-
1
-
-
38749097060
-
A novel method of illustrating microfungi
-
Barber PA, Keane PJ. 2007. A novel method of illustrating microfungi. Fungal Diversity 27: 1-10.
-
(2007)
Fungal Diversity
, vol.27
, pp. 1-10
-
-
Barber, P.A.1
Keane, P.J.2
-
2
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Research 32: 1792-1797. http://dx.doi.org/10. 1093/nar/gkh340
-
(2004)
Nucleic Acids Research
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
4
-
-
0036119217
-
A rapid and efficient assay for extracting DNA from fungi
-
Griffin, DW, Kellogg CA, Peak KK, Shinn EA. 2002. A rapid and efficient assay for extracting DNA from fungi. Letters in Applied Microbiology: 34: 210-214. http://dx.doi.org/10.1046/j.1472-765x.2002.01071.x
-
(2002)
Letters in Applied Microbiology
, vol.34
, pp. 210-214
-
-
Griffin, D.W.1
Kellogg, C.A.2
Peak, K.K.3
Shinn, E.A.4
-
10
-
-
84856857194
-
Phylogenetic relationships of five genera of Xylariales and Rosasphaeria gen. nov (Hypocreales)
-
Jaklitsch WM, Voglmayr H. 2012. Phylogenetic relationships of five genera of Xylariales and Rosasphaeria gen. nov (Hypocreales). Fungal Diversity 52: 75-98. http://dx.doi.org/10.1007/s13225-011-0104-2
-
(2012)
Fungal Diversity
, vol.52
, pp. 75-98
-
-
Jaklitsch, W.M.1
Voglmayr, H.2
-
12
-
-
36049014495
-
Whatever happened to the Pyrenomycetes and Loculoascomycetes?
-
Lumbsch HT, Huhndorf SM. 2007. Whatever happened to the Pyrenomycetes and Loculoascomycetes? Mycological Research 111: 1064-1074. http://dx.doi.org/10. 1016/j.mycres.2007.04.004
-
(2007)
Mycological Research
, vol.111
, pp. 1064-1074
-
-
Lumbsch, H.T.1
Huhndorf, S.M.2
-
13
-
-
79952433921
-
Black mildew fungi (Meliolaceae) associated with Schinus terebinthifolius (Brazilian pepper tree) in Brazil
-
Macedo DM, Pinho DB, Barreto RW, Cuda JP, Pereira OL. 2010. Black mildew fungi (Meliolaceae) associated with Schinus terebinthifolius (Brazilian pepper tree) in Brazil. Mycotaxon 114: 429-437. http://dx.doi.org/10.5248/114.429
-
(2010)
Mycotaxon
, vol.114
, pp. 429-437
-
-
MacEdo, D.M.1
Pinho, D.B.2
Barreto, R.W.3
Cuda, J.P.4
Pereira, O.L.5
-
15
-
-
14144255695
-
Multi-gene phylogenies indicate ascomal wall morphology is a better predictor of phylogenetic relationships than ascospore morphology in the Sordariales (Ascomycota, Fungi)
-
Miller NA, Huhndorf SM. 2005. Multi-gene phylogenies indicate ascomal wall morphology is a better predictor of phylogenetic relationships than ascospore morphology in the Sordariales (Ascomycota, Fungi). Molecular Phylogenetics and Evolution 35: 60-75. http://dx.doi.org/10.1016/j.ympev.2005. 01.007
-
(2005)
Molecular Phylogenetics and Evolution
, vol.35
, pp. 60-75
-
-
Miller, N.A.1
Huhndorf, S.M.2
-
16
-
-
78751558547
-
Creating the CIPRES Science Gateway for inference of large phylogenetic trees
-
14 Nov. 2010, New Orleans, LA
-
Miller MA, Pfeiffer W, Schwartz T. 2010. Creating the CIPRES Science Gateway for inference of large phylogenetic trees. 1-8, in: Proceedings of the Gateway Computing Environments Workshop (GCE), 14 Nov. 2010, New Orleans, LA
-
(2010)
Proceedings of the Gateway Computing Environments Workshop (GCE)
, pp. 1-8
-
-
Miller, M.A.1
Pfeiffer, W.2
Schwartz, T.3
-
17
-
-
77957794340
-
Wood and bark anatomy of Centella: Scalariform perforation plates support an affinity with the subfamily Mackinlayoideae (Apiaceae)
-
Oskolski AA, Van Wyk BE. 2010. Wood and bark anatomy of Centella: scalariform perforation plates support an affinity with the subfamily Mackinlayoideae (Apiaceae). Plant Systematics and Evolution 289: 127-135. http://dx.doi.org/10.1007/s00606-010-0338-6
-
(2010)
Plant Systematics and Evolution
, vol.289
, pp. 127-135
-
-
Oskolski, A.A.1
Van Wyk, B.E.2
-
18
-
-
73149094984
-
Black mildew disease on the neotropical medicinal shrub Pothomorphe umbellata in Brazil, caused by Irenopsis tortuosa var. potomorphes
-
Pinho DB, Pereira OL, Nicoli A, Honorato-Junior J, Bragança CAD. 2009. Black mildew disease on the neotropical medicinal shrub Pothomorphe umbellata in Brazil, caused by Irenopsis tortuosa var. potomorphes. Australasian Plant Disease Notes 4: 84-86.
