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Volumn 224, Issue 6, 2013, Pages

A novel bacterium that degrades aroclor-1254 and its bphc gene encodes an extradiol aromatic ring cleavage dioxygenase (EARCD)

Author keywords

Chloride ion; Chlorobenzoic acid; Extradiol dioxygenase; Metal ions; Polychlorinated biphenyl; Cyclodextrin

Indexed keywords

AROMATIC COMPOUNDS; BACTERIA; BIODEGRADATION; CALCIUM COMPOUNDS; CHLORIDE MINERALS; CLONING; COPPER COMPOUNDS; CYCLODEXTRINS; ENCODING (SYMBOLS); METAL IONS; METALS; ORGANIC POLLUTANTS; POLYCHLORINATED BIPHENYLS; SODIUM CHLORIDE;

EID: 84877050685     PISSN: 00496979     EISSN: 15732932     Source Type: Journal    
DOI: 10.1007/s11270-013-1587-0     Document Type: Article
Times cited : (9)

References (37)
  • 1
    • 37549072616 scopus 로고    scopus 로고
    • Characterization of multiple novel aerobic polychlorinated biphenyl (PCB) utilizing bacterial strains indigenous to contaminated tropical African soils
    • 10.1007/s10532-007-9122-x 1:CAS:528:DC%2BD2sXhsVKkurvO
    • Adebusoye, S. A., Picardal, F. W., Fuqua, C., Ilori, M. O., & Amund, O. O. (2008). Characterization of multiple novel aerobic polychlorinated biphenyl (PCB) utilizing bacterial strains indigenous to contaminated tropical African soils. Biodegradation, 19, 145-159.
    • (2008) Biodegradation , vol.19 , pp. 145-159
    • Adebusoye, S.A.1    Picardal, F.W.2    Fuqua, C.3    Ilori, M.O.4    Amund, O.O.5
  • 2
    • 0000973185 scopus 로고
    • Cadmium resistance screening in nitrilotriacetate-buffered minimal media
    • 1:CAS:528:DyaL1MXltlSlsLw%3D
    • Angle, J. S., & Chaney, R. L. (1989). Cadmium resistance screening in nitrilotriacetate-buffered minimal media. Applied and Environmental Microbiology, 55, 2101-2104.
    • (1989) Applied and Environmental Microbiology , vol.55 , pp. 2101-2104
    • Angle, J.S.1    Chaney, R.L.2
  • 3
    • 0033932785 scopus 로고    scopus 로고
    • Influence of chlorine substituents on rates of oxidation of chlorinated biphenyls by the biphenyl dioxygenase of Burkholderia sp. strain LB400
    • 10.1128/AEM.66.7.2928-2933.2000 1:CAS:528:DC%2BD3cXkslKltr8%3D
    • Arnett, C. M., Parales, J. V., & Haddock, J. D. (2000). Influence of chlorine substituents on rates of oxidation of chlorinated biphenyls by the biphenyl dioxygenase of Burkholderia sp. strain LB400. Applied and Environmental Microbiology, 66, 2928-2933.
    • (2000) Applied and Environmental Microbiology , vol.66 , pp. 2928-2933
    • Arnett, C.M.1    Parales, J.V.2    Haddock, J.D.3
  • 4
    • 0342813098 scopus 로고    scopus 로고
    • Biosurfactant enhanced removal of residual hydrocarbon from soil
    • 10.1016/S0169-7722(96)00034-4 1:CAS:528:DyaK2sXjtlWnu78%3D
    • Bai, G., Brusseau, M. L., & Miller, R. M. (1997). Biosurfactant enhanced removal of residual hydrocarbon from soil. Journal of Contaminant Hydrology, 25, 157-170.
    • (1997) Journal of Contaminant Hydrology , vol.25 , pp. 157-170
    • Bai, G.1    Brusseau, M.L.2    Miller, R.M.3
  • 5
    • 26444465561 scopus 로고    scopus 로고
    • Hexachlorobenzene in the global environment: Emissions, levels, distribution, trends and processes
    • 10.1016/j.scitotenv.2005.03.014 1:CAS:528:DC%2BD2MXhtVKhur7K
    • Barber, J. L., Sweetman, A. J., Wijk, D. V., & Jones, K. C. (2005). Hexachlorobenzene in the global environment: Emissions, levels, distribution, trends and processes. The Science of the Total Environment, 349, 1-44.
