Characterization of a novel swollenin from Penicillium oxalicum in facilitating enzymatic saccharification of cellulose

BMC Biotechnology

Volumn 13, Issue , 2013, Pages

  Kang, Kang ^a,b   Wang, Shaowen ^a   Lai, Guohong ^a   Liu, Gang ^a   Xing, Miao ^a  

^a SHENZHEN UNIVERSITY   (China)

^b NORTHWEST A F UNIVERSITY   (China)

Author keywords

Cellulase; Cellulose; Expansin; Penicillium oxalicum; Swollenin; Trichoderma reesei

Indexed keywords

CELLULASE; EXPANSIN; PENICILLIUM OXALICUM; SWOLLENIN; TRICHODERMA REESEI;

CRYSTALLINE MATERIALS; ENZYME ACTIVITY; GENE ENCODING; RECOMBINANT PROTEINS; SACCHARIFICATION;

CELLULOSE;

CELLULOSE; CELLULOSE 1,4 BETA CELLOBIOSIDASE; FUNGAL PROTEIN; GLUCAN SYNTHASE; SWOLLENIN; UNCLASSIFIED DRUG;

ARTICLE; CONTROLLED STUDY; HYDROLYSIS; HYPOCREA JECORINA; MOLECULAR CLONING; NONHUMAN; PENICILLIUM; PENICILLIUM OXALICUM; POLYMERASE CHAIN REACTION; PROTEIN ISOLATION; SACCHARIFICATION;

AMINO ACID SEQUENCE; CELLULASE; CELLULOSE; CLONING, MOLECULAR; FUNGAL PROTEINS; HYDROLYSIS; MOLECULAR SEQUENCE DATA; PENICILLIUM; RECOMBINANT PROTEINS; TRICHODERMA;

BIOMASS; CELLULOSE DERIVATIVES; ENZYMATIC ACTIVITY; FUNGI; GENES; HYDROLYSIS; PLANTS; SACCHARIFICATION;

FUNGI; HYPOCREA JECORINA; PENICILLIUM OXALICUM;

EID: 84877858594     PISSN: None     EISSN: 14726750     Source Type: Journal    
DOI: 10.1186/1472-6750-13-42     Document Type: Article

References (35)

