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Volumn 280, Issue 1762, 2013, Pages

Inferring patterns of influenza transmission in swine from multiple streams of surveillance data

Author keywords

Disease ecology; Infectious disease surveillance; Influenza; State space model; Swine; Zoonosis

Indexed keywords

DATA SET; DISEASE; DISEASE PREVALENCE; DISEASE TRANSMISSION; EPIDEMIOLOGY; ESTIMATION METHOD; INFECTIOUS DISEASE; INFLUENZA; MAMMAL;

EID: 84877333059     PISSN: 09628452     EISSN: 14712954     Source Type: Journal    
DOI: 10.1098/rspb.2013.0872     Document Type: Article
Times cited : (13)

References (34)
  • 1
    • 40049110238 scopus 로고    scopus 로고
    • Swine influenza virus: Zoonotic potential and vaccination strategies for the control of avian and swine influenzas
    • (doi:10.1086/524988)
    • Thacker E, Janke B. 2008 Swine influenza virus: zoonotic potential and vaccination strategies for the control of avian and swine influenzas. J. Infect. Dis. 197, S19-S24. (doi:10.1086/524988)
    • (2008) J. Infect. Dis , vol.197
    • Thacker, E.1    Janke, B.2
  • 3
    • 67650407532 scopus 로고    scopus 로고
    • Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans
    • (doi:10.1126/science.1176225)
    • Garten RJ et al. 2009 Antigenic and genetic characteristics of swine-origin 2009 A(H1N1) influenza viruses circulating in humans. Science 325, 197-201.(doi:10.1126/science.1176225)
    • (2009) Science , vol.325 , pp. 197-201
    • Garten, R.J.1
  • 4
    • 67649538978 scopus 로고    scopus 로고
    • Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic
    • (doi:10.1038/ nature08182)
    • Smith GJD et al. 2009 Origins and evolutionary genomics of the 2009 swine-origin H1N1 influenza A epidemic. Nature 459, 1122-1125. (doi:10.1038/ nature08182)
    • (2009) Nature , vol.459 , pp. 1122-1125
    • Smith, G.J.D.1
  • 5
    • 0034815075 scopus 로고    scopus 로고
    • Cocirculation of avian H9N2 and contemporary 'human' H3N2 influenza A viruses in pigs in southeastern China: Potential for genetic reassortment
    • (doi:10.1128/JVI.75.20.9679-9686.2001)
    • Peiris JSM, Guan Y, Markwell D, Ghose P, Webster RG, Shortridge KF. 2001 Cocirculation of avian H9N2 and contemporary 'human' H3N2 influenza A viruses in pigs in southeastern China: potential for genetic reassortment? J. Virol. 75, 9679-9686. (doi:10.1128/JVI.75.20.9679-9686.2001)
    • (2001) J. Virol , vol.75 , pp. 9679-9686
    • Peiris, J.S.M.1    Guan, Y.2    Markwell, D.3    Ghose, P.4    Webster, R.G.5    Shortridge, K.F.6
  • 6
    • 79957602568 scopus 로고    scopus 로고
    • Long-term evolution and transmission dynamics of swine influenza A virus
    • (doi:10.1038/nature10004)
    • Vijaykrishna D et al. 2011 Long-term evolution and transmission dynamics of swine influenza A virus. Nature 473, 519-522. (doi:10.1038/nature10004)
    • (2011) Nature , vol.473 , pp. 519-522
    • Vijaykrishna, D.1
  • 7
    • 84919201360 scopus 로고
    • Dynamic generalized linear models and Bayesian forecasting
    • (doi:10.1080/ 01621459.1985.10477131)
    • West M, Harrison PJ, Migon HS. 1985 Dynamic generalized linear models and Bayesian forecasting. J. Am. Stat. Assoc. 80, 73-83. (doi:10.1080/ 01621459.1985.10477131)
    • (1985) J. Am. Stat. Assoc , vol.80 , pp. 73-83
    • West, M.1    Harrison, P.J.2    Migon, H.S.3
  • 8
    • 9244230097 scopus 로고    scopus 로고
    • Population time series: Process variability, observation errors, missing values, lags, and hidden states
    • (doi:10.1890/03-0520)
    • Clark JS, Bjornstad ON. 2004 Population time series: process variability, observation errors, missing values, lags, and hidden states. Ecology 85, 3140-3150. (doi:10.1890/03-0520)
    • (2004) Ecology , vol.85 , pp. 3140-3150