    • (2005) The Science of the Total Environment , vol.349 , pp. 1-44
    • Barber, J.L.1    Sweetman, A.J.2    Wijk, D.V.3    Jones, K.C.4
  • 6
    • 0022621961 scopus 로고
    • Rapid assay for screening and characterizing microorganisms for the ability to degrade polychlorinated biphenyls
    • 1:CAS:528:DyaL28XhvVWhs70%3D
    • Bedard, D. L., Unterman, R., Bopp, L. H., Brennan, M. J., Haberl, M. L., & Johnson, C. (1986). Rapid assay for screening and characterizing microorganisms for the ability to degrade polychlorinated biphenyls. Applied and Environmental Microbiology, 51, 761-768.
    • (1986) Applied and Environmental Microbiology , vol.51 , pp. 761-768
    • Bedard, D.L.1    Unterman, R.2    Bopp, L.H.3    Brennan, M.J.4    Haberl, M.L.5    Johnson, C.6
  • 8
    • 0001520086 scopus 로고
    • Determination of trace amounts of chlorine in naphtha
    • 10.1021/ac60122a018 1:CAS:528:DyaG2sXjtF2htg%3D%3D
    • Bergmann, J. G., & Sanik, J. (1957). Determination of trace amounts of chlorine in naphtha. Analytical Chemistry, 29, 241-243.
    • (1957) Analytical Chemistry , vol.29 , pp. 241-243
    • Bergmann, J.G.1    Sanik, J.2
  • 9
    • 0034722736 scopus 로고    scopus 로고
    • Genetic structure and functional implication of the fcb gene cluster for hydrolytic dechlorination of 4-chlorobenzoate from Pseudomonas sp. DJ-12
    • 10.1016/S0378-1119(00)00419-4 1:CAS:528:DC%2BD3cXosFeju78%3D
    • Chae, J. C., Kim, Y., Kim, Y. C., Zylstra, G. J., & Kim, C. K. (2000). Genetic structure and functional implication of the fcb gene cluster for hydrolytic dechlorination of 4-chlorobenzoate from Pseudomonas sp. DJ-12. Gene, 258, 109-116.
    • (2000) Gene , vol.258 , pp. 109-116
    • Chae, J.C.1    Kim, Y.2    Kim, Y.C.3    Zylstra, G.J.4    Kim, C.K.5
  • 10
    • 0036272092 scopus 로고    scopus 로고
    • Biodegradation of cis-dichloroethene as the sole carbon source by a β-proteobacterium
    • 10.1128/AEM.68.6.2726-2730.2002 1:CAS:528:DC%2BD38XksVWqs7Y%3D
    • Coleman, N. V., Mattes, T. E., Gossett, J. M., & Spain, J. C. (2002). Biodegradation of cis-dichloroethene as the sole carbon source by a β-proteobacterium. Applied and Environmental Microbiology, 68, 2726-2730.
    • (2002) Applied and Environmental Microbiology , vol.68 , pp. 2726-2730
    • Coleman, N.V.1    Mattes, T.E.2    Gossett, J.M.3    Spain, J.C.4
  • 11
    • 0029846961 scopus 로고    scopus 로고
    • Evolutionary relationships among extradiol dioxygenases
    • 1:CAS:528:DyaK28XmtFOks7g%3D
    • Eltis, L., & Bolin, J. (1996). Evolutionary relationships among extradiol dioxygenases. Journal of Bacteriology, 178, 5930-5937.
    • (1996) Journal of Bacteriology , vol.178 , pp. 5930-5937
    • Eltis, L.1    Bolin, J.2
  • 12
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • 10.2307/2408678
    • Felsenstein, J. (1985). Confidence limits on phylogenies: An approach using the bootstrap. Evolution, 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 13
    • 0346704525 scopus 로고
    • Utilization of the herbicide dicamba (2-methoxy-3,6-dichlorobenzoic acid) by soil bacteria
    • 1:CAS:528:DyaL2sXksleqtL8%3D
    • Ferrer, M. R., Ruiz, B. F., & Ramos, C. A. (1986). Utilization of the herbicide dicamba (2-methoxy-3,6-dichlorobenzoic acid) by soil bacteria. Agrochimica, 30, 458-464.
    • (1986) Agrochimica , vol.30 , pp. 458-464
    • Ferrer, M.R.1    Ruiz, B.F.2    Ramos, C.A.3
  • 14
    • 77957864667 scopus 로고    scopus 로고
    • Evidence of aerobic degradation of polychlorinated biphenyl as growth substrate by new bacteria Stenotrophomonas sp. JSG1 and Cupriavidus taiwanensis JSG2
    • Ganesh-Kumar, S., Solomon, R. D. J., Kalimuthu, K., & Vimalan, J. (2010). Evidence of aerobic degradation of polychlorinated biphenyl as growth substrate by new bacteria Stenotrophomonas sp. JSG1 and Cupriavidus taiwanensis JSG2. Carpathian Journal of Earth and Envionmental Science, 5, 169-176.
