Comparison of a loop-mediated isothermal amplification for orf virus with quantitative real-time PCR

Virology Journal

Volumn 10, Issue , 2013, Pages

  Wang, Guangxiang ^a,d   Shang, Youjun ^c,d   Wang, Yanhua ^a,d   Tian, Hong ^b   Liu, Xiangtao ^a,d  

^a State Key Laboratory of Veterinary Etiological Biology   (China)

^b National Foot and Mouth Disease Reference Laboratory   (China)

^c AGRO ENVIRONMENTAL PROTECTION INSTITUTE   (China)

^d INSTITUTE OF PLANT PROTECTION   (China)

Author keywords

Loop mediated isothermal amplification (LAMP); Orf virus; Real time PCR

Indexed keywords

ARTICLE; COHABITATION; CONTAGIOUS ECTHYMA; DIAGNOSTIC PROCEDURE; GENE IDENTIFICATION; LOOP MEDIATED ISOTHERMAL AMPLIFICATION; NONHUMAN; PREVALENCE; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SENSITIVITY AND SPECIFICITY; VIRUS GENE; VIRUS INFECTION;

CAPRA HIRCUS; FOOT-AND-MOUTH DISEASE VIRUS; ORF VIRUS; OVIS ARIES;

EID: 84876814912     PISSN: None     EISSN: 1743422X     Source Type: Journal    
DOI: 10.1186/1743-422X-10-138     Document Type: Article

References (24)