    • Clark, J.S.1    Bjornstad, O.N.2
  • 9
    • 33750951314 scopus 로고    scopus 로고
    • Serological profiles after consecutive experimental infections of pigs with European H1N1, H3N2, and H1N2 swine influenza viruses
    • (doi:10.1089/vim.2006.19.373)
    • Van Reeth K, Labarque G, Pensaert M. 2006 Serological profiles after consecutive experimental infections of pigs with European H1N1, H3N2, and H1N2 swine influenza viruses. Viral Immunol. 19, 373-382. (doi:10.1089/vim.2006.19.373)
    • (2006) Viral Immunol , vol.19 , pp. 373-382
    • van Reeth, K.1    Labarque, G.2    Pensaert, M.3
  • 10
    • 79957952357 scopus 로고    scopus 로고
    • The influence of age and maternal antibodies on the postvaccinal response against swine influenza viruses in pigs
    • (doi:10.1016/j.vetimm.2011.03.019)
    • Markowska-Daniel I, Pomorska-Mól M, Pejsak Z. 2011 The influence of age and maternal antibodies on the postvaccinal response against swine influenza viruses in pigs. Vet. Immunol. Immunopathol. 142, 81-86. (doi:10.1016/j.vetimm.2011.03.019)
    • (2011) Vet. Immunol. Immunopathol , vol.142 , pp. 81-86
    • Markowska-Daniel, I.1    Pomorska-Mól, M.2    Pejsak, Z.3
  • 11
    • 0020321450 scopus 로고
    • An influenza epicentre?
    • (doi:10.1016/ S0140-6736(82)92693-9)
    • Shortridge KF, Stuart-Harris CH. 1982 An influenza epicentre? Lancet 320, 812-813. (doi:10.1016/ S0140-6736(82)92693-9)
    • (1982) Lancet , vol.320 , pp. 812-813
    • Shortridge, K.F.1    Stuart-Harris, C.H.2
  • 12
    • 79957613635 scopus 로고    scopus 로고
    • China: Pork powerhouse of the world
    • Wang R. 2006 China: pork powerhouse of the world. Adv. Pork Prod. 17, 33-46.
    • (2006) Adv. Pork Prod , vol.17 , pp. 33-46
    • Wang, R.1
  • 15
    • 0036255403 scopus 로고    scopus 로고
    • Salmonella enterica infections in market swine with and without transport and holding
    • (doi:10.1128/AEM.68.5.2376-2381.2002)
    • Hurd HS, McKean JD, Griffith RW, Wesley IV, Rostagno MH. 2002 Salmonella enterica infections in market swine with and without transport and holding. Appl. Environ. Microbiol. 68, 2376-2381. (doi:10.1128/AEM.68.5.2376-2381.2002)
    • (2002) Appl. Environ. Microbiol , vol.68 , pp. 2376-2381
    • Hurd, H.S.1    McKean, J.D.2    Griffith, R.W.3    Wesley, I.V.4    Rostagno, M.H.5
  • 16
    • 43749099616 scopus 로고    scopus 로고
    • Lairage during transport of eighteenkilogram pigs has an impact on innate immunity and commensal bacteria diversity in the intestines
    • (doi:10.2527/jas.2007-0592)
    • Williams JL, Minton JE, Patterson JA, Marchant Forde J, Eicher SD. 2008 Lairage during transport of eighteenkilogram pigs has an impact on innate immunity and commensal bacteria diversity in the intestines. J. Anim. Sci. 86, 1232-1244. (doi:10.2527/jas.2007-0592)
    • (2008) J. Anim. Sci , vol.86 , pp. 1232-1244
    • Williams, J.L.1    Minton, J.E.2    Patterson, J.A.3    Marchant Forde, J.4    Eicher, S.D.5
  • 19
    • 84857276419 scopus 로고    scopus 로고
    • Modern pig farming in the People's Republic of China: Growth and veterinary challenges
    • McOrist S, Khampee K, Guo A. 2011 Modern pig farming in the People's Republic of China: growth and veterinary challenges. Rev. Sci. Tech. 30, 961-968.
    • (2011) Rev. Sci. Tech , vol.30 , pp. 961-968
    • McOrist, S.1    Khampee, K.2    Guo, A.3
  • 20
    • 36049040617 scopus 로고    scopus 로고
    • Emergence of a highly pathogenic porcine reproductive and respiratory syndrome virus in the mid-eastern region of
    • (doi:10.1016/j.tvjl.2007.07.032)
    • Li Y, Wang X, Bo K, Wang X, Tang B, Yang B, Jiang W, Jiang P. 2007 Emergence of a highly pathogenic porcine reproductive and respiratory syndrome virus in the mid-eastern region of China. Vet. J. 174, 577-584. (doi:10.1016/j.tvjl.2007.07.032)
