Using QIIME to analyze 16s rRNA gene sequences from microbial communities

Current Protocols in Microbiology

Volumn , Issue SUPPL.27, 2012, Pages

  Kuczynski, Justin ^a   Stombaugh, Jesse ^a   Walters, William Anton ^a   González, Antonio ^b   Caporaso, J Gregory ^c   Knight, Rob ^a  

^a UNIVERSITY OF COLORADO   (United States)

^b UCB 450   (United States)

^c Center for Materials Interfaces in Research and Applications   (United States)

Author keywords

16S; Bioinformatics; Microbial ecology; QIIME; Software; SSU

Indexed keywords

RNA 16S; BACTERIAL DNA;

ALPHA DIVERSITY; ARTICLE; BETA DIVERSITY; CLINICAL PROTOCOL; COMPUTER ANALYSIS; COMPUTER INTERFACE; COMPUTER PROGRAM; DATA ANALYSIS; FUNGAL COMMUNITY; MICROBIAL COMMUNITY; MOLECULAR PHYLOGENY; NONHUMAN; ORGANISM COMMUNITY; PRIORITY JOURNAL; SEQUENCE ALIGNMENT; SEQUENCE ANALYSIS; SPECIES DIVERSITY; TAXONOMIC IDENTIFICATION; VIRAL COMMUNITY; WEB BROWSER; WORKFLOW; BACTERIUM; BIODIVERSITY; BIOLOGY; CLASSIFICATION; DNA SEQUENCE; GENETICS; INSTRUMENTATION; ISOLATION AND PURIFICATION; METHODOLOGY; PHYLOGENY;

BACTERIA; BIODIVERSITY; COMPUTATIONAL BIOLOGY; DNA, BACTERIAL; PHYLOGENY; RNA, RIBOSOMAL, 16S; SEQUENCE ANALYSIS, DNA; SOFTWARE;

EID: 84876715756     PISSN: 19348525     EISSN: 19348533     Source Type: Journal    
DOI: 10.1002/9780471729259.mc01e05s27     Document Type: Article

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