    • (2010) Carpathian Journal of Earth and Envionmental Science , vol.5 , pp. 169-176
    • Ganesh-Kumar, S.1    Solomon, R.D.J.2    Kalimuthu, K.3    Vimalan, J.4
  • 15
    • 0028180369 scopus 로고
    • 3,4-Dihydroxy phenylacetate 2,3-dioxygenase from Klebsiella pneumoniae, a Mg21-containing dioxygenase involved in aromatic catabolism
    • 1:CAS:528:DyaK2cXkslKqsr8%3D
    • Gibello, A., Ferrer, E., Martin, M., & Garrido-Pertierra, A. (1994). 3,4-Dihydroxy phenylacetate 2,3-dioxygenase from Klebsiella pneumoniae, a Mg21-containing dioxygenase involved in aromatic catabolism. The Biochemical Journal, 301, 145-150.
    • (1994) The Biochemical Journal , vol.301 , pp. 145-150
    • Gibello, A.1    Ferrer, E.2    Martin, M.3    Garrido-Pertierra, A.4
  • 16
    • 0026760856 scopus 로고
    • Microbial breakdown of halogenated aromatic pesticides and related compounds
    • 10.1111/j.1574-6968.1992.tb05823.x 1:CAS:528:DyaK38XmtVymsb4%3D
    • Haggblom, M. M. (1992). Microbial breakdown of halogenated aromatic pesticides and related compounds. FEMS Microbiology Review, 103, 29-72.
    • (1992) FEMS Microbiology Review , vol.103 , pp. 29-72
    • Haggblom, M.M.1
  • 17
  • 18
    • 73149093625 scopus 로고    scopus 로고
    • Characterization of a newly isolated biphenyl-degrading bacterium Dyella ginsengisoli LA-4
    • 10.1007/s12010-008-8513-8 1:CAS:528:DC%2BD1MXhsVKit7nF
    • Li, A., Qu, Y., Zhou, J., & Ma, F. (2009). Characterization of a newly isolated biphenyl-degrading bacterium Dyella ginsengisoli LA-4. Applied Biochemistry and Biotechnology, 159, 687-695.
    • (2009) Applied Biochemistry and Biotechnology , vol.159 , pp. 687-695
    • Li, A.1    Qu, Y.2    Zhou, J.3    Ma, F.4
  • 21
    • 0034656360 scopus 로고    scopus 로고
    • A novel bacterium that utilizes monochlorobiphenyls and 4-chlorobenzoate as growth substrates
    • 10.1111/j.1574-6968.2000.tb09066.x 1:CAS:528:DC%2BD3cXit1WgsLs%3D
    • Kim, S., & Picardal, F. W. (2000). A novel bacterium that utilizes monochlorobiphenyls and 4-chlorobenzoate as growth substrates. FEMS Microbiology Letters, 185, 225-229.
    • (2000) FEMS Microbiology Letters , vol.185 , pp. 225-229
    • Kim, S.1    Picardal, F.W.2
  • 22
    • 0025286409 scopus 로고
    • Degradation of monochlorobenzoic and dichlorobenzoic acid isomers by two natural isolates of Alcaligenes denitrificans
    • 10.1007/BF00423323 1:CAS:528:DyaK3cXls1yksro%3D
    • Miguez, C. B., Greer, C. W., & Ingram, J. M. (1990). Degradation of monochlorobenzoic and dichlorobenzoic acid isomers by two natural isolates of Alcaligenes denitrificans. Archives of Microbiology, 154, 139-143.
    • (1990) Archives of Microbiology , vol.154 , pp. 139-143
    • Miguez, C.B.1    Greer, C.W.2    Ingram, J.M.3
  • 23
    • 0030752851 scopus 로고    scopus 로고
    • Identification and modification of biphenyl dioxygenase sequences that determine the specificity of polychlorinated biphenyl degradation
    • 1:CAS:528:DyaK2sXlt1Wju7Y%3D
    • Mondello, F. J., Turcich, M. P., Lobos, J. H., & Erickson, B. D. (1997). Identification and modification of biphenyl dioxygenase sequences that determine the specificity of polychlorinated biphenyl degradation. Applied and Environmental Microbiology, 63, 3096-3103.