-
(2009)
Australasian Plant Disease Notes
, vol.4
, pp. 84-86
-
-
Pinho, D.B.1
Pereira, O.L.2
Nicoli, A.3
Honorato-Junior, J.4
Bragança, C.A.D.5
-
19
-
-
84857301729
-
New Meliolaceae from the Brazilian Atlantic Forest 1. Species on hosts in the families Asteraceae, Burseraceae, Euphorbiaceae, Fabaceae and Sapindaceae
-
Pinho DB, Pereira OL, Firmino AL, Silva M, Ferreira-Junior WG, Barreto RW. 2012. New Meliolaceae from the Brazilian Atlantic Forest 1. Species on hosts in the families Asteraceae, Burseraceae, Euphorbiaceae, Fabaceae and Sapindaceae. Mycologia 104: 121-137. http://dx.doi.org/10.3852/10-260
-
(2012)
Mycologia
, vol.104
, pp. 121-137
-
-
Pinho, D.B.1
Pereira, O.L.2
Firmino, A.L.3
Silva, M.4
Ferreira-Junior, W.G.5
Barreto, R.W.6
-
20
-
-
6344278678
-
Recent advances in understanding Apiales and a revised classification
-
Plunkett GM, Chandler GT, Lowry PP, Pinney SM, Sprenkle TS. 2004. Recent advances in understanding Apiales and a revised classification. South African Journal of Botany 70: 371-381.
-
(2004)
South African Journal of Botany
, vol.70
, pp. 371-381
-
-
Plunkett, G.M.1
Chandler, G.T.2
Lowry, P.P.3
Pinney, S.M.4
Sprenkle, T.S.5
-
21
-
-
9644301241
-
Model selection and model averaging in phylogenetics: Advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests
-
Posada D, Buckley TR. 2004. Model selection and model averaging in phylogenetics: advantages of Akaike information criterion and Bayesian approaches over likelihood ratio tests. Systematic Biology 53: 793-808. http://dx.doi.org/10.1080/10635150490522304
-
(2004)
Systematic Biology
, vol.53
, pp. 793-808
-
-
Posada, D.1
Buckley, T.R.2
-
22
-
-
69949149163
-
-
[Verified 15 January 2012]
-
Rambaut A. 2009. FigTree 1.2.2. Available at: http://tree.bio.ed.ac.uk/ software/figtree/ [Verified 15 January 2012]
-
(2009)
FigTree 1.2.2
-
-
Rambaut, A.1
-
23
-
-
5344230543
-
-
Oxford, UK: University of Oxford., [Verified 15 January 2012]
-
Rambaut A, Drummond A. 2003. Tracer MCMC trace analysis tool. Oxford, UK: University of Oxford. Available at: http://tree.bio.ed.ac.uk/software/tracer/ [Verified 15 January 2012]
-
(2003)
Tracer MCMC Trace Analysis Tool
-
-
Rambaut, A.1
Drummond, A.2
-
24
-
-
0029818407
-
Probability distribution of molecular evolutionary trees: A new method of phylogenetic inference
-
Rannala B, Yang Z. 1996. Probability distribution of molecular evolutionary trees: a new method of phylogenetic inference. Journal of Molecular Evolution 43: 304-311. http://dx.doi.org/10.1007/BF02338839
-
(1996)
Journal of Molecular Evolution
, vol.43
, pp. 304-311
-
-
Rannala, B.1
Yang, Z.2
-
25
-
-
36148975397
-
Two new species of Appendiculella (Meliolaceae) from Panama
-
Rodriguez D, Piepenbring M. 2007. Two new species of Appendiculella (Meliolaceae) from Panama. Mycologia 99: 544-552. http://dx.doi.org/10.3852/ mycologia.99.4.544
