메뉴 건너뛰기




Volumn 53, Issue 4, 2013, Pages 1529-1536

Population structure and single nucleotide polymorphism diversity of historical Minnesota maize inbreds

Author keywords

[No Author keywords available]

Indexed keywords

ZEA MAYS;

EID: 84878749938     PISSN: 0011183X     EISSN: 14350653     Source Type: Journal    
DOI: 10.2135/cropsci2012.11.0632     Document Type: Article
Times cited : (13)

References (36)
  • 1
    • 0002875962 scopus 로고
    • Some of the open pollinated varieties that contributed the most to modern hybrid corn
    • In:, Champaign, IL. 6-8 Mar. University of Illinois at Urbana-Champaign, Urbana, IL 1984
    • Baker, R. 1984. Some of the open pollinated varieties that contributed the most to modern hybrid corn. In: Proceedings of the 20th Annual Illinois Corn Breeders School, Champaign, IL. 6-8 Mar. 1984. University of Illinois at Urbana-Champaign, Urbana, IL. p. 1-19.
    • (1984) Proceedings of the 20th Annual Illinois Corn Breeders School , pp. 1-19
    • Baker, R.1
  • 2
    • 0019302053 scopus 로고
    • Construction of a genetic linkage map in man using restriction fragment length polymorphisms
    • Botstein, D., R.L. White, M. Skolnick, and R.W. Davis. 1980. Construction of a genetic linkage map in man using restriction fragment length polymorphisms. Am. J. Hum. Genet. 32:314-331.
    • (1980) Am. J. Hum. Genet , vol.32 , pp. 314-331
    • Botstein, D.1    White, R.L.2    Skolnick, M.3    Davis, R.W.4
  • 3
    • 35748946021 scopus 로고    scopus 로고
    • TASSEL: Software for association mapping of complex traits in diverse samples
    • doi:10.1093/bioinformatics/btm308
    • Bradbury, P.J., Z. Zhang, D.E. Kroon, T.M. Casstevens, Y. Ramdoss, and E.S. Buckler. 2007. TASSEL: Software for association mapping of complex traits in diverse samples. Bioinformatics 23:2633-2635. doi:10.1093/bioinformatics/btm308
    • (2007) Bioinformatics , vol.23 , pp. 2633-2635
    • Bradbury, P.J.1    Zhang, Z.2    Kroon, D.E.3    Casstevens, T.M.4    Ramdoss, Y.5    Buckler, E.S.6
  • 4
    • 21244479740 scopus 로고    scopus 로고
    • Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study
    • doi:10.1111/j.1365-294X.2005.02553.x
    • Evanno, G., S. Regnaut, and J. Goudet. 2005. Detecting the number of clusters of individuals using the software STRUCTURE: A simulation study. Mol. Ecol. 14:2611-2620. doi:10.1111/j.1365-294X.2005.02553.x
    • (2005) Mol. Ecol , vol.14 , pp. 2611-2620
    • Evanno, G.1    Regnaut, S.2    Goudet, J.3
  • 5
    • 77953032930 scopus 로고    scopus 로고
    • Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows
    • doi:10.1111/j.1755-0998.2010.02847.x
    • Excoffier, L., and H.E.L. Lischer. 2010. Arlequin suite ver 3.5: A new series of programs to perform population genetics analyses under Linux and Windows. Mol. Ecol. Resour. 10:564-567. doi:10.1111/j.1755-0998.2010.02847.x
    • (2010) Mol. Ecol. Resour , vol.10 , pp. 564-567
    • Excoffier, L.1    Lischer, H.E.L.2
  • 6
    • 84871920095 scopus 로고    scopus 로고
    • Genetic diversity analysis of elite European maize (Zea mays L.) inbred lines using AFLP, SSR, and SNP markers reveals ascertainment bias for a subset of SNPs
    • doi:10.1007/s00122-012-1968-6
    • Frascaroli, E., T. Schrag, and A. Melchinger. 2013. Genetic diversity analysis of elite European maize (Zea mays L.) inbred lines using AFLP, SSR, and SNP markers reveals ascertainment bias for a subset of SNPs. Theor. Appl. Genet. 126:133-141. doi:10.1007/s00122-012-1968-6
    • (2013) Theor. Appl. Genet , vol.126 , pp. 133-141
