-
1
-
-
77249160634
-
Automated imaging of neuronal activity in freely behaving Caenorhabditis elegans
-
amp;
-
Ben Arous, J., Ben Arous, J., Tanizawa Y., Rabinowitch I. & Chatenay D., Schafer W.R. 2010. Automated imaging of neuronal activity in freely behaving Caenorhabditis elegans. J. Neurosci. Methods 187, 229-234.
-
(2010)
J. Neurosci. Methods
, vol.187
, pp. 229-234
-
-
Ben Arous, J.1
Ben Arous, J.2
Tanizawa, Y.3
Rabinowitch, I.4
Chatenay, D.5
Schafer, W.R.6
-
2
-
-
1542285823
-
Lucas-Kanade 20 years on: a unifying framework
-
Baker, S. & Matthews, I. 2004. Lucas-Kanade 20 years on: a unifying framework. Int. J. Comput. Vision 56, 221-255.
-
(2004)
Int. J. Comput. Vision
, vol.56
, pp. 221-255
-
-
Baker, S.1
Matthews, I.2
-
3
-
-
14044268199
-
Real-time image-based tracking of planes using efficient second-order minimization
-
Benhimane, S. & Malis, E. 2004. Real-time image-based tracking of planes using efficient second-order minimization. IEEE/RSJ. Int. Conf. Intel Robots and Systems 1, 943-948.
-
(2004)
IEEE/RSJ. Int. Conf. Intel Robots and Systems
, vol.1
, pp. 943-948
-
-
Benhimane, S.1
Malis, E.2
-
4
-
-
79952189489
-
Micropilot: automation of fluorescence microscopy-based imaging for systems biology
-
amp;
-
Conrad, C., Wünsche A., Tan T. H., Bulkescher J., Sieckmann F., Verissimo F., Edelstein A., Walter T., Liebel U. & Pepperkok R., Ellenberg J. 2011. Micropilot: automation of fluorescence microscopy-based imaging for systems biology. Nat. Methods 8, 246-249.
-
(2011)
Nat. Methods
, vol.8
, pp. 246-249
-
-
Conrad, C.1
Wünsche, A.2
Tan, T.H.3
Bulkescher, J.4
Sieckmann, F.5
Verissimo, F.6
Edelstein, A.7
Walter, T.8
Liebel, U.9
Pepperkok, R.10
Ellenberg, J.11
-
5
-
-
77957714521
-
Computer control of microscopes using μManager
-
amp;
-
Edelstein, A., Amodaj N., Hoover K. & Vale R., Stuurman N. 2010. Computer control of microscopes using μManager. Curr. Protoc. Mol. Biol. 92, 14.20.1-14.20.17.
-
(2010)
Curr. Protoc. Mol. Biol.
, vol.92
, pp. 14201-142017
-
-
Edelstein, A.1
Amodaj, N.2
Hoover, K.3
Vale, R.4
Stuurman, N.5
-
6
-
-
84863208608
-
Biological imaging software tools
-
Eliceiri, K. W., Berthold, M. R., Goldberg, I. G., Ibáñez, L., Manjunath, B. S., Martone, M. E., Murphy, R. F., Peng, H., Plant, A. L., Roysam, B., Stuurman, N., Swedlow, J. R., Tomancak, P. & Carpenter, A. E. 2012. Biological imaging software tools. Nat. Methods, 9, 697-710.
-
(2012)
Nat. Methods
, vol.9
, pp. 697-710
-
-
Eliceiri, K.W.1
Berthold, M.R.2
Goldberg, I.G.3
Ibáñez, L.4
Manjunath, B.S.5
Martone, M.E.6
Murphy, R.F.7
Peng, H.8
Plant, A.L.9
Roysam, B.10
Stuurman, N.11
Swedlow, J.R.12
Tomancak, P.13
Carpenter, A.E.14
-
7
-
-
80053227766
-
An image-free opto-mechanical system for creating virtual environments and imaging neuronal activity in freely moving Caenorhabditis elegans
-
Faumont, S., Faumont, S., Rondeau, G., Thiele, T. R., Lawton, K. J., McCormick, K. E., Sottile, M., Griesbeck, O., Heckscher, E. S., Roberts, W. M., Doe, C. Q. & Lockery, S. R. 2011. An image-free opto-mechanical system for creating virtual environments and imaging neuronal activity in freely moving Caenorhabditis elegans. PLoS ONE 6, e24666.