-
(2007)
Mycologia
, vol.99
, pp. 544-552
-
-
Rodriguez, D.1
Piepenbring, M.2
-
27
-
-
0041386108
-
MrBayes 3: Bayesian phylogenetic inference under mixed models
-
Ronquist F, Heulsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574. http://dx.doi.org/ 10.1093/bioinformatics/btg180
-
(2003)
Bioinformatics
, vol.19
, pp. 1572-1574
-
-
Ronquist, F.1
Heulsenbeck, J.P.2
-
28
-
-
0033513117
-
Phylogenetic relationships of Meliola and Meliolina inferred from nuclear small subunit rRNA sequences
-
Saenz GS, Taylor JW. 1999. Phylogenetic relationships of Meliola and Meliolina inferred from nuclear small subunit rRNA sequences. Mycological Research 103: 1049-1056. http://dx.doi.org/10.1017/S0953756298008211
-
(1999)
Mycological Research
, vol.103
, pp. 1049-1056
-
-
Saenz, G.S.1
Taylor, J.W.2
-
29
-
-
67749119915
-
Ascomycota Tree of Life: A phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits
-
Schoch CL, Sung G-H, López-Giráldez F, Townsend JP, Miadlikowska J, Hofstetter V, Robbertse B, Matheny B, Kauff F, Wang Z, Gueidan C, Andrie RM, Trippe K, Ciufetti LM, Wynns A, Fraker E, Hodkinson BP, Bonito G, Groenewald JZ, Arzanlou M, Hoog GS, Crous PW, Hewitt D, Pfister D, Peterson K, Gryzenhout M, Wingfield MJ, Aptroot A, Suh S-O, Blackwell M, Hillis DM, Griffith GW, Castlebury LA, Rossman A, Lumbsch HT, Lücking R, Büdel B, Rauhut A, Diederich P, Ertz D, Geiser DM, Hosaka K, Inderbitzin P, Kohlmeyer J, Volkmann-Kohlmeyer B, Mostert L, O'Donnell K, Sipman H, Rogers JD, Shoemaker R, Sugiyama J, Summerbell RC, Untereiner W, Johnston PR, Stenroos S, Zuccaro A, Dyer PS, Crittenden PD, Cole MS, Hansen K, Trappe JM, Yahr R, Lutzoni F, Spatafora JW. 2009. Ascomycota Tree of Life: A phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits. Systematic Biology 58: 224-239. http://dx.doi.org/10.1093/sysbio/syp020
-
(2009)
Systematic Biology
, vol.58
, pp. 224-239
-
-
Schoch, C.L.1
Sung, G.-H.2
López-Giráldez, F.3
Townsend, J.P.4
Miadlikowska, J.5
Hofstetter, V.6
Robbertse, B.7
Matheny, B.8
Kauff, F.9
Wang, Z.10
Gueidan, C.11
Andrie, R.M.12
Trippe, K.13
Ciufetti, L.M.14
Wynns, A.15
Fraker, E.16
Hodkinson, B.P.17
Bonito, G.18
Groenewald, J.Z.19
Arzanlou, M.20
Hoog, G.S.21
Crous, P.W.22
Hewitt, D.23
Pfister, D.24
Peterson, K.25
Gryzenhout, M.26
Wingfield, M.J.27
Aptroot, A.28
Suh, S.-O.29
Blackwell, M.30
Hillis, D.M.31
Griffith, G.W.32
Castlebury, L.A.33
Rossman, A.34
Lumbsch, H.T.35
Lücking, R.36
Büdel, B.37
Rauhut, A.38
Diederich, P.39
Ertz, D.40
Geiser, D.M.41
Hosaka, K.42
Inderbitzin, P.43
Kohlmeyer, J.44
Volkmann-Kohlmeyer, B.45
Mostert, L.46
O'Donnell, K.47
Sipman, H.48
Rogers, J.D.49
Shoemaker, R.50
Sugiyama, J.51
Summerbell, R.C.52
Untereiner, W.53
Johnston, P.R.54
Stenroos, S.55
Zuccaro, A.56
Dyer, P.S.57
Crittenden, P.D.58
Cole, M.S.59
Hansen, K.60
Trappe, J.M.61
Yahr, R.62
Lutzoni, F.63
Spatafora, J.W.64
more..
