Characterization of a Novel Metal-Dependent D-Psicose 3-Epimerase from Clostridium scindens 35704

PLoS ONE

Volumn 8, Issue 4, 2013, Pages

  Zhang, Wenli ^a   Fang, Dan ^a   Xing, Qingchao ^a   Zhou, Leon ^a,b   Jiang, Bo ^a   Mu, Wanmeng ^a  

^a JIANGNAN UNIVERSITY   (China)

^b Roquette America   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL ENZYME; DEXTRO PSICOSE 3 EPIMERASE; FRUCTOSE; MANGANESE; UNCLASSIFIED DRUG; EPIMERASE; METAL; PSICOSE; RECOMBINANT PROTEIN;

AMINO ACID SEQUENCE; ARTICLE; BINDING SITE; CATALYSIS; CIRCULAR DICHROISM; CLOSTRIDIUM; CLOSTRIDIUM SCINDENS; CONCENTRATION (PARAMETERS); CONTROLLED STUDY; ENZYME ACTIVITY; ENZYME ANALYSIS; ENZYME METABOLISM; ENZYME PURIFICATION; ENZYME SPECIFICITY; ENZYME STABILITY; ENZYME STRUCTURE; ENZYME SUBSTRATE COMPLEX; IN VITRO STUDY; MELTING POINT; MICHAELIS CONSTANT; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PH; PROTEIN EXPRESSION; PROTEIN UNFOLDING; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY; TEMPERATURE; UREA MIDTRANSITION CONCENTRATION; CHEMISTRY; ENZYMOLOGY; GENE EXPRESSION; GENETICS; ISOLATION AND PURIFICATION; KINETICS; METABOLISM; MOLECULAR GENETICS;

CLOSTRIDIUM SCINDENS;

AMINO ACID SEQUENCE; CARBOHYDRATE EPIMERASES; CLONING, MOLECULAR; CLOSTRIDIUM; ENZYME STABILITY; FRUCTOSE; GENE EXPRESSION; HYDROGEN-ION CONCENTRATION; KINETICS; MANGANESE; METALS; MOLECULAR SEQUENCE DATA; RECOMBINANT PROTEINS; SEQUENCE ALIGNMENT; SUBSTRATE SPECIFICITY; TEMPERATURE;

EID: 84876964338     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0062987     Document Type: Article

References (26)