    • Frascaroli, E.1    Schrag, T.2    Melchinger, A.3
  • 8
    • 45849096332 scopus 로고    scopus 로고
    • Broadening the U. S maize germplasm base
    • Goodman, M. 2005. Broadening the U.S. maize germplasm base. Maydica 50:203-214.
    • (2005) Maydica , vol.50 , pp. 203-214
    • Goodman, M.1
  • 9
    • 0343020864 scopus 로고
    • Integrating exotic germplasm into Corn Belt maize breeding programs
    • doi:10.2135/cropsci1972.0011183X001200020016x
    • Hallauer, A.R., and J.H. Sears. 1972. Integrating exotic germplasm into Corn Belt maize breeding programs. Crop Sci. 12:203-206. doi:10.2135/cropsci1972.0011183X001200020016x
    • (1972) Crop Sci , vol.12 , pp. 203-206
    • Hallauer, A.R.1    Sears, J.H.2
  • 10
    • 78650044769 scopus 로고    scopus 로고
    • Genetic diversity of a maize association population with restricted phenology
    • doi:10.2135/cropsci2010.03.0178
    • Hansey, C.N., J.M. Johnson, R.S. Sekhon, S.M. Kaeppler, and N. De Leon. 2011. Genetic diversity of a maize association population with restricted phenology. Crop Sci. 51:704-715. doi:10.2135/cropsci2010.03.0178
    • (2011) Crop Sci , vol.51 , pp. 704-715
    • Hansey, C.N.1    Johnson, J.M.2    Sekhon, R.S.3    Kaeppler, S.M.4    De Leon, N.5
  • 11
    • 34547861256 scopus 로고    scopus 로고
    • CLUMPP: A cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure
    • doi:10.1093/bioinformatics/btm233
    • Jakobsson, M., and N.A. Rosenberg. 2007. CLUMPP: A cluster matching and permutation program for dealing with label switching and multimodality in analysis of population structure. Bioinformatics 23:1801-1806. doi:10.1093/bioinformatics/btm233
    • (2007) Bioinformatics , vol.23 , pp. 1801-1806
    • Jakobsson, M.1    Rosenberg, N.A.2
  • 12
    • 34548162746 scopus 로고    scopus 로고
    • In: Agronomy and Plant Genetics at the University of Minnesota. Minn. Ag. Exp. Stn. Rep. 247-2000. Minnesota Agricultural Experiment Station, Saint Paul, MN
    • Johnson, I.J., D.R. Hicks, J.C. Sentz. and R.H. Peterson. 2000. Corn improvement. In: Agronomy and Plant Genetics at the University of Minnesota. Minn. Ag. Exp. Stn. Rep. 247-2000. Minnesota Agricultural Experiment Station, Saint Paul, MN. p. 63-78.
    • (2000) Corn improvement , pp. 63-78
    • Johnson, I.J.1    Hicks, D.R.2    Sentz, J.C.3    Peterson, R.H.4
  • 13
    • 0034823292 scopus 로고    scopus 로고
    • Molecular marker diversity among current and historical maize inbreds
    • doi:10.1007/PL00002917
    • Lu, H., and R. Bernardo. 2001. Molecular marker diversity among current and historical maize inbreds. Theor. Appl. Genet. 103:613-617. doi:10.1007/PL00002917
    • (2001) Theor. Appl. Genet , vol.103 , pp. 613-617
    • Lu, H.1    Bernardo, R.2
  • 14
    • 84878767106 scopus 로고    scopus 로고
    • MBS Genetics., 36th ed. MBS Genetics, Story City, IA
    • MBS Genetics. 2009. Genetics handbook. 36th ed. MBS Genetics, Story City, IA.
    • (2009) Genetics handbook
  • 15
    • 33845683495 scopus 로고    scopus 로고
    • Availability and analysis of proprietary dent corn inbred lines with expired U.S. Plant Variety Protection
    • doi:10.2135/cropsci2006.05.0358
    • Mikel, M.A. 2006. Availability and analysis of proprietary dent corn inbred lines with expired U.S. Plant Variety Protection. Crop Sci. 46:2555-2560. doi:10.2135/cropsci2006.05.0358
    • (2006) Crop Sci , vol.46 , pp. 2555-2560
    • Mikel, M.A.1
  • 16
    • 79952483763 scopus 로고    scopus 로고
    • Genetic composition of contemporary U. S commercial dent corn germplasm
