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Volumn 13, Issue 7, 2013, Pages 212-224

The embryonic expression patterns of zebrafish genes encoding LysM-domains

Author keywords

CNS; LysM domains; OXR; TLDc domains; Zebrafish

Indexed keywords

OXIDATION RESISTANCE 1; OXIDATION RESISTANCE 2; PROTEIN; PROTEIN LYSM; UNCLASSIFIED DRUG;

EID: 84878143594     PISSN: 1567133X     EISSN: 18727298     Source Type: Journal    
DOI: 10.1016/j.gep.2013.02.007     Document Type: Article
Times cited : (19)

References (43)
  • 1
    • 42549103340 scopus 로고    scopus 로고
    • LysM, a widely distributed protein motif for binding to (peptido)glycans
    • DOI 10.1111/j.1365-2958.2008.06211.x
    • G. Buist, A. Steen, J. Kok, and O.P. Kuipers LysM, a widely distributed protein motif for binding to (peptido)glycans Mol. Microbiol. 68 4 2008 838 847 Review (Pubitemid 351581067)
    • (2008) Molecular Microbiology , vol.68 , Issue.4 , pp. 838-847
    • Buist, G.1    Steen, A.2    Kok, J.3    Kuipers, O.P.4
  • 2
    • 20444471564 scopus 로고    scopus 로고
    • AcmA of Lactococcus lactis is an N-acetylglucosaminidase with an optimal number of LysM domains for proper functioning
    • DOI 10.1111/j.1742-4658.2005.04706.x
    • A. Steen, G. Buist, G.J. Horsburgh, G. Venema, O.P. Kuipers, S.J. Foster, and J. Kok AcmA of Lactococcus lactis is an N-acetylglucosaminidase with an optimal number of LysM domains for proper functioning FEBS J. 272 11 2005 Jun 2854 2868 (Pubitemid 40825430)
    • (2005) FEBS Journal , vol.272 , Issue.11 , pp. 2854-2868
    • Steen, A.1    Buist, G.2    Horsburgh, G.J.3    Venema, G.4    Kuipers, O.P.5    Foster, S.J.6    Kok, J.7
  • 7
    • 45149090440 scopus 로고    scopus 로고
    • A LysM receptor-like kinase plays a critical role in chitin signaling and fungal resistance in Arabidopsis
    • DOI 10.1105/tpc.107.056754
    • J. Wan, X.C. Zhang, D. Neece, K.M. Ramonell, S. Clough, S.Y. Kim, M.G. Stacey, and G. Stacey A. LysM receptor-like kinase plays a critical role in chitin signaling and fungal resistance in Arabidopsis Plant Cell 20 2 2008 471 481 (Pubitemid 352844025)
    • (2008) Plant Cell , vol.20 , Issue.2 , pp. 471-481
    • Wan, J.1    Zhang, X.-C.2    Neece, D.3    Ramonell, K.M.4    Clough, S.5    Kim, S.-Y.6    Stacey, M.G.7    Staceya, G.8
  • 11
    • 83755195019 scopus 로고    scopus 로고
    • Arabidopsis Lysin-motif proteins LYM1 LYM3 CERK1 mediate bacterial peptidoglycan sensing and immunity to bacterial infection
    • (Published online 2011 November 21. doi: 10.1073/pnas.1112862108)
    • Willmann, Heini M. Lajunen, Gitte Erbs, Mari-Anne Newman, Dagmar Kolb, Kenichi Tsuda, Fumiaki Katagiri, Judith Fliegmann, Jean-Jacques Bono, Julie V. Cullimore, Anna K. Jehle, Friedrich Götz, Andreas Kulik, Antonio Molinaro, Volker Lipka, Andrea A. Gust, Thorsten Nürnberger. (2012). Arabidopsis Lysin-motif proteins LYM1 LYM3 CERK1 mediate bacterial peptidoglycan sensing and immunity to bacterial infection. Proc Natl Acad Sci U S A. 108 (49) (2011) 19824-19829 (Published online 2011 November 21. doi: 10.1073/pnas.1112862108).
    • (2012) Proc Natl Acad Sci U S A. , vol.108 , Issue.49 , pp. 19824-19829
    • Willmann1    Heini, M.2    Lajunen3
  • 13
    • 34147115163 scopus 로고    scopus 로고
    • The OXR domain defines a conserved family of eukaryotic oxidation resistance proteins
    • DOI 10.1186/1471-2121-8-13, 13
