Streptomyces griseorubens mediated delignification of paddy straw for improved enzymatic saccharification yields

Bioresource Technology

Volumn 135, Issue , 2013, Pages 12-17

  Saritha, M ^a   Arora, Anju ^a   Singh, Surender ^a   Nain, Lata ^a  

^a INDIAN AGRICULTURAL RESEARCH INSTITUTE   (India)

Author keywords

Biological pretreatment; Delignification; Enzymatic saccharification; Paddy straw; Streptomyces griseorubens

Indexed keywords

DELIGNIFICATION; ENZYMATIC HYDROLYSIS; LIGNIN; MOLECULAR BIOLOGY; RECOVERY; SACCHARIFICATION;

BIOLOGICAL PRE-TREATMENT; CARBOHYDRATE CONTENT; ENZYMATIC SACCHARIFICATION; LIGNIN RECOVERY; SOLID-STATE FERMENTATION; STREPTOMYCES GRISEORUBENS; SUGAR RECOVERY; WHITE ROT FUNGI;

BACTERIA;

ACID PRECIPITABLE POLYMERIC LIGNIN; LIGNIN; SUGAR; UNCLASSIFIED DRUG;

BACTERIUM; CARBOHYDRATE; ENZYME ACTIVITY; FERMENTATION; LIGNIN; PADDY FIELD; PLANT EXTRACT; POLYMER; SOLUBILIZATION; STRAW; SUGAR;

ABSORPTION; ARTICLE; BACTERIAL STRAIN; BACTERIUM ISOLATE; BIOFUEL PRODUCTION; CARBOHYDRATE ANALYSIS; CONTROLLED STUDY; DELIGNIFICATION; DEPOLYMERIZATION; GROWTH RATE; HYDROLYSIS; INCUBATION TIME; INOCULATION; NONHUMAN; PRIORITY JOURNAL; SACCHARIFICATION; SOLID STATE FERMENTATION; STRAW; STREPTOMYCES; STREPTOMYCES GRISEORUBENS;

BACTERIA; DELIGNIFICATION; ENZYMES; PRETREATMENT; SACCHARIFICATION; WHEAT STRAW;

ACTINOBACTERIA (CLASS); FUNGI; STREPTOMYCES GRISEORUBENS;

CARBOHYDRATE METABOLISM; CELLULASE; FERMENTATION; LIGNIN; MOLECULAR SEQUENCE DATA; ORYZA SATIVA; STREPTOMYCES; WASTE PRODUCTS;

EID: 84876496380     PISSN: 09608524     EISSN: 18732976     Source Type: Journal    
DOI: 10.1016/j.biortech.2012.11.040     Document Type: Article

References (34)