    • doi:10.2135/cropsci2010.06.0332
    • Mikel, M.A. 2011. Genetic composition of contemporary U.S. commercial dent corn germplasm. Crop Sci. 51:592-599. doi:10.2135/cropsci2010.06.0332
    • (2011) Crop Sci , vol.51 , pp. 592-599
    • Mikel, M.A.1
  • 17
    • 33646448550 scopus 로고    scopus 로고
    • Evolution of North American dent corn from public to proprietary germplasm
    • doi:10.2135/cropsci2005.10-0371
    • Mikel, M.A., and J.W. Dudley. 2006. Evolution of North American dent corn from public to proprietary germplasm. Crop Sci. 46:1193-1205. doi:10.2135/cropsci2005.10-0371
    • (2006) Crop Sci , vol.46 , pp. 1193-1205
    • Mikel, M.A.1    Dudley, J.W.2
  • 18
    • 54949106977 scopus 로고    scopus 로고
    • Molecular characterization of maize inbreds with expired U.S. Plant Variety Protection
    • doi:10.2135/cropsci2008.02.0092
    • Nelson, P.T., N.D. Coles, J.B. Holland, D.M. Bubeck, S. Smith, and M.M. Goodman. 2008. Molecular characterization of maize inbreds with expired U.S. Plant Variety Protection. Crop Sci. 48:1673-1685. doi:10.2135/cropsci2008.02.0092
    • (2008) Crop Sci , vol.48 , pp. 1673-1685
    • Nelson, P.T.1    Coles, N.D.2    Holland, J.B.3    Bubeck, D.M.4    Smith, S.5    Goodman, M.M.6
  • 19
    • 36148955826 scopus 로고    scopus 로고
    • The history and success of the public-private project on Germplasm Enhancement of Maize (GEM)
    • doi:10.1016/S0065-2113(02)78002-4
    • Pollak, L.M. 2003. The history and success of the public-private project on Germplasm Enhancement of Maize (GEM). Adv. Agron. 78:45-87. doi:10.1016/S0065-2113(02)78002-4
    • (2003) Adv. Agron , vol.78 , pp. 45-87
    • Pollak, L.M.1
  • 20
    • 0034118493 scopus 로고    scopus 로고
    • Inference of population structure using multilocus genotype data
    • Pritchard, J.K., M. Stephens, and P. Donnelly. 2000. Inference of population structure using multilocus genotype data. Genetics 155:945-959.
    • (2000) Genetics , vol.155 , pp. 945-959
    • Pritchard, J.K.1    Stephens, M.2    Donnelly, P.3
  • 21
    • 0242596256 scopus 로고    scopus 로고
    • (accessed 10 Nov. 2012). Department of Human Genetics, University of Chicago, Chicago, IL
    • Pritchard, J.K., X. Wen, and D. Falush. 2010. Documentation for STRUCTURE software: Version 2.3. Department of Human Genetics, University of Chicago, Chicago, IL. http://pritch.bsd. uchicago.edu/structure.html (accessed 10 Nov. 2012).
    • (2010) Documentation for STRUCTURE software: Version 2.3
    • Pritchard, J.K.1    Wen, X.2    Falush, D.3
  • 23
    • 84863304598 scopus 로고    scopus 로고
    • R Development Core Team., R Foundation for Statistical Computing, Vienna, Austria
    • R Development Core Team. 2012. R: A language and environment for statistical computing. R Foundation for Statistical Computing, Vienna, Austria.
    • (2012) R: A language and environment for statistical computing
  • 25
    • 33746466609 scopus 로고    scopus 로고
    • Latin American Maize Project (LAMP) and Germplasm Enhancement of Maize (GEM) project: Generating useful breeding germplasm
    • Salhuana, W., and L.M. Pollak. 2006. Latin American Maize Project (LAMP) and Germplasm Enhancement of Maize (GEM) project: Generating useful breeding germplasm. Maydica 51:339-355.
    • (2006) Maydica , vol.51 , pp. 339-355
    • Salhuana, W.1    Pollak, L.M.2
  • 26
    • 84863826623 scopus 로고    scopus 로고
    • NDSU EarlyGEM: Incorporating tropical and temperate elite exotic germplasm to increase the genetic diversity of short-season maize