    • (1997) Applied and Environmental Microbiology , vol.63 , pp. 3096-3103
    • Mondello, F.J.1    Turcich, M.P.2    Lobos, J.H.3    Erickson, B.D.4
  • 24
    • 0032977236 scopus 로고    scopus 로고
    • Microbial heavy metal resistance
    • 10.1007/s002530051457
    • Nies. (1999). Microbial heavy metal resistance. Applied Microbiology and Biotechnology, 67, 730-750.
    • (1999) Applied Microbiology and Biotechnology , vol.67 , pp. 730-750
    • Nies1
  • 25
    • 17844397226 scopus 로고    scopus 로고
    • Aerobic degradation of polychlorinated biphenyls
    • 10.1007/s00253-004-1810-4 1:CAS:528:DC%2BD2MXjtlart7o%3D
    • Pieper, D. H. (2005). Aerobic degradation of polychlorinated biphenyls. Applied Microbiology and Biotechnology, 67, 170-191.
    • (2005) Applied Microbiology and Biotechnology , vol.67 , pp. 170-191
    • Pieper, D.H.1
  • 26
    • 0024553747 scopus 로고
    • Rapid extraction of bacterial genomic DNA with guanidium thiocyanate
    • 10.1111/j.1472-765X.1989.tb00262.x 1:CAS:528:DyaL1MXktlKit7o%3D
    • Pitcher, G. S., Saunders, N. A., & Owen, R. J. (1989). Rapid extraction of bacterial genomic DNA with guanidium thiocyanate. Letters in Applied Microbiology, 8, 151-156.
    • (1989) Letters in Applied Microbiology , vol.8 , pp. 151-156
    • Pitcher, G.S.1    Saunders, N.A.2    Owen, R.J.3
  • 27
    • 0027889354 scopus 로고
    • Selected factors limiting the microbial degradation of recalcitrant compounds
    • 10.1007/BF01569669 1:CAS:528:DyaK2cXislyrtLk%3D
    • Providenti, M. A., Lee, H., & Trevors, J. T. (1993). Selected factors limiting the microbial degradation of recalcitrant compounds. Journal of Industrial Microbiology and Biotechnology, 12, 379-395.
    • (1993) Journal of Industrial Microbiology and Biotechnology , vol.12 , pp. 379-395
    • Providenti, M.A.1    Lee, H.2    Trevors, J.T.3
  • 28
    • 0018969740 scopus 로고
    • Hybrid pathway for chlorobenzoate metabolism in Pseudomonas sp. B13 derivatives
    • 1:CAS:528:DyaL3cXkt1agtr0%3D
    • Reineke, W., & Knackmuss, H. J. (1980). Hybrid pathway for chlorobenzoate metabolism in Pseudomonas sp. B13 derivatives. Journal of Bacteriology, 142, 467-473.
    • (1980) Journal of Bacteriology , vol.142 , pp. 467-473
    • Reineke, W.1    Knackmuss, H.J.2
  • 29
    • 33646106096 scopus 로고    scopus 로고
    • Degradation of Aroclor 1242 dechlorination products in sediments by Burkholderia xenovorans LB400 (ohb) and Rhodococcus sp. strain RHA1 (fcb)
    • 10.1128/AEM.72.4.2476-2482.2006 1:CAS:528:DC%2BD28XktFagtb8%3D
    • Rodrigues, J. L. M., Kachel, C. A., Aiello, M. R., Quenssen, J. F., Maltseva, O. V., Tsoi, T. V., & Tiedje, J. M. (2006). Degradation of Aroclor 1242 dechlorination products in sediments by Burkholderia xenovorans LB400 (ohb) and Rhodococcus sp. strain RHA1 (fcb). Applied and Environmental Microbiology, 72, 2476-2482.
    • (2006) Applied and Environmental Microbiology , vol.72 , pp. 2476-2482
    • Rodrigues, J.L.M.1    Kachel, C.A.2    Aiello, M.R.3    Quenssen, J.F.4    Maltseva, O.V.5    Tsoi, T.V.6    Tiedje, J.M.7
  • 30
    • 0037677535 scopus 로고    scopus 로고
    • Impact of metals on the biodegradation of organic pollutants
    • 10.1289/ehp.5840 1:CAS:528:DC%2BD3sXlvF2ksrg%3D
    • Sandrin, T. R., & Maier, R. M. (2003). Impact of metals on the biodegradation of organic pollutants. Environmental Health Perspectives, 111, 1093-1101.
