Chromosomal Organization and Segregation in Pseudomonas aeruginosa

PLoS Genetics

Volumn 9, Issue 5, 2013, Pages

  Vallet Gely, Isabelle ^a,b   Boccard, Frédéric ^a,b  

^a CENTRE DE GÉNÉTIQUE MOLÉCULAIRE   (France)

^b UNIVERSITÉ PARIS SACLAY   (France)

Author keywords

[No Author keywords available]

Indexed keywords

ARTICLE; BACTERIAL CELL; CELL DIVISION; CHROMOSOMAL LOCALIZATION; CHROMOSOME MARKER; CHROMOSOME REPLICATION; CHROMOSOME SEGREGATION; CHROMOSOME STRUCTURE; GAMMAPROTEOBACTERIA; GENE LOCUS; GENETIC VARIABILITY; NONHUMAN; PSEUDOMONAS AERUGINOSA; REPLISOME;

CHROMOSOME MAPPING; CHROMOSOME SEGREGATION; CHROMOSOME STRUCTURES; CHROMOSOMES, BACTERIAL; DNA REPLICATION; DNA, CIRCULAR; ESCHERICHIA COLI; ORIGIN RECOGNITION COMPLEX; PSEUDOMONAS AERUGINOSA;

GAMMAPROTEOBACTERIA; PSEUDOMONAS AERUGINOSA;

EID: 84878516389     PISSN: 15537390     EISSN: 15537404     Source Type: Journal    
DOI: 10.1371/journal.pgen.1003492     Document Type: Article

References (44)