    • M. Durand, A. Kolpak, T. Farrell, N.A. Elliott, W. Shao, M. Brown, and M.R. Volkert The OXR domain defines a conserved family of eukaryotic oxidation resistance proteins BMC Cell Biol. 8 2007 2007 13 (Pubitemid 46554643)
    • (2007) BMC Cell Biology , vol.8 , pp. 13
    • Durand, M.1    Kolpak, A.2    Farrell, T.3    Elliott, N.A.4    Shao, W.5    Brown, M.6    Volkert, M.R.7
  • 15
    • 0036234545 scopus 로고    scopus 로고
    • ERAP140, a conserved tissue-specific nuclear receptor coactivator
    • DOI 10.1128/MCB.22.10.3358-3372.2002
    • W. Shao, S. Halachmi, and M. Brown ERAP140, a conserved tissue-specific nuclear receptor coactivator Mol Cell Biol. 22 10 2002 3358 3372 (Pubitemid 34453977)
    • (2002) Molecular and Cellular Biology , vol.22 , Issue.10 , pp. 3358-3372
    • Shao, W.1    Halachmi, S.2    Brown, M.3
  • 16
    • 55949117369 scopus 로고    scopus 로고
    • Genome wide transcriptional profiling in breast cancer cells reveals distinct changes in hormone receptor target genes and chromatin modifying enzymes after proteasome inhibition
    • H.K. Kinyamu, J.B. Collins, S.F. Grissom, P.B. Hebbar, and T.K. Archer Genome wide transcriptional profiling in breast cancer cells reveals distinct changes in hormone receptor target genes and chromatin modifying enzymes after proteasome inhibition Mol. Carcinog. 47 11 2008 845 885
    • (2008) Mol. Carcinog. , vol.47 , Issue.11 , pp. 845-885
    • Kinyamu, H.K.1    Collins, J.B.2    Grissom, S.F.3    Hebbar, P.B.4    Archer, T.K.5
  • 18
    • 48849104458 scopus 로고    scopus 로고
    • (2008) ERAP140/Nbla10993 is a novel favorable prognostic indicator for neuroblastoma induced in response to retinoic acid
    • H. Arai, T. Ozaki, H. Niizuma, Y. Nakamura, M. Ohira, K. Takano, M. Matsumoto, and A. Nakagawara (2008) ERAP140/Nbla10993 is a novel favorable prognostic indicator for neuroblastoma induced in response to retinoic acid Oncol. Rep. 19 6 2008 1381 1388
    • (2008) Oncol. Rep. , vol.19 , Issue.6 , pp. 1381-1388
    • Arai, H.1    Ozaki, T.2    Niizuma, H.3    Nakamura, Y.4    Ohira, M.5    Takano, K.6    Matsumoto, M.7    Nakagawara, A.8
  • 22
    • 33845331098 scopus 로고    scopus 로고
    • No association between the Nuclear Receptor Coactivator 7 gene and schizophrenia in the Chinese Han population
    • DOI 10.1016/j.schres.2006.07.020, PII S0920996406003446
    • Y. Liu, Y. Shi, T. Guo, J. Gao, W. Qin, S. Li, W. Tang, G. Feng, S. Zhu, H. Liu, and L. He No association between the Nuclear Receptor Coactivator 7 gene and schizophrenia in the Chinese Han population Schizophr. Res. 89 1-3 2007 360 361 (Pubitemid 44881280)
    • (2007) Schizophrenia Research , vol.89 , Issue.1-3 , pp. 360-361
    • Liu, Y.1    Shi, Y.2    Guo, T.3    Gao, J.4    Qin, W.5    Li, S.6    Tang, W.7    Feng, G.8    Zhu, S.9    Liu, H.10    He, L.11
  • 25
    • 80955133076 scopus 로고    scopus 로고
    • Purification, crystallization and preliminary crystallographic studies of the TLDc domain of oxidation resistance protein 2 from zebrafish
    • 2011
    • Alsarraf HM, Laroche FJF, Spaink H, Thirup S, Blaise M. (2011). Purification, crystallization and preliminary crystallographic studies of the TLDc domain of oxidation resistance protein 2 from zebrafish. Acta Crystallogr Sect F Struct Biol Cryst Commun. 67 (Pt 10) (2011) 1253-6.
    • (2011) Acta Crystallogr Sect F Struct Biol Cryst Commun. , vol.67 , Issue.PART 10 , pp. 1253-1256
    • Alsarraf, H.M.1    Fjf, L.2    Spaink, H.3    Thirup, S.4    Blaise, M.5
  • 27
    • 0034306454 scopus 로고    scopus 로고