-
30
-
-
84860250194
-
Fungal pathogens of 'cat's claws' from Brazil for biocontrol of Macfadyena unguis-cati
-
Silva M, Barreto RW, Pereira OL. 2012. Fungal pathogens of 'cat's claws' from Brazil for biocontrol of Macfadyena unguis-cati. Mycotaxon 119: 181-195. http://dx.doi.org/10.5248/119.181
-
(2012)
Mycotaxon
, vol.119
, pp. 181-195
-
-
Silva, M.1
Barreto, R.W.2
Pereira, O.L.3
-
31
-
-
34247558477
-
A five-gene phylogeny of Pezizomycotina
-
Spatafora JW, Sung GH, Johnson D, Hesse C, O'Rourke B, Serdani M, Spotts R, Lutzoni F, Hofstetter V, Miadlikowska J, Reeb V, Gueidan C, Fraker E, Lumbsch T, Lucking R, Schmitt I, Hosaka K, Aptroot A, Roux C, Miller AN, Geiser DM, Hafellner J, Hestmark G, Arnold AE, Budel B, Rauhut A, Hewitt D, Untereiner WA, Cole MS, Scheidegger C, Schultz M, Sipman H, Schoch CL. 2006. A five-gene phylogeny of Pezizomycotina. Mycologia 98: 1018-1028. http://dx.doi.org/10.3852/ mycologia.98.6.1018
-
(2006)
Mycologia
, vol.98
, pp. 1018-1028
-
-
Spatafora, J.W.1
Sung, G.H.2
Johnson, D.3
Hesse, C.4
O'Rourke, B.5
Serdani, M.6
Spotts, R.7
Lutzoni, F.8
Hofstetter, V.9
Miadlikowska, J.10
Reeb, V.11
Gueidan, C.12
Fraker, E.13
Lumbsch, T.14
Lucking, R.15
Schmitt, I.16
Hosaka, K.17
Aptroot, A.18
Roux, C.19
Miller, A.N.20
Geiser, D.M.21
Hafellner, J.22
Hestmark, G.23
Arnold, A.E.24
Budel, B.25
Rauhut, A.26
Hewitt, D.27
Untereiner, W.A.28
Cole, M.S.29
Scheidegger, C.30
Schultz, M.31
Sipman, H.32
Schoch, C.L.33
more..
-
32
-
-
79957613599
-
MEGA5: Molecular evolutionary genetics analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods
-
Tamura K, Peterson D, Peterson N, Stecher G, Nei M, Kumar S. 2011. MEGA5: Molecular evolutionary genetics analysis using Maximum Likelihood, Evolutionary Distance, and Maximum Parsimony Methods. Molecular Biology and Evolution 28: 2731-2739. http://dx.doi.org/10.1093/molbev/msr121
-
(2011)
Molecular Biology and Evolution
, vol.28
, pp. 2731-2739
-
-
Tamura, K.1
Peterson, D.2
Peterson, N.3
Stecher, G.4
Nei, M.5
Kumar, S.6
-
33
-
-
34247593125
-
Phylogenetic utility of protein (RPB2, beta-tubulin) and ribosomal (LSU, SSU) gene sequences in the systematics of Sordariomycetes (Ascomycota, Fungi)
-
Tang, AMC, Jeewon R, Hyde KD. 2007. Phylogenetic utility of protein (RPB2, beta-tubulin) and ribosomal (LSU, SSU) gene sequences in the systematics of Sordariomycetes (Ascomycota, Fungi). Antonie Van Leeuwenhoek 91: 327-349. http://dx.doi.org/10.1007/s10482-006-9120-8
-
(2007)
Antonie Van Leeuwenhoek
, vol.91
, pp. 327-349
-
-
Tang, A.M.C.1
Jeewon, R.2
Hyde, K.D.3
-
34
-
-
0025374564
-
Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species
-
Vilgalys R, Hester M. 1990. Rapid genetic identification and mapping of enzymatically amplified ribosomal DNA from several Cryptococcus species. Journal of Bacteriology 172: 4239-4246.
-
(1990)
Journal of Bacteriology
, vol.172
, pp. 4239-4246
-
-
Vilgalys, R.1
Hester, M.2
-
36
-
-
0000432452
-
Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics
-
Innis MA, Gelfand DH, Sninsky JJ, White TJ. (Eds.), San Diego, California, USA. Academic Press.
-
White TJ, Bruns T, Lee S, Taylor J. 1990. Amplification and direct sequencing of fungal ribosomal RNA genes for phylogenetics. In: Innis MA, Gelfand DH, Sninsky JJ, White TJ. (Eds.) PCR Protocols: A guide to methods and applications. San Diego, California, USA. Academic Press. pp. 315-322.
-
(1990)
PCR Protocols: A Guide to Methods and Applications
, pp. 315-322
-
-
White, T.J.1
Bruns, T.2
Lee, S.3
Taylor, J.4
-
37
-
-
34247575628
-
An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny
-
Zhang N, Castlebury LA, Miller AN, Huhndorf SM., Schoch CL, Seifert KA., Rossman AY, Rogers JD, Kohlmeyer J, Volkmann-Kohlmeyer B, Sung GH. 2006. An overview of the systematics of the Sordariomycetes based on a four-gene phylogeny. Mycologia 98: 1076-1087. http://dx.doi.org/10.3852/mycologia.98.6. 1076
-
(2006)
Mycologia
, vol.98
, pp. 1076-1087
-
-
Zhang, N.1
Castlebury, L.A.2
Miller, A.N.3
Huhndorf, S.M.4
Schoch, C.L.5
Seifert, K.A.6
Rossman, A.Y.7
Rogers, J.D.8
Kohlmeyer, J.9
Volkmann-Kohlmeyer, B.10
Sung, G.H.11
|