1. Silby MW, Winstanley C, Godfrey SA, Levy SB, Jackson RW, (2011) Pseudomonas genomes: diverse and adaptable. FEMS Microbiol Rev 35: 652-680.
2. Govan JR, Deretic V, (1996) Microbial pathogenesis in cystic fibrosis: mucoid Pseudomonas aeruginosa and Burkholderia cepacia. Microbiol Rev 60: 539-574.
3. Lister PD, Wolter DJ, Hanson ND, (2009) Antibacterial-resistant Pseudomonas aeruginosa: clinical impact and complex regulation of chromosomally encoded resistance mechanisms. Clin Microbiol Rev 22: 582-610.
4. Stover CK, Pham XQ, Erwin AL, Mizoguchi SD, Warrener P, et al. (2000) Complete genome sequence of Pseudomonas aeruginosa PAO1, an opportunistic pathogen. Nature 406: 959-964.
5. Yee TW, Smith DW, (1990) Pseudomonas chromosomal replication origins: a bacterial class distinct from Escherichia coli-type origins. Proc Natl Acad Sci U S A 87: 1278-1282.
6. Jiang Y, Yao S, Helinski D, Toukdarian A, (2006) Functional analysis of two putative chromosomal replication origins from Pseudomonas aeruginosa. Plasmid 55: 194-200.
7. de Vries R, (2010) DNA condensation in bacteria: Interplay between macromolecular crowding and nucleoid proteins. Biochimie 92: 1715-1721.
8. Thanbichler M, Shapiro L, (2006) Chromosome organization and segregation in bacteria. J Struct Biol 156: 292-303.
9. Toro E, Shapiro L, (2010) Bacterial chromosome organization and segregation. Cold Spring Harb Perspect Biol 2: a000349.
10. Possoz C, Junier I, Espeli O, (2012) Bacterial chromosome segregation. Front Biosci 17: 1020-1034.
11. Niki H, Yamaichi Y, Hiraga S, (2000) Dynamic organization of chromosomal DNA in Escherichia coli. Genes Dev 14: 212-223.
12. Valens M, Penaud S, Rossignol M, Cornet F, Boccard F, (2004) Macrodomain organization of the Escherichia coli chromosome. EMBO J 23: 4330-4341.
13. Lemon KP, Grossman AD, (2001) The extrusion-capture model for chromosome partitioning in bacteria. Genes Dev 15: 2031-2041.
14. Bates D, Kleckner N, (2005) Chromosome and replisome dynamics in E. coli: loss of sister cohesion triggers global chromosome movement and mediates chromosome segregation. Cell 121: 899-911.
15. Reyes-Lamothe R, Possoz C, Danilova O, Sherratt DJ, (2008) Independent positioning and action of Escherichia coli replisomes in live cells. Cell 133: 90-102.
16. Jun S, Wright A, (2010) Entropy as the driver of chromosome segregation. Nat Rev Microbiol 8: 600-607.
17. Fogel MA, Waldor MK, (2006) A dynamic, mitotic-like mechanism for bacterial chromosome segregation. Genes Dev 20: 3269-3282.
18. Toro E, Hong SH, McAdams HH, Shapiro L, (2008) Caulobacter requires a dedicated mechanism to initiate chromosome segregation. Proc Natl Acad Sci U S A 105: 15435-15440.
19. Lee PS, Lin DC, Moriya S, Grossman AD, (2003) Effects of the chromosome partitioning protein Spo0J (ParB) on oriC positioning and replication initiation in Bacillus subtilis. J Bacteriol 185: 1326-1337.
20. Minnen A, Attaiech L, Thon M, Gruber S, Veening JW, (2011) SMC is recruited to oriC by ParB and promotes chromosome segregation in Streptococcus pneumoniae. Mol Microbiol 81: 676-688.
21. Sullivan NL, Marquis KA, Rudner DZ, (2009) Recruitment of SMC by ParB-parS organizes the origin region and promotes efficient chromosome segregation. Cell 137: 697-707.
22. Gruber S, Errington J, (2009) Recruitment of condensin to replication origin regions by ParB/SpoOJ promotes chromosome segregation in B. subtilis. Cell 137: 685-696.
23. Petrushenko ZM, She W, Rybenkov VV, (2011) A new family of bacterial condensins. Mol Microbiol 81: 881-896.
24. Lasocki K, Bartosik AA, Mierzejewska J, Thomas CM, Jagura-Burdzy G, (2007) Deletion of the parA (soj) homologue in Pseudomonas aeruginosa causes ParB instability and affects growth rate, chromosome segregation, and motility. J Bacteriol 189: 5762-5772.
25. Bartosik AA, Mierzejewska J, Thomas CM, Jagura-Burdzy G, (2009) ParB deficiency in Pseudomonas aeruginosa destabilizes the partner protein ParA and affects a variety of physiological parameters. Microbiology 155: 1080-1092.
26. Lau IF, Filipe SR, Soballe B, Okstad OA, Barre FX, et al. (2003) Spatial and temporal organization of replicating Escherichia coli chromosomes. Mol Microbiol 49: 731-743.
27. Nielsen HJ, Ottesen JR, Youngren B, Austin SJ, Hansen FG, (2006) The Escherichia coli chromosome is organized with the left and right chromosome arms in separate cell halves. Mol Microbiol 62: 331-338.
28. Viollier PH, Thanbichler M, McGrath PT, West L, Meewan M, et al. (2004) Rapid and sequential movement of individual chromosomal loci to specific subcellular locations during bacterial DNA replication. Proc Natl Acad Sci U S A 101: 9257-9262.
29. Lemon KP, Grossman AD, (1998) Localization of bacterial DNA polymerase: evidence for a factory model of replication. Science 282: 1516-1519.
30. Jensen RB, Wang SC, Shapiro L, (2001) A moving DNA replication factory in Caulobacter crescentus. EMBO J 20: 4952-4963.
31. Landgraf D, Okumus B, Chien P, Baker TA, Paulsson J, (2012) Segregation of molecules at cell division reveals native protein localization. Nat Methods 9: 480-482.
32. Espeli O, Mercier R, Boccard F, (2008) DNA dynamics vary according to macrodomain topography in the E. coli chromosome. Mol Microbiol 68: 1418-1427.
33. Wang X, Possoz C, Sherratt DJ, (2005) Dancing around the divisome: asymmetric chromosome segregation in Escherichia coli. Genes Dev 19: 2367-2377.
34. Bartosik AA, Lasocki K, Mierzejewska J, Thomas CM, Jagura-Burdzy G, (2004) ParB of Pseudomonas aeruginosa: interactions with its partner ParA and its target parS and specific effects on bacterial growth. J Bacteriol 186: 6983-6998.
35. Ben-Yehuda S, Rudner DZ, Losick R, (2003) RacA, a bacterial protein that anchors chromosomes to the cell poles. Science 299: 532-536.
36. Bowman GR, Comolli LR, Zhu J, Eckart M, Koenig M, et al. (2008) A polymeric protein anchors the chromosomal origin/ParB complex at a bacterial cell pole. Cell 134: 945-955.
37. Ebersbach G, Briegel A, Jensen GJ, Jacobs-Wagner C, (2008) A self-associating protein critical for chromosome attachment, division, and polar organization in caulobacter. Cell 134: 956-968.
38. Yamaichi Y, Bruckner R, Ringgaard S, Moll A, Cameron DE, et al. (2012) A multidomain hub anchors the chromosome segregation and chemotactic machinery to the bacterial pole. Genes Dev 26: 2348-2360.
39. Li Y, Youngren B, Sergueev K, Austin S, (2003) Segregation of the Escherichia coli chromosome terminus. Mol Microbiol 50: 825-834.
40. Mercier R, Petit MA, Schbath S, Robin S, El Karoui M, et al. (2008) The MatP/matS site-specific system organizes the terminus region of the E. coli chromosome into a macrodomain. Cell 135: 475-485.
41. Espeli O, Borne R, Dupaigne P, Thiel A, Gigant E, et al. (2012) A MatP-divisome interaction coordinates chromosome segregation with cell division in E. coli. EMBO J 31: 3198-3211.
42. Jensen RB, (2006) Coordination between chromosome replication, segregation, and cell division in Caulobacter crescentus. J Bacteriol 188: 2244-2253.
43. Srivastava P, Fekete RA, Chattoraj DK, (2006) Segregation of the replication terminus of the two Vibrio cholerae chromosomes. J Bacteriol 188: 1060-1070.
44. Sliusarenko O, Heinritz J, Emonet T, Jacobs-Wagner C, (2011) High-throughput, subpixel precision analysis of bacterial morphogenesis and intracellular spatio-temporal dynamics. Mol Microbiol 80: 612-627.