (1989) Degradation of trichloroethylene by ammonia oxidizing bacterium Nitrosomonas europaea. Biochem Biophys Res Commun 159:640-643
    • (1989) Biochem Biophys Res Commun , vol.159 , pp. 640-643
    • Arciero, D.1    Vannelli, T.2    Logan, M.3    Hooper, A.B.4
  • 2
    • 0032885374 scopus 로고    scopus 로고
    • Genotypic and phenotypic relationships between clinical and environmental isolates of Stenotrophomonas maltophilia
    • [PubMed] [Ref list]
    • Berg G, Roskot N, Smalla K (1999) Genotypic and phenotypic relationships between clinical and environmental isolates of Stenotrophomonas maltophilia. J Clin Microbiol 37(11):3594-3600[PubMed] [Ref list]
    • (1999) J Clin Microbiol , vol.37 , Issue.11 , pp. 3594-3600
    • Berg, G.1    Roskot, N.2    Smalla, K.3
  • 3
    • 0028908349 scopus 로고
    • Degradation of hexahydro-1,3,5-trinitro-1,3,5- triazine (RDX) by Stenotrophomonas maltophilia PB1
    • [PubMed] [Ref list]
    • Binks PR, Nicklin S, Bruce NC (1995) Degradation of hexahydro-1,3,5-trinitro-1,3,5- triazine (RDX) by Stenotrophomonas maltophilia PB1. Appl Environ Microbiol 61(4):1318-1322[PubMed] [Ref list]
    • (1995) Appl Environ Microbiol , vol.61 , Issue.4 , pp. 1318-1322
    • Binks, P.R.1    Nicklin, S.2    Bruce, N.C.3
  • 6
    • 0017184389 scopus 로고
    • A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding
    • [PubMed]
    • Bradford MM (1976) A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72:248-254[PubMed]
    • (1976) Anal Biochem , vol.72 , pp. 248-254
    • Bradford, M.M.1
  • 7
    • 0030900929 scopus 로고    scopus 로고
    • Renal cell carcinomas in trichloroethene (TRI) exposed persons are associated with somatic mutations in the von Hippel-Lindau (VHL) tumour suppressor gene
    • Brüning T, Weirich G, Hornauer MA, Höfler H, Brauch H (1997) Renal cell carcinomas in trichloroethene (TRI) exposed persons are associated with somatic mutations in the von Hippel-Lindau (VHL) tumour suppressor gene. Arch Toxicol 71(5):332-335
    • (1997) Arch Toxicol , vol.71 , Issue.5 , pp. 332-335
    • Brüning, T.1    Weirich, G.2    Hornauer, M.A.3    Höfler, H.4    Brauch, H.5
  • 8
    • 39449105071 scopus 로고    scopus 로고
    • Cell-PLoc: A package of Web servers for predicting subcellular localization of proteins in various organisms (updated version: Cell-PLoc 2.0: An improved package of web-servers for predicting subcellular localization of proteins in various organisms, Natural Science, 2010, 2, 1090-1103)
    • doi:10.1038/nprot.2007.494. PMID 18274516
    • Chou KC, Shen HB (2008) Cell-PLoc: a package of Web servers for predicting subcellular localization of proteins in various organisms (updated version: Cell-PLoc 2.0: An improved package of web-servers for predicting subcellular localization of proteins in various organisms, Natural Science, 2010, 2, 1090-1103). Nat Protoc 3(2):153-162,doi:10.1038/nprot.2007.494. PMID 18274516
    • (2008) Nat Protoc , vol.3 , Issue.2 , pp. 153-162
    • Chou, K.C.1    Shen, H.B.2
  • 9
    • 33646397599 scopus 로고    scopus 로고
    • Evolution of mutation rates in bacteria
    • doi: 10.1111/j.1365-2958.2006.05150.x. PMID 16677295
    • Denamur E, Matic I (2006) Evolution of mutation rates in bacteria. Mol Microbiol 60(4): 820-827,doi: 10.1111/j.1365-2958.2006.05150.x. PMID 16677295
    • (2006) Mol Microbiol , vol.60 , Issue.4 , pp. 820-827
    • Denamur, E.1    Matic, I.2
  • 10
    • 0023598388 scopus 로고
    • Trichloroethylene: Water contamination and health risk assessment
    • Fan AM (1988) Trichloroethylene: water contamination and health risk assessment. Rev Environ Contam Toxicol 101:55-92
    • (1988) Rev Environ Contam Toxicol , vol.101 , pp. 55-92
    • Fan, A.M.1
  • 11
    • 0028853943 scopus 로고    scopus 로고