1. Ovine Diseases: Orf. Haig DM, Mercer AA, Vet Res 1998 29 311 326 9689744
2. Detection of orf virus from an outbreak in goats and its genetic relation with other parapoxviruses. Mondal B, Bera AK, Hosamani M, Tembhurne PA, Bandyopadhyay SK, Vet Res Commun 2006 30 531 539 10.1007/s11259-006-3270-z 16755365 (Pubitemid 43842216)
3. Detection and diagnosis of parapoxvirus by the polymerase chain reaction. Inoshima Y, Morooka A, Sentsui H, J Virol Methods 2000 84 201 208 10.1016/S0166-0934(99)00144-5 10680970 (Pubitemid 30055308)
4. Polymerase chain reaction for laboratory diagnosis of orf virus infections. Torfason EG, Gunadottir S, J Clin Virol 2002 24 79 84 10.1016/S1386-6532(01)00232-3 11744431 (Pubitemid 34016016)
5. Laboratory diagnosis of contagious ecthyma: comparison of different PCR protocols with virus isolation in cell culture. Kottaridi C, Nomikou K, Lelli R, Markoulatos P, Mangana O, J Virol Methods 2006 134 119 124 10.1016/j.jviromet. 2005.12.005 16417927
6. Differential diagnosis of orf viruses by a single-step PCR. Chan KW, Hsu WL, Wang CY, Yang CH, Lin FY, Chulakasian S, Wong ML, J Virol Methods 2009 160 85 89 10.1016/j.jviromet.2009.04.025 19409929
7. A real time PCR assay for the detection and quantification of orf virus. Gallina L, Dal Pozzo F, McInnes CJ, Cardeti G, Guercio A, Battilani M, Ciulli S, Scagliarini A, J Virol Methods 2006 134 140 145 10.1016/j.jviromet.2005.12.014 16430972 (Pubitemid 44294305)
8. Development of a loop-mediated isothermal amplification for rapid detection of orf virus. Tsai SM, Chana KW, Hsu WL, Chang TJ, Wong ML, Wang CY, J Virol Methods 2009 157 200 204 10.1016/j.jviromet.2009.01.003 19186192
9. Rapid detection of orf virus by loop-mediated isothermal amplification based on the DNA polymerase gene. Li J, Song D, He W, Bao Y, Lu R, Su G, Wang G, Lu H, Zhao K, Gao F, Arch Virol in press 10871386
10. Detection of loop-mediated isothermal reaction by turbidity derived from magnesium pyrophosphate formation. Mori Y, Nagamine K, Tomita N, Notomi T, Biochem Biophys Res Commun 2001 289 150 154 10.1006/bbrc.2001.5921 11708792 (Pubitemid 33108807)
11. Loop-mediated isothermal amplification (LAMP) of gene sequences and simple visual detection of products. Tomita N, Mori Y, Kanda H, Notomi T, Nat Protoc 2008 3 877 882 10.1038/nprot.2008.57 18451795 (Pubitemid 351639031)
12. Loop-mediated isothermal amplification for rapid detection of Bacillus anthracis spores. Qiao YM, Guo YC, Zhang XE, Zhou YF, Zhang ZP, Wei HP, Yang RF, Wang DB, Biotechnol Lett 2007 29 1939 1946 10.1007/s10529-007-9472-9 17673950 (Pubitemid 350043604)
13. Stability of loop-mediated isothermal amplification (LAMP) reagents and its amplification efficiency on crude trypanosome DNA templates. Thekisoe OMM, Bazie RSB, Coronel-Servian AM, Sugimoto C, Kawazu S, Inoue N, J Vet Med Sci 2009 71 471 475 10.1292/jvms.71.471 19420851
14. Molecular genetic analysis of parapoxviruses pathogenic for humans. Mercer AA, Fleming S, Robinson A, Nettleton P, Reid H, Arch Virol 1997 13 25 34 (Pubitemid 127502128)
15. Characterisation of immunodominant protein encoded by the F1L gene of orf virus strains isolated in Italy. Scagliarini A, Ciulli S, Battilani M, Jacoboni I, Montesi F, Casadio R, Prosperi S, Arch Virol 2002 147 1989 1995 10.1007/s00705-002-0850-2 12376759 (Pubitemid 35218722)
16. Characterization of parapoxviruses circulating among wild Japanese serows (Capricornis crispus). Inoshima Y, Murakami K, Wu D, Sentsui H, Microbiol Immunol 2002 46 583 587 12363024 (Pubitemid 34951161)
17. Comparative sequence analysis of major envelope protein gene (B2L) of Indian orf viruses isolated from sheep and goats. Hosamani M, Bhanuprakash V, Scagliarini A, Singh RK, Vet Microbiol 2006 116 317 324 10.1016/j.vetmic.2006. 04.028 16777357 (Pubitemid 44251097)
18. Identification and phylogenetic analysis of orf virus from goats in Taiwan. Chan KW, Lin JW, Lee SH, Liao CJ, Tsai MC, Hsu WL, Wong ML, Shih HC, Virus Genes 2007 35 705 712 10.1007/s11262-007-0144-6 17682935 (Pubitemid 350012775)
19. Detection and phylogenetic analysis of Orf virus from sheep in Brazil: a case report. Abrahão JS, Campos RK, Trindade GS, Guedes MIM, Lobato ZIP, Mazur C, Ferreira PCP, Bonjardim CA, Kroon EG, Virol J 2009 4 47 50
20. Detection and phylogenetic analysis of orf virus from sheep in Brazil: acase report. Jonatas SA, Rafael KC, Giliane ST, Maria IMG, Zelia IPL, Carlos M, Paulo CPF, Claudio AB, Erna GK, J Virol 2009 6 47 10.1186/1743-422X-6-47
21. Diagnosis and phylogenetic analysis of Orf virus from goats in China: a case report. Zhang KS, Shang YJ, Jin Y, Wang GX, Zheng HX, He JJ, Lu ZX, Liu XT, Virol J 2010 7 78 82 10.1186/1743-422X-7-78 20416112
22. Identification and phylogenetic analysis of an orf virus isolated from an outbreak in sheep in the Jilin province of China. Zhao K, Song D, He W, Lu H, Zhang B, Li C, Chen K, Gao F, Vet Microbiol 2010 142 408 415 10.1016/j.vetmic.2009.10.006 19948384
23. Loop-mediated isothermal amplification (LAMP) assays for detection of Theileria parva infections targeting the PIM and p150 genes. Thekisoe OMM, Rambritch NE, Nakao R, Bazie RS, Mbati P, Namangala B, Malele I, Skilton RA, Jongejan F, Sugimoto C, Kawazu SI, Inoue N, Int J Parasitol 2010 40 55 61 10.1016/j.ijpara.2009.07.004 19654009
24. Wang PJ, Development and application of real-time PCR for detection of Toxoplasma gondii Chongqing University of Medical Sciences Master's thesis. 2005