Phytochrome-interacting factors (PIFs) as bridges between environmental signals and the circadian clock: Diurnal regulation of growth and development

Molecular Plant

Volumn 6, Issue 3, 2013, Pages 592-595

  Shin, Jieun ^a   Anwer, Muhammad Usman ^a   Davis, Seth Jon ^a,b  

^a MAX PLANCK INSTITUTE FOR PLANT BREEDING RESEARCH   (Germany)

^b UNIVERSITY OF YORK   (United Kingdom)

Author keywords

[No Author keywords available]

Indexed keywords

EID: 84878297994     PISSN: 16742052     EISSN: 17529867     Source Type: Journal    
DOI: 10.1093/mp/sst060     Document Type: Article

References (21)

1. Arana, M.V., Marin-de la Rosa, N., Maloof, J.N., Blazquez, M.A., and Alabadi, D. (2011). Circadian oscillation of gibberellin signaling in Arabidopsis. Proc. Natl Acad. Sci. U S A. 108, 9292-9297.
2. Bujdoso, N., and Davis, S.J. (2013). Mathematical modeling of an oscillating gene circuit to unravel the circadian clock network of Arabidopsis thaliana. Frontiers in Plant Science. 4, 3.
3. Covington, M.F., and Harmer, S.L. (2007). The circadian clock regulates auxin signaling and responses in Arabidopsis. PLoS Biol. 5, e222.
4. de Lucas, M., Daviere, J.M., Rodriguez-Falcon, M., Pontin, M., Iglesias-Pedraz, J.M., Lorrain, S., Fankhauser, C., Blazquez, M.A., Titarenko, E., and Prat, S. (2008). A molecular framework for light and gibberellin control of cell elongation. Nature. 451, 480-484.
5. Feng, S., Martinez, C., Gusmaroli, G., Wang, Y., Zhou, J., Wang, F., Chen, L., Yu, L., Iglesias-Pedraz, J.M., Kircher, S., et al. (2008). Coordinated regulation of Arabidopsis thaliana development by light and gibberellins. Nature. 451, 475-479.
6. Hanano, S., Stracke, R., Jakoby, M., Merkle, T., Domagalska, M.A., Weisshaar, B., and Davis, S.J. (2008). A systematic survey in Arabidopsis thaliana of transcription factors that modulate circadian parameters. BMC Genomics. 9, 182.
7. Herrero, E., Kolmos, E., Bujdoso, N., Yuan, Y., Wang, M., Berns, M.C., Uhlworm, H., Coupland, G., Saini, R., Jaskolski, M., et al. (2012). EARLY FLOWERING4 recruitment of EARLY FLOWERING3 in the nucleus sustains the Arabidopsis circadian clock. Plant Cell. 24, 428-443.
8. Hornitschek, P., Kohnen, M.V., Lorrain, S., Rougemont, J., Ljung, K., Lopez-Vidriero, I., Franco-Zorrilla, J.M., Solano, R., Trevisan, M., Pradervand, S., et al. (2012). Phytochrome interacting factors 4 and 5 control seedling growth in changing light conditions by directly controlling auxin signaling. Plant J. 71, 699-711.
9. Koini, M.A., Alvey, L., Allen, T., Tilley, C.A., Harberd, N.P., Whitelam, G.C., and Franklin, K.A. (2009). High temperature-mediated adaptations in plant architecture require the bHLH transcription factor PIF4. Curr. Biol. 19, 408-413.
10. Kolmos, E., Herrero, E., Bujdoso, N., Millar, A.J., Tóth, R., Gyula, P., Nagy, F., and Davis, S.J. (2011). A reduced-function allele reveals that EARLY FLOWERING3 repressive action on the circadian clock is modulated by phytochrome signals in Arabidopsis. Plant Cell. 23, 3230-3246.
11. Leivar, P., Monte, E., Oka, Y., Liu, T., Carle, C., Castillon, A., Huq, E., and Quail, P.H. (2008). Multiple phytochrome-interacting bHLH transcription factors repress premature seedling photomorphogenesis in darkness. Curr. Biol. 18, 1815-1823.
12. Leivar, P., Monte, E., Cohn, M.M., and Quail, P.H. (2012). Phytochrome signaling in green Arabidopsis seedlings: impact assessment of a mutually negative phyB-PIF feedback loop. Mol. Plant. 5, 734-749.
13. Martinez-Garcia, J.F., Huq, E., and Quail, P.H. (2000). Direct targeting of light signals to a promoter element-bound transcription factor. Science. 288, 859-863.
14. McClung, C.R., and Davis, S.J. (2010). Ambient thermometers in plants: from physiological outputs towards mechanisms of thermal sensing. Curr. Biol. 20, R1086-R1092.
15. Nomoto, Y., Kubozono, S., Yamashino, T., Nakamichi, N., and Mizuno, T. (2012). Circadian clock- and PIF4-controlled plant growth: a coincidence mechanism directly integrates a hormone signaling network into the photoperiodic control of plant architectures in Arabidopsis thaliana. Plant Cell Physiol. 53, 1950-1964.
16. Nozue, K., Covington, M.F., Duek, P.D., Lorrain, S., Fankhauser, C., Harmer, S.L., and Maloof, J.N. (2007). Rhythmic growth explained by coincidence between internal and external cues. Nature. 448, 358-361.
17. Nusinow, D.A., Helfer, A., Hamilton, E.E., King, J.J., Imaizumi, T., Schultz, T.F., Farre, E.M., and Kay, S.A. (2011). The ELF4-ELF3- LUX complex links the circadian clock to diurnal control of hypocotyl growth. Nature. 475, 398-402.
18. Oh, E., Kang, H., Yamaguchi, S., Park, J., Lee, D., Kamiya, Y., and Choi, G. (2009). Genome-wide analysis of genes targeted by PHYTOCHROME INTERACTING FACTOR 3-LIKE5 during seed germination in Arabidopsis. Plant Cell. 21, 403-419.
19. Pfeiffer, A., Nagel, M.K., Popp, C., Wust, F., Bindics, J., Viczian, A., Hiltbrunner, A., Nagy, F., Kunkel, T., and Schafer, E. (2012). Interaction with plant transcription factors can mediate nuclear import of phytochrome B. Proc. Natl Acad. Sci. U S A. 109, 5892-5897.
20. Shin, J., Kim, K., Kang, H., Zulfugarov, I.S., Bae, G., Lee, C.H., Lee, D., and Choi, G. (2009). Phytochromes promote seedling light responses by inhibiting four negatively-acting phytochromeinteracting factors. Proc. Natl Acad. Sci. U S A. 106, 7660-7665.
21. Soy, J., Leivar, P., Gonzalez-Schain, N., Sentandreu, M., Prat, S., Quail, P.H., and Monte, E. (2012). Phytochrome-imposed oscillations in PIF3 protein abundance regulate hypocotyl growth under diurnal light/dark conditions in Arabidopsis. Plant J. 71, 390-401.