    • Protein Identification and Analysis Tools on the ExPASy Server
    • Walker JM (ed) The Proteomics Protocols Handbook. Humana, Totowa, NJ Gist GL, Burg JR (1995) Trichloroethylene - a review of the literature from a health effects perspective, doi:10.1177/ 074823379501100301
    • Gasteiger E, Hoogland C, Gattiker A, Duvaud S, Wilkins MR, Appel RD, Bairoch A (2005) Protein Identification and Analysis Tools on the ExPASy Server. In: Walker JM (ed) The Proteomics Protocols Handbook. Humana, Totowa, NJ Gist GL, Burg JR (1995) Trichloroethylene - a review of the literature from a health effects perspective. Toxicol Ind Health 11(3):253-307.doi:10.1177/ 074823379501100301
    • (2005) Toxicol Ind Health , vol.11 , Issue.3 , pp. 253-307
    • Gasteiger, E.1    Hoogland, C.2    Gattiker, A.3    Duvaud, S.4    Wilkins, M.R.5    Appel, R.D.6    Bairoch, A.7
  • 13
    • 0032733247 scopus 로고    scopus 로고
    • Genomic diversity of the genus Stenotrophomonas
    • [PubMed] [Ref list]
    • Hauben L, Vauterin L, Moore ER, Hoste B, Swings J (1999) Genomic diversity of the genus Stenotrophomonas. Int J Syst Bacteriol 49(Pt 4):1749-1760[PubMed] [Ref list]
    • (1999) Int J Syst Bacteriol , vol.49 , Issue.Pt 4 , pp. 1749-1760
    • Hauben, L.1    Vauterin, L.2    Moore, E.R.3    Hoste, B.4    Swings, J.5
  • 14
    • 84872179614 scopus 로고    scopus 로고
    • An efficient in-gel digestion protocol for mass spectral analysis by MALDI-TOF-MS and MS/MS and its use for proteomic analysis of vigna mungo leaves
    • doi:10.1007/ s11105-012-0475-x
    • Kundu S, Chakraborty D, Das K, Pal A (2012) An efficient in-gel digestion protocol for mass spectral analysis by MALDI-TOF-MS and MS/MS and its use for proteomic analysis of vigna mungo leaves. Plant Mol Biol Rep.doi:10.1007/ s11105-012-0475-x
    • (2012) Plant Mol Biol Rep
    • Kundu, S.1    Chakraborty, D.2    Das, K.3    Pal, A.4
  • 15
    • 0343381943 scopus 로고
    • The Fujiwara reaction: Some observation on the mechanism
    • Moss MS, Rylance HJ (1966) The Fujiwara reaction: some observation on the mechanism. Nature 210:945-946
    • (1966) Nature , vol.210 , pp. 945-946
    • Moss, M.S.1    Rylance, H.J.2
  • 16
    • 84973574472 scopus 로고    scopus 로고
    • Mukherjee P, Roy P (2012) Identification and characterisation of a bacterial isolate capable of growth on trichloroethylene as the sole carbon source
    • doi:10.4236/aim.2012.23034
    • Mukherjee P, Roy P (2012) Identification and characterisation of a bacterial isolate capable of growth on trichloroethylene as the sole carbon source. Advances in Microbiology 2(3):184-194.doi:10.4236/aim.2012.23034
    • Advances In Microbiology , vol.2 , Issue.3 , pp. 184-194
  • 17
    • 84878796841 scopus 로고    scopus 로고
    • Cloning, sequencing and expression of novel trichloroethylene degradation genes from Stenotrophomonas maltophilia PM102: A case of gene duplication
    • doi:10.4172/ 2155-6199.1000177
    • Mukherjee P, Roy P (2013) Cloning, sequencing and expression of novel trichloroethylene degradation genes from Stenotrophomonas maltophilia PM102: a case of gene duplication. J Bioremed Biodeg 4:177.doi:10.4172/ 2155-6199.1000177
    • (2013) J Bioremed Biodeg , vol.4 , pp. 177
    • Mukherjee, P.1    Roy, P.2
  • 18
    • 0027506297 scopus 로고
    • Degradation of acrylamide by immobilized cells of a Pseudomonas sp. and Xanthomonas maltophilia
    • [PubMed] [Ref list]
    • Nawaz MS, Franklin W, Cerniglia CE (1993) Degradation of acrylamide by immobilized cells of a Pseudomonas sp. and Xanthomonas maltophilia. Can J Microbiol 39(2):207-212[PubMed] [Ref list]
    • (1993) Can J Microbiol , vol.39 , Issue.2 , pp. 207-212
    • Nawaz, M.S.1    Franklin, W.2    Cerniglia, C.E.3
  • 19
    • 12944269065 scopus 로고