-
(2011)
PLoS ONE
, vol.6
-
-
Faumont, S.1
Faumont, S.2
Rondeau, G.3
Thiele, T.R.4
Lawton, K.J.5
McCormick, K.E.6
Sottile, M.7
Griesbeck, O.8
Heckscher, E.S.9
Roberts, W.M.10
Doe, C.Q.11
Lockery, S.R.12
-
8
-
-
84873546612
-
Exploration of brain function through behavior,neural activity observation, and optogenetic manipulation
-
Fei, X. & Hashimoto, K. 2012. Exploration of brain function through behavior, neural activity observation, and optogenetic manipulation. Int. Symp. Optomechatronic Tech. 1-7.
-
(2012)
Int. Symp. Optomechatronic Tech.
, pp. 1-7
-
-
Fei, X.1
Hashimoto, K.2
-
9
-
-
25444433592
-
Detection of nuclei in 4D Nomarski DIC microscope images of early Caenorhabditis elegans embryos using local image entropy and object tracking
-
amp; . .
-
Hamahashi, S., Onami, S. & Kitano, H. 2005. Detection of nuclei in 4D Nomarski DIC microscope images of early Caenorhabditis elegans embryos using local image entropy and object tracking. BMC Bioinformatics 6, 125.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 125
-
-
Hamahashi, S.1
Onami, S.2
Kitano, H.3
-
10
-
-
0003792312
-
-
New Jersey, USA: Prentice Hall.
-
Kailath, T. 1980. Linear Systems. New Jersey, USA: Prentice Hall.
-
(1980)
Linear Systems
-
-
Kailath, T.1
-
11
-
-
50049107101
-
Practical guide of live imaging for developmental biologists
-
Kato, K. & Hayashi, S. 2008. Practical guide of live imaging for developmental biologists. Dev. Growth Differ. 50, 381-390.
-
(2008)
Dev. Growth Differ.
, vol.50
, pp. 381-390
-
-
Kato, K.1
Hayashi, S.2
-
12
-
-
84867328205
-
Controlling interneuron activity in Caenorhabditis elegans to evoke chemotactic behaviour
-
Kocabas, A., Shen, C. H., Guo, Z. V. & Ramanathan, S. 2012. Controlling interneuron activity in Caenorhabditis elegans to evoke chemotactic behaviour. Nature 490, 273-277.
-
(2012)
Nature
, vol.490
, pp. 273-277
-
-
Kocabas, A.1
Shen, C.H.2
Guo, Z.V.3
Ramanathan, S.4
-
13
-
-
1542373218
-
Input-output analysis of multirate feedback systems
-
Kranc, G. 1957. Input-output analysis of multirate feedback systems. Trans. Automat. Contr. 3, 21-28.
-
(1957)
Trans. Automat. Contr.
, vol.3
, pp. 21-28
-
-
Kranc, G.1
-
14
-
-
79959260556
-
Neural coding in a single sensory neuron controlling opposite seeking behaviours in Caenorhabditis elegans
-
amp;
-
Kuhara, A., Ohnishi, N. & Shimowada T., Mori I. 2011. Neural coding in a single sensory neuron controlling opposite seeking behaviours in Caenorhabditis elegans. Nat. Commun. 2, 355.
-
(2011)
Nat. Commun.
, vol.2
, pp. 355
-
-
Kuhara, A.1
Ohnishi, N.2
Shimowada, T.3
Mori, I.4
-
15
-
-
33750810263
-
High-content screening: emerging hardware and software technologies
-
Lee, S. & Howell, B. J. 2006. High-content screening: emerging hardware and software technologies. Meth. enzymol 414, 468-483.
-
(2006)
Meth. enzymol
, vol.414
, pp. 468-483
-
-
Lee, S.1
Howell, B.J.2
-
16
-
-
79551556801
-
Optogenetic manipulation of neural activity in freely moving Caenorhabditis elegans
-
amp; .. . .
-
Leifer, A. M., Fang-Yen, C., Gershow, M., Alkema, M.J. & Samuel, A.D.. 2011. Optogenetic manipulation of neural activity in freely moving Caenorhabditis elegans. Nat. Methods 8, 147-152.
-
(2011)
Nat. Methods
, vol.8
, pp. 147-152
-
-
Leifer, A.M.1
Fang-Yen, C.2
Gershow, M.3
Alkema, M.J.4
Samuel, A.D.5
-
17
-
-
79952809494
-
Fluorescent microscope system to track a particular region of C. elegans
-
amp; . . . -.
-
Maru, M., Igarashi, Y., Arai, S. & Hashimoto, K.. 2010. Fluorescent microscope system to track a particular region of C. elegans. IEEE/SICE. Int. Sympo. Sys. Integration 347-352.
