Phylogenetic and phenotypic diversity of 4-chlorobenzoate-degrading bacteria isolated from soils

FEMS Microbiology Ecology

Volumn 31, Issue 1, 2000, Pages 53-60

  Yi, Haak Rho ^a   Min, Kyung Hee ^a   Kirn, Chi Kyung ^b   Ka, Jong Ok ^a,c  

^a Seoul National University   (South Korea)

^b Sookmyung Women's University   (South Korea)

^c Department of Microbiology   (South Korea)

Author keywords

4 Chlorobenzoate; Bacterial diversity; Biodegradation

Indexed keywords

4 CHLOROBENZOIC ACID; PLASMID DNA;

BACTERIUM; GENETIC VARIATION; PHENOTYPE; PHYLOGENETICS; SOIL MICROORGANISM;

ARTICLE; BACTERIAL GROWTH; BACTERIUM ISOLATION; BIODEGRADATION; BIODIVERSITY; MICROCOCCUS; NONHUMAN; PHENOTYPE; PHYLOGENY; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; SOIL;

EID: 0033989751     PISSN: 01686496     EISSN: None     Source Type: Journal    
DOI: 10.1016/S0168-6496(99)00081-1     Document Type: Article

References (26)

1. Furukawa, K., Tomizuka, N. and Kamibayashi, A. (1979) Effect of chlorine substitution on the bacterial metabolism of various polychlorinated biphenyls. Appl. Environ. Microbiol. 38, 301-310.
2. Horavath, R.S. (1971) Comctabolism of the herbicide 2,3,6-trichlorobenzoate. J. Agric. Food Chem. 19, 291-293.
3. Furukawa, K. and Chakrabarty, A.M. (1982) Involvement of plasmids in total degradation of chlorinated biphenyls. Appl. Environ. Microbiol. 44, 619-626.
4. Masse, R., Messier, F., Peloquin, L., Ayotte, C. and Sylvestre, M. (1984) Microbial biodégradation of 4-chlorobiphenyl, a model compound of chlorinated biphenyls. Appl. Environ. Microbiol. 47, 947-951.
5. Adriaens, P. and Focht, D.D. (I990) Continuous coculture degradation of selected polychlorinated biphenyl congeners by acinetobacter spp. in an aerobic reactor system. Environ. Sci. Technol. 24, 10421049.
6. Marks, T.S., Smith, A.R.W. and Quirk, A.V. (1984) Degradation of 4-chlorobenzoic acid by Anhrobactcr sp., Appl. Environ. Microbiol. 48, 1020-1025.
7. Keil, H., Klages, U. and Lingens, F. (1981) Degradation of4-chlorobenzoate by Pseudomonas sp. CBS3 induction of catabolic enzymes. FEMS Microbiol. Lett. 10, 213-215.
8. van den Twcel, W.J.J., Kok, J.B. and de Dont, J.A.M. (1987) Reduc-. live dechlorination of 2,4-dichlorobenzoate to 4-chlorobenzoate and hydrolytic dechlorination of 4-chloro-, 4-bromo-, and 4-iodobenzoate by Alcaligenes iknitrificans NTB-1. Appl. Environ. Microbiol. 53, 810-815.
9. Klages, U. and Lingens, F. (I979) Degradation of 4-chlorobenzoic acid by a Noccmlia sp., FEMS Microbiol. Lett. 6, 201-203.
10. Horowitz, A., Suflita, J.M. and Tiedje, J.M. (1983) Reductive dehalogenations of halobenzoates by anaerobic lake sediment microorganisms. Appl. Environ. Microbiol. 45, 1459-1465.
11. Haggblom, M.M. (1992) Microbial breakdown of halogenated aromatic pesticides and related compounds. FEMS Microbiol. Rev. 103, 29-72.
12. Chang, K.-H., Liang, P.-H., Beck, W., Schollen, J.D. and DunawayMariano, D. (1992) Isolation and characterization of the three polypeptide components of 4-chlorobcnzoate dehalogenase from Pseudonwiuis sp. strain CBS-3. Biochemistry 31, 5605-5610.
13. Savard, P., Peloquin, L. and Sylvestre, M. (1986) Cloning of Pseiidomonas sp. strain CBS3 gene specifying dehalogenation of 4-chlorobenzoate. J. Bacteriol. 168, 81-85.
14. Schmilz, A., Gartemann, K.-H., Fiedler, J., Grund, E. and Eichenlaub, R. (1992) Cloning and sequence analysis of genes for dehalogenation of 4-chlorobenzoate from Anhrobactcr sp. strain SU. Appl. Environ. Microbiol. 58, 4068-4071.
15. Stanier, R.Y., Palleroni, N.J. and DoudorolT, M. (I966) The aerobic pseudomonads: a taxonomic study. J. Gen. Microbiol. 43, 159-271.
16. Sasser, M. (1990) Technical note 102: Tracking a strain using the Microbial Identification System. MIS Inc., North Newark, DE.
17. Versalovic, J., Schneider, M., de Bruijn, F.J. and Lupski, J.R. (1994) Genomic fingerprinting of bacteria using repetitive sequence-based polymerase chain reaction. Mol. Cell. Biol. 5, 25-40.
18. Ka, J.O. and Tiedje, J.M. (1994) Integration and excision of a 2,4dichloro-phcnoxyacetic acid-degradative plasmid in Alcaligenes para-doxus and evidence of its natural intergeneric transfer. J. Bacteriol. 176, 5284-5289.
19. Kado, C.I. and Liu, S.T. (1981) Rapid procedure for detection and isolation of large and small plasmids. J. Bacteriol. 145, 1365-1373.
20. Willetts, N.S. (1988) Conjug. Methods Microbiol. 21, 49-77.
21. Layton, A.C., Sanseverino, J., Wallace, W., Corcoran, C. and Sayler, O.S. (1992) Evidence for 4-chlorobenzoic acid dehalogenation mediated by plasmids related to pSS50. Appl. Environ. Microbiol. 58, 399-402.
22. Seo, D.I., Lim, J.Y., Kim, Y.C., Min, K.H. and Kim, C.K. (1997) Isolation of Pseuilomonas sp. S-47 and its degradation of 4-chlorobenzoic acid. J. Microbiol. 35, 188-192.
23. Arensdorf, J.J. and Focht, D.D. (1995) A nicla cleavage pathway for 4-chlorobcnzoate, an intermediate in the metabolism of 4-chlorobiphenyl by Pscudomonas cepacia P166. Appl. Environ. Microbiol. 61, 443-447.
24. Commandeur, L.C.M. and Parsons, J.R. (1990) Degradation ofhalogenated aromatic compounds. Biodegradation 1, 207-220.
25. Dorn, E., Hellig, M., Reineke, W. and Knackmuss, H.-J. (1974) Isolation and characterization of a 3-chlorobenzoate degrading Pseitdoinonas. Arch. Microbiol. 99, 61-70.
26. Chatterjee, O.K., Kellogg, S.T., Hamada, S. and Chakrabarty, A.M. (1981) Plasmid specifying total degradation of 3-chlorobenzoate by a modified ortho pathway. J. Bacteriol. 146, 639-646.