    • (2003) Environmental Health Perspectives , vol.111 , pp. 1093-1101
    • Sandrin, T.R.1    Maier, R.M.2
  • 31
    • 0029875603 scopus 로고    scopus 로고
    • Influence of chlorobenzoates on the utilization of chlorobiphenyls and chlorobenzoate mixtures by chlorobiphenyl/chlorobenzoate-mineralizing hybrid bacterial strains
    • 1:CAS:528:DyaK28XitlWjs7w%3D
    • Stratford, J., Wright, M. A., Reineke, W., Mokross, H., Havel, J., Knowles, C. J., & Robinson, G. R. (1996). Influence of chlorobenzoates on the utilization of chlorobiphenyls and chlorobenzoate mixtures by chlorobiphenyl/chlorobenzoate-mineralizing hybrid bacterial strains. Achieves of Microbiology, 165, 213-218.
    • (1996) Achieves of Microbiology , vol.165 , pp. 213-218
    • Stratford, J.1    Wright, M.A.2    Reineke, W.3    Mokross, H.4    Havel, J.5    Knowles, C.J.6    Robinson, G.R.7
  • 32
    • 0024653554 scopus 로고
    • Isolation and preliminary characterization of a 2 chlorobenzoate degrading Pseudomonas
    • 10.1139/m89-067 1:CAS:528:DyaL1MXkt1Slt78%3D
    • Sylvestre, M., Mailhiot, K., Ahmad, D., & Masse, R. (1989). Isolation and preliminary characterization of a 2 chlorobenzoate degrading Pseudomonas. Canadian Journal of Microbiology, 35, 439-443.
    • (1989) Canadian Journal of Microbiology , vol.35 , pp. 439-443
    • Sylvestre, M.1    Mailhiot, K.2    Ahmad, D.3    Masse, R.4
  • 33
    • 0031106003 scopus 로고    scopus 로고
    • Isolation of extradiol dioxygenase genes that are phylogenetically distant from other meta-cleavage dioxygenase genes
    • 10.1271/bbb.61.530 1:CAS:528:DyaK2sXit1aiu7g%3D
    • Takami, H., Kudo, T., & Horikoshi. (1997). Isolation of extradiol dioxygenase genes that are phylogenetically distant from other meta-cleavage dioxygenase genes. Bioscience, Biotechnology, and Biochemistry, 61, 530-532.
    • (1997) Bioscience, Biotechnology, and Biochemistry , vol.61 , pp. 530-532
    • Takami, H.1    Kudo, T.2    Horikoshi3
  • 35
    • 0029070327 scopus 로고
    • Influence of nonionic surfactants on bioavailability and biodegradation of polycyclic aromatic hydrocarbons
    • 1:CAS:528:DyaK2MXlsFyksb0%3D
    • Volkering, F., Breure, A. M., Van Andel, J. G., & Rulkens, W. H. (1995). Influence of nonionic surfactants on bioavailability and biodegradation of polycyclic aromatic hydrocarbons. Applied and Environmental Microbiology, 61, 1699-1705.
    • (1995) Applied and Environmental Microbiology , vol.61 , pp. 1699-1705
    • Volkering, F.1    Breure, A.M.2    Van Andel, J.G.3    Rulkens, W.H.4
  • 36
    • 0029787874 scopus 로고    scopus 로고
    • Effect of chlorobenzoates on the degradation of polychlorinated biphenyls (PCB) by Pseudomonas stutzeri
    • 10.1007/BF00340208
    • Vrana, B., Dercova, K., Balaz, S., & Sevcikova, A. (1996). Effect of chlorobenzoates on the degradation of polychlorinated biphenyls (PCB) by Pseudomonas stutzeri. World Journal of Microbiology and Biotechnology, 12, 323-326.
    • (1996) World Journal of Microbiology and Biotechnology , vol.12 , pp. 323-326
    • Vrana, B.1    Dercova, K.2    Balaz, S.3    Sevcikova, A.4
  • 37
    • 0033989751 scopus 로고    scopus 로고
    • Phylogenetic and phenotypic diversity of 4-chlorobenzoate-degrading bacteria isolated from soils
    • 10.1111/j.1574-6941.2000.tb00671.x 1:CAS:528:DC%2BD3cXhtVeksw%3D%3D
    • Yi, H. R., Min, K. H., Kim, C. K., & Ka, J. O. (2000). Phylogenetic and phenotypic diversity of 4-chlorobenzoate-degrading bacteria isolated from soils. FEMS Microbiology Ecology, 31, 53-60. Development group
    • (2000) FEMS Microbiology Ecology , vol.31 , pp. 53-60
    • Yi, H.R.1    Min, K.H.2    Kim, C.K.3    Ka, J.O.4


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