    • (2007) China. Vet. J , vol.174 , pp. 577-584
    • Li, Y.1    Wang, X.2    Bo, K.3    Wang, X.4    Tang, B.5    Yang, B.6    Jiang, W.7    Jiang, P.8
  • 21
    • 84858765441 scopus 로고    scopus 로고
    • Swine influenza surveillance in east and southeast Asia: A systematic review
    • (doi:10.1017/S1466252311000181)
    • Trevennec K, Cowling BJ, Peyre M, Baudon E, Martineau GP, Roger F. 2011 Swine influenza surveillance in east and southeast Asia: a systematic review. Anim. Health Res. Rev. 12, 213-223. (doi:10.1017/S1466252311000181)
    • (2011) Anim. Health Res. Rev , vol.12 , pp. 213-223
    • Trevennec, K.1    Cowling, B.J.2    Peyre, M.3    Baudon, E.4    Martineau, G.P.5    Roger, F.6
  • 22
    • 0033650684 scopus 로고    scopus 로고
    • Virologic and serologic surveillance for human, swine and avian influenza virus infections among pigs in the north-central United States
    • (doi:10.1007/ s007050070098)
    • Olsen CW, Carey S, Hinshaw L, Karasin AI. 2000 Virologic and serologic surveillance for human, swine and avian influenza virus infections among pigs in the north-central United States. Arch. Virol. 145, 1399-1419. (doi:10.1007/ s007050070098)
    • (2000) Arch. Virol , vol.145 , pp. 1399-1419
    • Olsen, C.W.1    Carey, S.2    Hinshaw, L.3    Karasin, A.I.4
  • 23
    • 84860617807 scopus 로고    scopus 로고
    • H5N1: How to track a flu virus
    • (doi:10.1038/483535a)
    • Webby R. 2012 H5N1: How to track a flu virus. Nature 483, 535-536. (doi:10.1038/483535a)
    • (2012) Nature , vol.483 , pp. 535-536
    • Webby, R.1
  • 24
    • 58249112203 scopus 로고    scopus 로고
    • Seroprevalence of H1N1, H3N2 and H1N2 influenza viruses in pigs in seven European countries in 2002-2003
    • (doi:10.1111/j.1750-2659. 2008.00043.x)
    • Van Reeth K et al. 2008 Seroprevalence of H1N1, H3N2 and H1N2 influenza viruses in pigs in seven European countries in 2002-2003. Influenza Other Resp. Viruses 2, 99-105. (doi:10.1111/j.1750-2659. 2008.00043.x)
    • (2008) Influenza Other Resp. Viruses , vol.2 , pp. 99-105
    • van Reeth, K.1
  • 25
    • 79951509985 scopus 로고    scopus 로고
    • Seroprevalence and genetic characteristics of five subtypes of influenza A viruses in the Chinese pig population: A pooled data analysis
    • (doi:10.1016/j.tvjl. 2009.10.026)
    • Liu W, Wei M-T, Tong Y, Tang F, Zhang L, Fang L, Yang H, Cao W-C. 2011 Seroprevalence and genetic characteristics of five subtypes of influenza A viruses in the Chinese pig population: a pooled data analysis. Vet. J. 187, 200-206. (doi:10.1016/j.tvjl. 2009.10.026)
    • (2011) Vet. J , vol.187 , pp. 200-206
    • Liu, W.1    Wei, M.-T.2    Tong, Y.3    Tang, F.4    Zhang, L.5    Fang, L.6    Yang, H.7    Cao, W.-C.8
  • 26
    • 70350599175 scopus 로고    scopus 로고
    • Quantifying the impact of immune escape on transmission dynamics of influenza
    • (doi: 10.1126/science. 1175980)
    • Park AW, Daly JM, Lewis NS, Smith DJ, Wood JLN, Grenfell BT. 2009 Quantifying the impact of immune escape on transmission dynamics of influenza. Science 326, 726-728. (doi: 10.1126/science. 1175980)
    • (2009) Science , vol.326 , pp. 726-728
    • Park, A.W.1    Daly, J.M.2    Lewis, N.S.3    Smith, D.J.4    Wood, J.L.N.5    Grenfell, B.T.6
  • 27
    • 0344838385 scopus 로고    scopus 로고
    • Effect of maternally derived antibodies on the clinical signs and immune response in pigs after primary and secondary infection with an influenza H1N1 virus
    • (doi:10.1016/ S0165-2427(03)00019-9)
    • Loeffen WLA, Heinen PP, Bianchi ATJ, Hunneman WA, Verheijden JHM. 2003 Effect of maternally derived antibodies on the clinical signs and immune response in pigs after primary and secondary infection with an influenza H1N1 virus. Vet. Immunol. Immunopathol. 92, 23-35. (doi:10.1016/ S0165-2427(03)00019-9)