    • GRAM, a novel domain in glucosyltransferases, myotubularins and other putative membrane-associated proteins
    • T. Doerks, M. Strauss, M. Brendel, and P. Bork GRAM, a novel domain in glucosyltransferases, myotubularins and other putative membrane-associated proteins Trends Biochem Sci. 25 10 2000 483 485
    • (2000) Trends Biochem Sci. , vol.25 , Issue.10 , pp. 483-485
    • Doerks, T.1    Strauss, M.2    Brendel, M.3    Bork, P.4
  • 28
    • 0033199881 scopus 로고    scopus 로고
    • The 82F late puff contains the L82 gene, an essential member of a novel gene family
    • DOI 10.1006/dbio.1999.9358
    • R.S. Stowers, S. Russell, and D. Garza The 82F late puff contains the L82 gene, an essential member of a novel gene family Dev. Biol. 213 1 1999 116 130 (Pubitemid 29409950)
    • (1999) Developmental Biology , vol.213 , Issue.1 , pp. 116-130
    • Stowers, R.S.1    Russell, S.2    Garza, D.3
  • 29
    • 84860341520 scopus 로고    scopus 로고
    • The Drosophila protein mustard tailors the innate immune response activated by the immune deficiency pathway
    • Apr 15 Epub 2012 Mar 16 2012
    • Wang Z, Berkey CD, Watnick PI. (2012). The Drosophila protein mustard tailors the innate immune response activated by the immune deficiency pathway. J Immunol. 2012 Apr 15;188(8):3993-4000. Epub 2012 Mar 16.
    • (2012) J Immunol. , vol.188 , Issue.8 , pp. 3993-4000
    • Wang, Z.1    Berkey, C.D.2    Watnick, P.I.3
  • 30
    • 77956194450 scopus 로고    scopus 로고
    • The Anopheles gambiae oxidation resistance 1 (OXR1) gene regulates expression of enzymes that detoxify reactive oxygen species
    • Jun 17 2010
    • Jaramillo-Gutierrez G, Molina-Cruz A, Kumar S, Barillas-Mury C. (2010). The Anopheles gambiae oxidation resistance 1 (OXR1) gene regulates expression of enzymes that detoxify reactive oxygen species. PLoS One. 2010 Jun 17;5(6):e11168.
    • (2010) PLoS One. , vol.5 , Issue.6
    • Jaramillo-Gutierrez, G.1    Molina-Cruz, A.2    Kumar, S.3    Barillas-Mury, C.4
  • 31
    • 34247197937 scopus 로고    scopus 로고
    • The nonsense-mediated decay RNA surveillance pathway
    • Review 2007
    • Chang YF, Imam JS, Wilkinson MF. (2007). The nonsense-mediated decay RNA surveillance pathway. Annu Rev Biochem. 2007; 76:51-74. Review.
    • (2007) Annu Rev Biochem , vol.76 , pp. 51-74
    • Chang, Y.F.1    Imam, J.S.2    Wilkinson, M.F.3
  • 32
    • 68149128399 scopus 로고    scopus 로고
    • Early molecular events in PAMP-triggered immunity
    • Aug 2009
    • Zipfel C. (2009). Early molecular events in PAMP-triggered immunity. Curr Opin Plant Biol. 2009 Aug; 12(4):414-20.
    • (2009) Curr Opin Plant Biol , vol.12 , Issue.4 , pp. 414-420
    • Zipfel, C.1
  • 33
    • 66949159845 scopus 로고    scopus 로고
    • Transcriptome profiling and functional analyses of the zebrafish embryonic innate immune response to Salmonella infection
    • May 1 2009
    • Stockhammer OW, Zakrzewska A, Hegedûs Z, Spaink HP, Meijer AH. (2009). Transcriptome profiling and functional analyses of the zebrafish embryonic innate immune response to Salmonella infection. J Immunol. 2009 May 1; 182 (9):5641-53.
    • (2009) J Immunol. , vol.182 , Issue.9 , pp. 5641-5653
    • Stockhammer, O.W.1    Zakrzewska, A.2    Hegedûs, Z.3    Spaink, H.P.4    Meijer, A.H.5
  • 35
    • 67349189190 scopus 로고    scopus 로고
    • Specificity of the zebrafish host transcriptome response to acute and chronic mycobacterial infection and the role of innate and adaptive immune components