1. Aidoo K.E., Hendry R., Wood B.J.B. Estimation of fungal growth in a solid state fermentation system. Eur. J. Appl. Microbiol. Biotechnol. 1981, 12:6-9.
2. Allen O.N. Experiments in Soil Bacteriology 1959, Burgess, Minneapolis. third ed.
3. Arora A., Nain L., Gupta J.K. Solid-state fermentation of wood residues by Streptomyces griseus B1, a soil isolate, and solubilisation of lignins. World J. Microbiol. Biotechnol. 2005, 21:303-308.
4. Atlas R.M. Handbook of Microbiological Media 1997, CRC Press, USA. second ed.
5. Crawford D.L., Pometto A.L., Crawford R.L. Lignin degradation by Streptomyces viridosporus, isolation and characterization of a new polymeric lignin degradation intermediate. Appl. Environ. Microbiol. 1983, 45:898-904.
6. Ehrman, T., 1996. NREL CAT Task Laboratory Analytical Procedure #004: Determination of Acid-Soluble Lignin in Biomass. 1-13.
7. Faatih M., Widada J., Ngadiman Succession of actinomycetes during composting process of dairy-farm waste investigated by culture-dependent and independent approaches. Indian J. Biotechnol. 2008, 13(2):1085-1091.
8. Felsenstein J. Evolutionary trees from DNA sequences: a maximum likelihood approach. J. Mol. Evol. 1981, 17:368-376.
9. Godden B., Ball A.S., Helvensteian P., McCarthy A., Penninckx M.J. Towards elucidation of the lignin degradation pathway in actinomycetes. J. Gen. Microbiol. 1992, 1992(138):2441-2448.
10. Hendriks A.T.W.M., Zeeman G. Pretreatments to enhance the digestibility of lignocellulosic biomass. Bioresour. Technol. 2009, 100:10-18.
11. Jing D., Wang J. Controlling the simultaneous production of laccase and lignin peroxidase from Streptomyces cinnamomensis by medium formulation. Biotechnol. Biofuels 2012, 5:15.
12. Keller F.A., Hamillton T.E., Nguyon Q.A. Microbial pretreatment of biomass potential for reducing severity of thermo-chemical biomass pretreatment. Appl. Biochem. Biotechnol. 2003, 105:27-41.
13. Ki-Oh, H., Bahlman, J., Donald, S.J., James, R.T., Weiyu, F., 2008. Glucosamine and Method of Making Glucosamine from Microbial Biomass. United States Patent H002218.
14. Lee J.-W., Gwak K.-S., Park J.-Y., Park M.-J., Choi D.-H., Kwon M.-C. Biological pretreatment of softwood Pinus densiflora by three white rot fungi. J. Microbiol. 2007, 45(6):485-491.
15. Leisola M.S.A., Thanei-Wyss U., Feichter A. Strategies for production of high ligninase activity by Phanerochaete chrysosporium. J. Biotechnol. 1985, 3:97-107.
16. McCarthy A.J. Lignocellulose-degrading actinomycetes. FEMS Microbiol. Rev. 1987, 46:145-163.
17. Ooshima T., Kuramitsu H.K. Actinomyces viscosus cell-free synthesis of extracellular slime polysaccharide. Microbiol. Immunol. 1985, 29(6):479-485.
18. Parisi F. Advances in lignocellulosics hydrolysis and in the utilization of the hydrolysates. Advances in Biochemical Engineering and Biotechnology 1989, vol. 38:53-87. Springer-Verlag, Berlin.
19. Ramachandra M., Crawford D.L., Pometto A.L. Extracellular enzyme activities during lignocellulose degradation by Streptomyces spp.: a comparative study of wild-type and genetically manipulated strains. Appl. Environ. Microbiol. 1987, 53:2754-2760.
20. Saitou N., Nei M. The neighbour-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 1987, 4:406-425.
21. Salvachuá D., Prieto A., López-Abelairas M., Lu-Chang T., Martínez á.T., Martínez M.J. Fungal pretreatment: an alternative in second-generation ethanol from wheat straw. Bioresour. Technol. 2011, 102:7500-7506.
22. Saritha M., Arora A., Nain L. Pretreatment of paddy straw with Trametes hirsuta for improved enzymatic saccharification. Bioresour. Technol. 2012, 104:459-465.
23. Shi J., Ratna R., Sharma-Shivappa, Chinn M., Howell N. Effect of microbial pretreatment on enzymatic hydrolysis and fermentation of cotton stalks for ethanol production. Biomass Bioenerg. 2008, 33:88-96.
24. Sukumaran R.K., Surender V.J., Sindhu R., Binod P., Janu K.U., Sajna K.V., Rajasree K.P., Pandey A. Lignocellulosic ethanol in India: prospects, challenges and feedstock availability. Bioresour. Technol. 2010, 101:4826-4833.
25. Tamura K., Peterson D., Peterson N., Stecher G., Nei M., Kumar S. MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods. Mol. Biol. Evol. 2011, 28:2731-2739.
26. Tuyen V.D., Cone J.W., Baars J.J.P., Sonnenberg A.S.M., Hendriks W.H. Fungal strain and incubation period affect chemical composition and nutrient availability of wheat straw for rumen fermentation. Bioresour. Technol. 2012, 111:336-342.
27. Updegraff D.M. Semi-micro determination of cellulose in biological material. Anal. Biochem. 1969, 32:424-428.
28. Wan C., Li Y. Microbial delignification of corn stover by Ceriporiopsis subvermispora for improving cellulose digestibility. Enzyme Microb. Technol. 2010, 47:31-36.
29. Wyman C.E., Dale B.E., Elander R.T., Holtzapple M., Ladisch M.R., Lee Y.Y. Coordinated development of leading biomass pretreatment technologies. Bioresour. Technol. 2005, 96:1959-1966.
30. Ximenes E., Kim Y., Moiser N., Dien B., Ladisch M. Deactivation of cellulases by phenols. Enzyme Microb. Technol. 2011, 48:54-60.
31. Xu J., Yang Q. Isolation and characterization of rice straw degrading Streptomyces griseorubens C-5. Biodegradation 2010, 21(1):107-116.
32. Yamagishi K., Kimura T., Watanabe T. Treatment of rice straw with selected Cyathus stercoreus strains to improve enzymatic saccharification. Bioresour. Technol. 2011, 102:6937-6943.
33. Zeng J., Singh D., Laskar D.D., Chen S. Deconstruction of wheat straw lignin by Streptomyces viridosporus as insight into biological degradation mechanism. Int. J. Environ. Sci. Technol. 2012, 10.1007/s13762-012-0085-z.
34. Zhang Y.H.-P., Himmel M.E., Mielenz J.R. Outlook for cellulase improvement: screening and selection strategies. Biotechnol. Adv. 2006, 24:452-481.