-
(2010)
IEEE/SICE. Int. Sympo. Sys. Integration
, pp. 347-352
-
-
Maru, M.1
Igarashi, Y.2
Arai, S.3
Hashimoto, K.4
-
19
-
-
1842422015
-
Survey over image thresholding techniques and quantitative performance evaluation
-
Mehmet, S. & Sankur, B. 2004. Survey over image thresholding techniques and quantitative performance evaluation. J. Electron. Imaging 13, 146-165.
-
(2004)
J. Electron. Imaging
, vol.13
, pp. 146-165
-
-
Mehmet, S.1
Sankur, B.2
-
20
-
-
3242706582
-
Expanded dynamic range of fluorescent indicators for Ca(2 + ) by circularly permuted yellow fluorescent proteins
-
Nagai, T., Yamada, S., Tominaga, T., Ichikawa M. & Miyawaki A. 2004. Expanded dynamic range of fluorescent indicators for Ca(2 + ) by circularly permuted yellow fluorescent proteins. Proc. Natl Acad. Sci. USA 101, 10554-10559.
-
(2004)
Proc. Natl Acad. Sci. USA
, vol.101
, pp. 10554-10559
-
-
Nagai, T.1
Yamada, S.2
Tominaga, T.3
Ichikawa, M.4
Miyawaki, A.5
-
22
-
-
0018306059
-
A threshold selection method from gray-level histograms
-
Otsu, N. 1979. A threshold selection method from gray-level histograms. IEEE. Trans. Syst. Man. Cybern. 9, 62-66.
-
(1979)
IEEE. Trans. Syst. Man. Cybern.
, vol.9
, pp. 62-66
-
-
Otsu, N.1
-
23
-
-
50549104043
-
Bioimage informatics: a new area of engineering biology
-
Peng, H. 2008. Bioimage informatics: a new area of engineering biology. Bioinformatics 24, 1827-1836.
-
(2008)
Bioinformatics
, vol.24
, pp. 1827-1836
-
-
Peng, H.1
-
24
-
-
81055129601
-
The neural circuits and synaptic mechanisms underlying motor initiation in C. elegans
-
Piggott, B. J., Liu, J., Feng, Z., Wescott, S. A. & Xu, X. Z. 2011. The neural circuits and synaptic mechanisms underlying motor initiation in C. elegans. Cell 147, 922-933.
-
(2011)
Cell
, vol.147
, pp. 922-933
-
-
Piggott, B.J.1
Liu, J.2
Feng, Z.3
Wescott, S.A.4
Xu, X.Z.5
-
25
-
-
77954995399
-
A guide to super-resolution fluorescence microscopy
-
amp; . .
-
Schermelleh, L., Heintzmann, R. & Leonhardt, H. 2010. A guide to super-resolution fluorescence microscopy. J. Cell Biol. 190, 165-175.
-
(2010)
J. Cell Biol.
, vol.190
, pp. 165-175
-
-
Schermelleh, L.1
Heintzmann, R.2
Leonhardt, H.3
-
26
-
-
84863205849
-
NIH Image to ImageJ: 25 years of image analysis
-
amp; . .
-
Schneider, C. A., Rasband, W. S. & Eliceiri, K. W. 2012. NIH Image to ImageJ: 25 years of image analysis. Nat. Methods 9, 671-675.
-
(2012)
Nat. Methods
, vol.9
, pp. 671-675
-
-
Schneider, C.A.1
Rasband, W.S.2
Eliceiri, K.W.3
-
28
-
-
84867054062
-
An inexpensive Arduino-based LED stimulator system for vision research
-
Teikari, P., Najjar, R. P., Malkki, H., Knoblauch, K., Dumortier, D., Gronfier, C. & Cooper, H. M. 2012. An inexpensive Arduino-based LED stimulator system for vision research. J. Neurosci. Methods 211, 227-236.
-
(2012)
J. Neurosci. Methods
, vol.211
, pp. 227-236
-
-
Teikari, P.1
Najjar, R.P.2
Malkki, H.3
Knoblauch, K.4
Dumortier, D.5
Gronfier, C.6
Cooper, H.M.7
-
29
-
-
0027797858
-
Autofocusing for tissue microscopy
-
Yeo, T. T. E., Ong, S. H. & Jayasooriah, Sinniah R. 1993. Autofocusing for tissue microscopy. Image Vis. Comput. 11, 629-639.
-
(1993)
Image Vis. Comput.
, vol.11
, pp. 629-639
-
-
Yeo, T.T.E.1
Ong, S.H.2
Jayasooriah, S.R.3
|