    • Jul 2009
    • Van der Sar AM, Spaink HP, Zakrzewska A, Bitter W, Meijer AH. (2009). Specificity of the zebrafish host transcriptome response to acute and chronic mycobacterial infection and the role of innate and adaptive immune components. Mol Immunol. 2009 Jul; 46 (11-12):2317-32.
    • (2009) Mol Immunol. , vol.46 , Issue.11-12 , pp. 2317-2332
    • Van Der Sar, A.M.1    Spaink, H.P.2    Zakrzewska, A.3    Bitter, W.4    Meijer, A.H.5
  • 38
    • 84891879774 scopus 로고    scopus 로고
    • 3D Visual Integration of Spatio-Temporal Gene Expression Patterns on Digital Atlas of Zebrafish Embryo using Web Services. Proceedings Int. Conf. Advances in Communication and Information Technology (CIT 2011)
    • D. Potikanond, and F.J. Verbeek 3D Visual Integration of Spatio-Temporal Gene Expression Patterns on Digital Atlas of Zebrafish Embryo using Web Services. Proceedings Int. Conf. Advances in Communication and Information Technology (CIT 2011) Amsterdam 2011 2011 56 62
    • (2011) Amsterdam , vol.2011 , pp. 56-62
    • Potikanond, D.1    Verbeek, F.J.2
  • 40
    • 77952478221 scopus 로고    scopus 로고
    • Data Integration for Spatio-Temporal Patterns of Gene Expression of Zebrafish development: The GEMS database
    • 2008
    • Belmamoune M. and Verbeek FJ. (2008). Data Integration for Spatio-Temporal Patterns of Gene Expression of Zebrafish development: the GEMS database. Journal of Integrative, BioInformatics, 5(2):92, 2008.
    • (2008) Journal of Integrative, BioInformatics , vol.5 , Issue.2 , pp. 92
    • Belmamoune, M.1    Verbeek, F.J.2
  • 41
    • 77954462046 scopus 로고    scopus 로고
    • Mining and analysing spatio-temporal patterns of gene expression in an integrative database framework
    • 1-10, 2010
    • Belmamoune M, Potikanond D, Verbeek FJ. (2010). Mining and analysing spatio-temporal patterns of gene expression in an integrative database framework. Journal of Integrative, Bioinformatics, 7(3):128, 1-10, 2010.
    • (2010) Journal of Integrative, Bioinformatics , vol.7 , Issue.3 , pp. 128
    • Belmamoune, M.1    Potikanond, D.2    Verbeek, F.J.3
  • 42
    • 84864536811 scopus 로고    scopus 로고
    • Structural/functional analysis of the human OXR1 protein: Identification of exon 8 as the anti-oxidant encoding function (2012)
    • Published, online 2012 August 8. doi: 10.1186/1471-2199-13-26
    • Murphy KC, Volkert MR. Structural/functional analysis of the human OXR1 protein: identification of exon 8 as the anti-oxidant encoding function (2012). BMC Mol Biol. 2012; 13: 26. Published, online 2012 August 8. doi: 10.1186/1471-2199-13-26.
    • (2012) BMC Mol Biol. , vol.13 , pp. 26
    • Murphy, K.C.1    Volkert, M.R.2
  • 43
    • 1842690628 scopus 로고    scopus 로고
    • Myotubularin Regulates the Function of the Late Endosome Through the GRAM Domain-Phosphatidylinositol 3,5-Bisphosphate Interaction
    • DOI 10.1074/jbc.M312294200
    • K. Tsujita, T. Itoh, T. Ijuin, A. Yamamoto, and A. Shisheva Myotubularin regulates the function of the late endosome through the gram domain-phosphatidylinositol 3,5-bisphosphate interaction J Biol Chem. 2004 279 2004 13817 13824 (Pubitemid 38468913)
    • (2004) Journal of Biological Chemistry , vol.279 , Issue.14 , pp. 13817-13824
    • Tsujita, K.1    Itoh, T.2    Ijuin, T.3    Yamamoto, A.4    Shisheva, A.5    Laporte, J.6    Takenawa, T.7


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