1. Oshima H, Kimura I, Izumori K, (2006) Psicose contents in various food products and its origin. Food Sci Technol Res 12: 137-143.
2. Mu W, Zhang W, Feng Y, Jiang B, Zhou L, (2012) Recent advances on applications and biotechnological production of D-psicose. Appl Microbiol Biotechnol 94: 1461-1467.
3. Hayashi N, Iida T, Yamada T, Okuma K, Takehara I, et al. (2010) Study on the postprandial blood glucose suppression effect of D-psicose in borderline diabetes and the safety of long-term ingestion by normal human subjects. Biosci Biotechnol Biochem 74: 510-519.
4. Iida T, Kishimoto Y, Yoshikawa Y, Hayashi N, Okuma K, et al. (2008) Acute D-psicose administration decreases the glycemic responses to an oral maltodextrin tolerance test in normal adults. J Nutr Sci Vitaminol (Tokyo) 54: 511-514.
5. Suna S, Yamaguchi F, Kimura S, Tokuda M, Jitsunari F, (2007) Preventive effect of D-psicose, one of rare ketohexoses, on di-(2-ethylhexyl) phthalate (DEHP)-induced testicular injury in rat. Toxicol Lett 173: 107-117.
6. Murata A, Sekiya K, Watanabe Y, Yamaguchi F, Hatano N, et al. (2003) A novel inhibitory effect of D-allose on production of reactive oxygen species from neutrophils. J Biosci Bioeng 96: 89-91.
7. Takata MK, Yamaguchi F, Nakanose K, Watanabe Y, Hatano N, et al. (2005) Neuroprotective effect of D-psicose on 6-hydroxydopamine-induced apoptosis in rat pheochromocytoma (PC12) cells. J Biosci Bioeng 100: 511-516.
8. Sun Y, Hayakawa S, Ogawa M, Izumori K, (2005) Evaluation of the site specific protein glycation and antioxidant capacity of rare sugar-protein/peptide conjugates. J Agric Food Chem 53: 10205-10212.
9. Sun Y, Hayakawa S, Izumori K, (2004) Modification of ovalbumin with a rare ketohexose through the Maillard reaction: effect on protein structure and gel properties. J Agric Food Chem 52: 1293-1299.
10. Izumori K, Khan AR, Okaya H, Tsumura T, (1993) A new enzyme, D-ketohexose 3-epimerase, from Pseudomonas sp. ST-24. Biosci Biotechnol Biochem 57: 1037-1039.
11. Itoh H, Sato T, Izumori K, (1995) Preparation of D-psicose from D-fructose by immobilized D-tagatose 3-epimerase. J Ferment Bioeng 80: 101-103.
12. Takeshita K, Suga A, Takada G, Izumori K, (2000) Mass production of D-psicose from d-fructose by a continuous bioreactor system using immobilized D-tagatose 3-epimerase. J Biosci Bioeng 90: 453-455.
13. Kim HJ, Hyun EK, Kim YS, Lee YJ, Oh DK, (2006) Characterization of an Agrobacterium tumefaciens D-psicose 3-epimerase that converts D-fructose to D-psicose. Appl Environ Microbiol 72: 981-985.
14. Zhang L, Mu W, Jiang B, Zhang T, (2009) Characterization of D-tagatose-3-epimerase from Rhodobacter sphaeroides that converts D-fructose into D-psicose. Biotechnol Lett 31: 857-862.
15. Mu W, Chu F, Xing Q, Yu S, Zhou L, et al. (2011) Cloning, expression, and characterization of a D-psicose 3-epimerase from Clostridium cellulolyticum H10. J Agric Food Chem 59: 7785-7792.
16. Zhu Y, Men Y, Bai W, Li X, Zhang L, et al. (2012) Overexpression of D-psicose 3-epimerase from Ruminococcus sp. in Escherichia coli and its potential application in D-psicose production. Biotechnol Lett 34: 1901-1906.
17. Kim K, Kim HJ, Oh DK, Cha SS, Rhee S, (2006) Crystal structure of D-psicose 3-epimerase from Agrobacterium tumefaciens and its complex with true substrate D-fructose: a pivotal role of metal in catalysis, an active site for the non-phosphorylated substrate, and its conformational changes. J Mol Biol 361: 920-931.
18. Yoshida H, Yamada M, Nishitani T, Takada G, Izumori K, et al. (2007) Crystal structures of D-tagatose 3-epimerase from Pseudomonas cichorii and its complexes with D-tagatose and D-fructose. J Mol Biol 374: 443-453.
19. Chan HC, Zhu Y, Hu Y, Ko TP, Huang CH, et al. (2012) Crystal structures of D-psicose 3-epimerase from Clostridium cellulolyticum H10 and its complex with ketohexose sugars. Protein Cell 3: 123-131.
20. Itoh H, Okaya H, Khan AR, Tajima S, Hayakawa S, et al. (1994) Purification and characterization of D-tagatose 3-epimerase from Pseudomonas sp. ST-24. Biosci Biotechnol Biochem 58: 2168-2171.
21. Ishida Y, Kamiya T, Itoh H, Kimura Y, Izumori K, (1997) Cloning and characterization of the D-tagatose 3-epimerase gene from Pseudomonas cichorii ST-24. J Ferment Bioeng 83: 529-534.
22. Choi JG, Ju YH, Yeom SJ, Oh DK, (2011) Improvement in the thermostability of D-psicose 3-epimerase from Agrobacterium tumefaciens by random and site-directed mutagenesis. Appl Environ Microbiol 77: 7316-7320.
23. Lee DW, Choe EA, Kim SB, Eom SH, Hong YH, et al. (2005) Distinct metal dependence for catalytic and structural functions in the l-arabinose isomerases from the mesophilic Bacillus halodurans and the thermophilic Geobacillus stearothermophilus. Arch Biochem Biophys 434: 333-343.
24. Lin CJ, Tseng WC, Lin TH, Liu SM, Tzou WS, et al. (2010) Characterization of a thermophilic L-rhamnose isomerase from Thermoanaerobacterium saccharolyticum NTOU1. J Agric Food Chem 58: 10431-10436.
25. Rhimi M, Bejar S, (2006) Cloning, purification and biochemical characterization of metallic-ions independent and thermoactive l-arabinose isomerase from the Bacillus stearothermophilus US100 strain. Biochim Biophys Acta 1760: 191-199.
26. Park CS, Yeom SJ, Kim HJ, Lee SH, Lee JK, et al. (2007) Characterization of ribose-5-phosphate isomerase of Clostridium thermocellum producing D-allose from D-psicose. Biotechnol Lett 29: 1387-1391.