1. Mansfield SD, Mooney C, Saddler JN. Substrate and enzyme characteristics that limit cellulose hydrolysis. Biotechnol Prog 1999, 15(5):804-816. 10.1021/bp9900864, 10514250.
2. Somerville C, Bauer S, Brininstool G, Facette M, Hamann T, Milne J, Osborne E, Paredez A, Persson S, Raab T. Toward a systems approach to understanding plant cell walls. Science 2004, 306(5705):2206-2211. 10.1126/science.1102765, 15618507.
3. Wood TM, McCrae SI, Bhat KM. The mechanism of fungal cellulase action. Synergism between enzyme components of Penicillium pinophilum cellulase in solubilizing hydrogen bond-ordered cellulose. Biochem J 1989, 260(1):37-43. 1138622, 2549957.
4. Laureano-Perez L, Teymouri F, Alizadeh H, Dale BE. Understanding factors that limit enzymatic hydrolysis of biomass: characterization of pretreated corn stover. Appl Biochem Biotechnol 2005, 121-124:1081-1099.
5. Arantes V, Saddler JN. Access to cellulose limits the efficiency of enzymatic hydrolysis: the role of amorphogenesis. Biotechnology for biofuels 2010, 3:4-15. 10.1186/1754-6834-3-4, 2844368, 20178562.
6. Himmel ME, Ding SY, Johnson DK, Adney WS, Nimlos MR, Brady JW, Foust TD. Biomass recalcitrance: engineering plants and enzymes for biofuels production. Science 2007, 315(5813):804-807. 10.1126/science.1137016, 17289988.
7. McQueen-Mason S, Cosgrove DJ. Disruption of hydrogen bonding between plant cell wall polymers by proteins that induce wall extension. Proc Natl Acad Sci U S A 1994, 91(14):6574-6578. 10.1073/pnas.91.14.6574, 44245, 11607483.
8. Whitney SE, Gidley MJ, McQueen-Mason SJ. Probing expansin action using cellulose/hemicellulose composites. Plant J 2000, 22(4):327-334. 10.1046/j.1365-313x.2000.00742.x, 10849349.
9. Cosgrove DJ. Growth of the plant cell wall. Nat Rev Mol Cell Biol 2005, 6(11):850-861. 10.1038/nrm1746, 16261190.
10. Saloheimo M, Paloheimo M, Hakola S, Pere J, Swanson B, Nyyssonen E, Bhatia A, Ward M, Penttila M. Swollenin, a Trichoderma reesei protein with sequence similarity to the plant expansins, exhibits disruption activity on cellulosic materials. Eur J Biochem 2002, 269(17):4202-4211. 10.1046/j.1432-1033.2002.03095.x, 12199698.
11. Yao Q, Sun TT, Liu WF, Chen GJ. Gene cloning and heterologous expression of a novel endoglucanase, swollenin, from Trichoderma pseudokoningii S38. Biosci Biotechnol Biochem 2008, 72(11):2799-2805. 10.1271/bbb.80124, 18997434.
12. Wang M, Cai J, Huang L, Lv Z, Zhang Y, Xu Z. High-level expression and efficient purification of bioactive swollenin in Aspergillus oryzae. Appl Biochem Biotechnol 2010, 162(7):2027-2036. 10.1007/s12010-010-8978-0, 20446057.
13. Wang Y, Tang R, Tao J, Gao G, Wang X, Mu Y, Feng Y. Quantitative investigation of non-hydrolytic disruptive activity on crystalline cellulose and application to recombinant swollenin. Appl Microbiol Biotechnol 2011, 91(5):1353-1363. 10.1007/s00253-011-3421-1, 21732246.
14. Levasseur A, Saloheimo M, Navarro D, Andberg M, Monot F, Nakari-Setala T, Asther M, Record E. Production of a chimeric enzyme tool associating the Trichoderma reesei swollenin with the Aspergillus niger feruloyl esterase A for release of ferulic acid. Appl Microbiol Biotechnol 2006, 73(4):872-880. 10.1007/s00253-006-0546-8, 16957894.
15. Jager G, Girfoglio M, Dollo F, Rinaldi R, Bongard H, Commandeur U, Fischer R, Spiess AC, Buchs J. How recombinant swollenin from Kluyveromyces lactis affects cellulosic substrates and accelerates their hydrolysis. Biotechnology for biofuels 2011, 4(1):33-93. 10.1186/1754-6834-4-33, 3203333, 21943248.
16. Dutta T, Sahoo R, Sengupta R, Ray SS, Bhattacharjee A, Ghosh S. Novel cellulases from an extremophilic filamentous fungi Penicillium citrinum: production and characterization. J Ind Microbiol Biotechnol 2008, 35(4):275-282. 10.1007/s10295-008-0304-2, 18210175.