    • Rapid identification of proteins by peptidemass fingerprinting
    • doi:10.1016/0960-9822(93)90195-T
    • Pappin DJ, Hojrup P, Bleasby AJ (1993) Rapid identification of proteins by peptidemass fingerprinting. Curr Biol 3(6):327-332. doi:10.1016/0960-9822(93)90195-T
    • (1993) Curr Biol , vol.3 , Issue.6 , pp. 327-332
    • Pappin, D.J.1    Hojrup, P.2    Bleasby, A.J.3
  • 20
    • 0033434080 scopus 로고    scopus 로고
    • Probability-based protein Identification by searching sequence databases using mass spectrometry data
    • Perkins DN, Pappin DJC, Creasy DM, Cottrell JS (1999) Probability-based protein Identification by searching sequence databases using mass spectrometry data. Electrophoresis 20:3551-3567
    • (1999) Electrophoresis , vol.20 , pp. 3551-3567
    • Perkins, D.N.1    Pappin, D.J.C.2    Creasy, D.M.3    Cottrell, J.S.4
  • 21
    • 0032751752 scopus 로고    scopus 로고
    • Soluble methane monooxygenase gene clusters from trichloroethylenedegrading Methylomonas sp. strains and detection of methanotrophs during in situ bioremediation
    • Shigematsu T, Hanada S, Eguchi M, Kamagata Y, Kanagawa T, Kurane R (1999) Soluble methane monooxygenase gene clusters from trichloroethylenedegrading Methylomonas sp. strains and detection of methanotrophs during in situ bioremediation. Appl Environ Microbiol 65:5198-5206
    • (1999) Appl Environ Microbiol , vol.65 , pp. 5198-5206
    • Shigematsu, T.1    Hanada, S.2    Eguchi, M.3    Kamagata, Y.4    Kanagawa, T.5    Kurane, R.6
  • 22
    • 84878788432 scopus 로고    scopus 로고
    • Immunoaffinity chomatography
    • Paper
    • Subramanian A (2000) Immunoaffinity chomatography., Papers in Biotechnology. Paper 22. http://digitalcommons.unl.edu/chemeng_biotechnology/22
    • (2000) Papers In Biotechnology , pp. 22
    • Subramanian, A.1
  • 24
    • 1242336857 scopus 로고    scopus 로고
    • High genetic diversity among Stenotrophomonas maltophilia strains despite their originating at a single hospital
    • Valdezate S, Vindel A, Martín-Dávila P, Del Saz BS, Baquero F, Cantón R (2004) High genetic diversity among Stenotrophomonas maltophilia strains despite their originating at a single hospital. J Clin Microbiol 42(2):693-699
    • (2004) J Clin Microbiol , vol.42 , Issue.2 , pp. 693-699
    • Valdezate, S.1    Vindel, A.2    Martín-Dávila, P.3    Del Saz, B.S.4    Baquero, F.5    Cantón, R.6
  • 25
    • 0024463372 scopus 로고
    • Survey of microbial oxygenases: Trichloroethylene degradation by propane-oxidxing bacteria
    • Wackett LP, Brusseau GA, Householder SR, Hanson RS (1989) Survey of microbial oxygenases: trichloroethylene degradation by propane-oxidxing bacteria. Appl Environ Microbiol 55:2960-2964
    • (1989) Appl Environ Microbiol , vol.55 , pp. 2960-2964
    • Wackett, L.P.1    Brusseau, G.A.2    Householder, S.R.3    Hanson, R.S.4
  • 26
    • 0030937402 scopus 로고    scopus 로고
    • A three-component enzyme system catalyzes the O Demethylation of the herbicide dicamba in Pseudomonas maltophilia DI-6
    • [PubMed] [Ref list]
    • Wang X, Li B, Herman PL, Weeks DP (1997) A three-component enzyme system catalyzes the O Demethylation of the herbicide dicamba in Pseudomonas maltophilia DI-6. Appl Environ Microbiol 63(4):1623-1626
    • (1997) Appl Environ Microbiol , vol.63 , Issue.4 , pp. 1623-1626
    • Wang, X.1    Li, B.2    Herman, P.L.3    Weeks, D.P.4
  • 27
    • 2442479591 scopus 로고    scopus 로고
    • Stress-directed adaptive mutations and evolution
    • doi:10.1111/j.1365-2958.2004.04012.x
    • Wright B (2004) Stress-directed adaptive mutations and evolution. Mol Microbiol 52(3):643-650. doi:10.1111/j.1365-2958.2004.04012.x
    • (2004) Mol Microbiol , vol.52 , Issue.3 , pp. 643-650
    • Wright, B.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.