    • (2003) Vet. Immunol. Immunopathol , vol.92 , pp. 23-35
    • Loeffen, W.L.A.1    Heinen, P.P.2    Bianchi, A.T.J.3    Hunneman, W.A.4    Verheijden, J.H.M.5
  • 28
    • 2442587211 scopus 로고    scopus 로고
    • Genetic relationships, serological cross-reaction and cross-protection between H1N2 and other influenza A virus subtypes endemic in European pigs
    • (doi:10.1016/j.virusres.2004.02. 023)
    • Van Reeth K, Brown I, Essen S, Pensaert M. 2004 Genetic relationships, serological cross-reaction and cross-protection between H1N2 and other influenza A virus subtypes endemic in European pigs. Virus Res. 103, 115-124. (doi:10.1016/j.virusres.2004.02. 023)
    • (2004) Virus Res , vol.103 , pp. 115-124
    • van Reeth, K.1    Brown, I.2    Essen, S.3    Pensaert, M.4
  • 29
    • 79952622203 scopus 로고    scopus 로고
    • Genetic and antigenic characterization of H1 influenza viruses from United States swine from 2008
    • (doi:10.1099/vir.0.027557-0)
    • Lorusso A et al. 2011 Genetic and antigenic characterization of H1 influenza viruses from United States swine from 2008. J. Gen. Virol. 92, 919-930. (doi:10.1099/vir.0.027557-0)
    • (2011) J. Gen. Virol , vol.92 , pp. 919-930
    • Lorusso, A.1
  • 30
    • 0034701743 scopus 로고    scopus 로고
    • The epidemiology and evolution of influenza viruses in pigs
    • (doi:10.1016/S0378-1135(00)00164-4)
    • Brown IH. 2000 The epidemiology and evolution of influenza viruses in pigs. Vet. Microbiol. 74, 29-46. (doi:10.1016/S0378-1135(00)00164-4)
    • (2000) Vet. Microbiol , vol.74 , pp. 29-46
    • Brown, I.H.1
  • 31
    • 2442499081 scopus 로고    scopus 로고
    • Multiple lineages of antigenically and genetically diverse influenza A virus co-circulate in the United States swine population
    • (doi:10.1016/j.virusres.2004.02.015)
    • Webby RJ, Rossow K, Erickson G, Sims Y, Webster R. 2004 Multiple lineages of antigenically and genetically diverse influenza A virus co-circulate in the United States swine population. Virus Res. 103, 67-73. (doi:10.1016/j.virusres.2004.02.015)
    • (2004) Virus Res , vol.103 , pp. 67-73
    • Webby, R.J.1    Rossow, K.2    Erickson, G.3    Sims, Y.4    Webster, R.5
  • 32
    • 69249138339 scopus 로고    scopus 로고
    • Diversity of influenza viruses in swine and the emergence of a novel human pandemic influenza A (H1N1)
    • (doi:10.1111/j.1750-2659.2009.00096.x)
    • Brockwell-Staats C, Webster RG, Webby RJ. 2009 Diversity of influenza viruses in swine and the emergence of a novel human pandemic influenza A (H1N1). Influenza Other Resp. Viruses 3, 207-213. (doi:10.1111/j.1750-2659.2009.00096.x)
    • (2009) Influenza Other Resp. Viruses , vol.3 , pp. 207-213
    • Brockwell-Staats, C.1    Webster, R.G.2    Webby, R.J.3
  • 33
    • 79955767867 scopus 로고    scopus 로고
    • Relationship between clinical signs and transmission of an infectious disease and the implications for control
    • (doi:10.1126/science. 1199884)
    • Charleston B et al. 2011 Relationship between clinical signs and transmission of an infectious disease and the implications for control. Science 332, 726-729. (doi:10.1126/science. 1199884)
    • (2011) Science , vol.332 , pp. 726-729
    • Charleston, B.1
  • 34
    • 77954196403 scopus 로고    scopus 로고
    • PyMC: Bayesian stochastic modelling in Python
    • Patil A, Huard D, Fonnesbeck CJ. 2010 PyMC: Bayesian stochastic modelling in Python. J. Stat. Softw. 35, 1-81.
    • (2010) J. Stat. Softw , vol.35 , pp. 1-81
    • Patil, A.1    Huard, D.2    Fonnesbeck, C.J.3


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