17. Martins LF, Kolling D, Camassola M, Dillon AJ, Ramos LP. Comparison of penicillium echinulatum and trichoderma reesei cellulases in relation to their activity against various cellulosic substrates. Bioresour Technol 2008, 99(5):1417-1424. 10.1016/j.biortech.2007.01.060, 17408952.
18. Liao H, Xu C, Tan S, Wei Z, Ling N, Yu G, Raza W, Zhang R, Shen Q, Xu Y. Production and characterization of acidophilic xylanolytic enzymes from Penicillium oxalicum GZ-2. Bioresour Technol 2012, 123:117-124.
19. Wang J, Mai G, Liu G, Yu S. Molecular cloning and heterologous expression of an acid-stable endoxylanase gene from penicillium oxalicum in trichoderma reesei. J Microbiol Biotechnol 2013, 23(2):251-259. 10.4014/jmb.1208.08030, 23412069.
20. Camassola M, De Bittencourt LR, Shenem NT, Andreaus J, Dillon AJP. Characterization of the cellulase complex of Penicillium echinulatum. Biocatalysis and Biotransformation 2004, 22(5-6):391-396.
21. Dillon AJP, Camassola M, Henriques JAP, Fungaro MHP, Azevedo ACS, Velho TAF, Laguna SE. Generation of recombinants strains to cellulases production by protoplast fusion between Penicillium echinulatum and Trichoderma harzianum. Enzyme Microb Technol 2008, 43(6):403-409.
22. Prosite http://prosite.expasy.org/.
23. ProtParam http://web.expasy.org/protparam/.
24. Chen XA, Ishida N, Todaka N, Nakamura R, Maruyama J, Takahashi H, Kitamoto K. Promotion of efficient Saccharification of crystalline cellulose by Aspergillus fumigatus Swo1. Appl Environ Microbiol 2010, 76(8):2556-2561. 10.1128/AEM.02499-09, 2849193, 20173066.
25. Baker JO, King MR, Adney WS, Decker SR, Vinzant TB, Lantz SE, Nieves RE, Thomas SR, Li LC, Cosgrove DJ. Investigation of the cell-wall loosening protein expansin as a possible additive in the enzymatic saccharification of lignocellulosic biomass. Appl Biochem Biotechnol 2000, 84-86:217-223.
26. Wei W, Yang C, Luo J, Lu C, Wu Y, Yuan S. Synergism between cucumber alpha-expansin, fungal endoglucanase and pectin lyase. J Plant Physiol 2010, 167(14):1204-1210. 10.1016/j.jplph.2010.03.017, 20478643.
27. Hong J, Ye X, Zhang YH. Quantitative determination of cellulose accessibility to cellulase based on adsorption of a nonhydrolytic fusion protein containing CBM and GFP with its applications. Langmuir 2007, 23(25):12535-12540. 10.1021/la7025686, 17988165.
28. Zhang YH, Lynd LR. Toward an aggregated understanding of enzymatic hydrolysis of cellulose: noncomplexed cellulase systems. Biotechnol Bioeng 2004, 88(7):797-824. 10.1002/bit.20282, 15538721.
29. Durand H, Clanet M, Tiraby G. Genetic improvement of Trichoderma reesei for large scale cellulase production. Enzyme Microb Technol 1988, 10(6):341-346.
30. Rahman Z, Shida Y, Furukawa T, Suzuki Y, Okada H, Ogasawara W, Morikawa Y. Evaluation and characterization of Trichoderma reesei cellulase and xylanase promoters. Appl Microbiol Biotechnol 2009, 82(5):899-908. 10.1007/s00253-008-1841-3, 19148637.
31. Reese ET, Siu RG, Levinson HS. The biological degradation of soluble cellulose derivatives and its relationship to the mechanism of cellulose hydrolysis. J Bacteriol 1950, 59(4):485-497. 385789, 15436422.
32. Mandels M, Reese E. Fungal cellulases and the microbial decomposition of cellulosic fabric, (Volume 5). J Ind Microbiol Biotechnol 1999, 22(4):225-240.
33. Stewart CN, Via LE. A rapid CTAB DNA isolation technique useful for RAPD fingerprinting and other PCR applications. Biotechniques 1993, 14(5):748-750.
34. Liu YG, Chen Y. High-efficiency thermal asymmetric interlaced PCR for amplification of unknown flanking sequences. Biotechniques 2007, 43(5):649-654. 10.2144/000112601, 18072594.
35. Wang SW, Xing M, Liu G, Yu SW, Wang J, Tian SL. Improving cellulase production in Trichoderma koningii through RNA interference on ace1 gene expression. J Microbiol Biotechnol 2012, 22(8):1133-1140. 10.4014/jmb.1112.12037, 22713991.