    • Sharma, S., and M.J. Carena. 2012. NDSU EarlyGEM: Incorporating tropical and temperate elite exotic germplasm to increase the genetic diversity of short-season maize. Maydica 57:34-42.
    • (2012) Maydica , vol.57 , pp. 34-42
    • Sharma, S.1    Carena, M.J.2
  • 27
    • 8444240860 scopus 로고    scopus 로고
    • Changes in pedigree backgrounds of Pioneer brand maize hybrids widely grown from 1930 to 1999
    • doi:10.2135/cropsci2004.1935
    • Smith, J.S.C., D.N. Duvick, O.S. Smith, M. Cooper, and L. Feng. 2004. Changes in pedigree backgrounds of Pioneer brand maize hybrids widely grown from 1930 to 1999. Crop Sci. 44:1935-1946. doi:10.2135/cropsci2004.1935
    • (2004) Crop Sci , vol.44 , pp. 1935-1946
    • Smith, J.S.C.1    Duvick, D.N.2    Smith, O.S.3    Cooper, M.4    Feng, L.5
  • 29
    • 0033012987 scopus 로고    scopus 로고
    • Background of U. S hybrid corn
    • doi:10.2135/cropsci1999.0011183X003900020001x
    • Troyer, A.F. 1999. Background of U.S. hybrid corn. Crop Sci. 39:601-626. doi:10.2135/cropsci1999.0011183X003900020001x
    • (1999) Crop Sci , vol.39 , pp. 601-626
    • Troyer, A.F.1
  • 30
    • 1542290358 scopus 로고    scopus 로고
    • Background of U. S hybrid corn: Breeding, climate, and food
    • Troyer, A.F. 2004. Background of U.S. hybrid corn: Breeding, climate, and food. Crop Sci. 44:370-380.
    • (2004) Crop Sci , vol.44 , pp. 370-380
    • Troyer, A.F.1
  • 31
    • 34548162622 scopus 로고    scopus 로고
    • Background and importance of "Minnesota 13" corn
    • doi:10.2135/cropsci2006.10.0651
    • Troyer, A.F., and L.G. Hendrickson. 2007. Background and importance of "Minnesota 13" corn. Crop Sci. 47:905-914. doi:10.2135/cropsci2006.10.0651
    • (2007) Crop Sci , vol.47 , pp. 905-914
    • Troyer, A.F.1    Hendrickson, L.G.2
  • 32
    • 77953954727 scopus 로고    scopus 로고
    • Minnesota corn breeding history: Department of Agronomy & Plant Genetics Centennial
    • doi:10.2135/cropsci2010.02.0072
    • Troyer, A.F., and M.A. Mikel. 2010. Minnesota corn breeding history: Department of Agronomy & Plant Genetics Centennial. Crop Sci. 50:1141-1150. doi:10.2135/cropsci2010.02.0072
    • (2010) Crop Sci , vol.50 , pp. 1141-1150
    • Troyer, A.F.1    Mikel, M.A.2
  • 33
    • 84864526930 scopus 로고    scopus 로고
    • Historical genomics of North American maize
    • doi:10.1073/pnas.1209275109
    • van Heerwaarden, J., M.B. Hufford, and J. Ross-Ibarra. 2012. Historical genomics of North American maize. Proc. Natl. Acad. Sci. USA 109:12420-12425. doi:10.1073/pnas.1209275109
    • (2012) Proc. Natl. Acad. Sci. USA , vol.109 , pp. 12420-12425
    • van Heerwaarden, J.1    Hufford, M.B.2    Ross-Ibarra, J.3
  • 35
    • 79952509464 scopus 로고    scopus 로고
    • Association mapping for enhancing maize (Zea mays L.) genetic improvement
    • doi:10.2135/cropsci2010.04.0233
    • Yan, J., M. Warburton, and J. Crouch. 2011. Association mapping for enhancing maize (Zea mays L.) genetic improvement. Crop Sci. 51:433-449. doi:10.2135/cropsci2010.04.0233
    • (2011) Crop Sci , vol.51 , pp. 433-449
    • Yan, J.1    Warburton, M.2    Crouch, J.3
  • 36
    • 85164502327 scopus 로고    scopus 로고
    • Status and prospects of association mapping in plants
    • doi:10.3835/plantgenome2008.02.0089
    • Zhu, C., M. Gore, E.S. Buckler, and J. Yu. 2008. Status and prospects of association mapping in plants. Plant Gen. 1:5-20. doi:10.3835/plantgenome2008.02.0089
    • (2008) Plant Gen , vol.1 , pp. 5-20
    • Zhu, C.1    Gore, M.2    Buckler, E.S.3    Yu, J.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.