Molecular mechanism research on simultaneous therapy of brain and heart based on data mining and network analysis

Zhongguo Zhongyao Zazhi

Volumn 38, Issue 1, 2013, Pages 91-98

  Chen, Di ^a   Lu, Peng ^a,b   Zhang, Fang Bo ^b   Tang, Shi Huan ^b   Yang, Hong Jun ^a  

^a INSTITUTE OF AUTOMATION   (China)

^b INSTITUTE OF CHINESE MATERIA MEDICA   (China)

Author keywords

Buchang Naoxintong formulae; Data mining; Molecular mechanism; Network analysis; Treat heart and brain simultaneously

Indexed keywords

BUCHANG NAOXINTONG; HERBACEOUS AGENT; UNCLASSIFIED DRUG;

ALGORITHM; ARTICLE; BRAIN DISEASE; CEREBROVASCULAR ACCIDENT; CHINESE MEDICINE; DATA MINING; DRUG FORMULARY; DRUG MECHANISM; HEART DISEASE; ISCHEMIC HEART DISEASE; MOLECULAR BIOLOGY; PROTEIN PROTEIN INTERACTION; THEORY;

CORONARY DISEASE; DATA MINING; DRUGS, CHINESE HERBAL; HUMANS; PROTEIN BINDING; PROTEIN INTERACTION MAPS; STROKE;

EID: 84877073052     PISSN: 10015302     EISSN: None     Source Type: Journal    
DOI: 10.4268/cjcmm20130119     Document Type: Article

References (29)

1. 2008, 3(3): 129.
2. 2011, 11: 61.
3. 2007, 47 (34): 119.
4. 2012, 12(25):149.
5. 2010, 22(4):31.
6. 2003, 31(4):1.
7. 2006, 12(9):650.
8. Yildirim M A, Goh K I, Cusick M E, et al. Drug-target network [J]. Nat Biotechnol, 2007, 25:1119.
9. Yamanishi Y, Araki M, Gutteridge A, et al. Prediction of drug-target interaction network from the integration of chemical and genomic spaces[J]. Bioinformatics, 2008, 24:232.
10. Wu X, Jiang R, Zhang M Q, et al. Network-based global inference of human disease genes [J]. Mol Sys Biol, 2008, 4: 189.
11. Hopkins A L. Network pharmacology: the next paradigm in drug discovery[J]. Nat Chem Biol, 2008, 4(11):682.
12. 2011, 36(15):2017.
13. Stark C, Breitkreutz B J, Chatr-Aryaniontri A, et al. The bio-GRID interaction database:2011 update [J]. Nucleic Acids Res, 2011, 39(supp1): 698.
14. Kerrien S, Aranda B, Breuza L, et al. The IntAct molecular interaction database in 2012 [J]. Nucleic Acids Res, 2012, 40: 841.
15. Keshava Prasad T S, Goel R, Kandasamy K, et al. Human protein reference database-2009 Update [J]. Nucleic Acids Res, 2009, 37: 767.
16. von Mering C, Jensen L J, Snel B, et al. STRING: known and predicted protein-protein associations, integrated and transferred across organisms [J]. Nucleic Acids Res, 2005, 33:433.
17. Mostafavi S, Ray D, Warde-Farley D, et al. GeneMANIA: a real-time multiple association network integration algorithm for predicting gene function[J]. Genome Biology, 2008, 9(S1):4.
18. Hamosh A, Scott A F, Amberger J S, et al. Online mendelian inheritance in man (OMIM), a knowledgebase of human genes and genetic disorders[J]. Nucleic Acids Res, 2005, 33: 514.
19. Bruford E A, Lush M J, Wright M W, et al. The HGNC database in 2008: a resource for the human genome [J]. Nucleic Acids Res, 2008, 36:445.
20. Kanehisa M, Goto S, Furumichi M, et al. KEGG for representation and analysis of molecular networks involving diseases and drugs [J]. Nucleic Acids Res, 2010, 38: 355.
21. Wang Y, Xiao J, Suzek T O, et al. PubChem: a public information system for analyzing bioactivities of small molecules [J]. Nucleic Acids Res, 2009, 37:623.
22. Godden J W, Xue L, Bajorath J, et al. Combinatorial preferences affect molecular similarity/diversity calculations using binary fingerprints and tanimoto coefficients[J]. J Chem Inf Comput Sci, 2000, 40(1):163.
23. Dantzig G B. On the shortest route through a network [J]. Management Sci, 1960, 6(2):187.
24. Marques J P, Written Wu, Y F Trans. Pattern Recognition Concepts, Methods and Applications[M]. 2nd edition, Beijing: Tsinghua University Press, 2002:51.
25. Fred A L N, Leitäo J M N. Partitional vs hierarchical clustering using a minimum grammar complexity approach[J]. Advances in Pattern Recognition, 2000(1876): 193.
26. Agrawal R, Srikant R. Fast algorithms for mining association rules [C]. San Jose: In Proceeding of the 20th International Conference on Very Large Databases, 1994:487.
27. Lusis A J, Fogelman A M, Fonarow G C. Genetic basis of atherosclerosis: Part I: new genes and pathways [J]. Circulation, 2004, 110:1868.
28. Kovacic S, Bakran M. Genetic susceptibility to atherosclerosis [J]. Stroke Res Treatment, 2012 (12): 5.
29. Alygina N A, Kostomarova I V, Vodolagina N N, et al. The genes of atherosclerosis and cardiovascular diseases [J]. Klin Med, 2011, 89(3): 14.