메뉴 건너뛰기




Volumn 51, Issue 2, 2013, Pages 154-163

Phylogenetic position of kontumia (Polypodiaceae) inferred from four chloroplast DNA regions

Author keywords

Fern; Kontumia; Leptochilus lineage; Microsoroideae; Molecular phylogeny; Polypodiaceae

Indexed keywords

BACTERIA (MICROORGANISMS); FILICOPHYTA; GYMNOGRAMMITIS DAREIFORMIS; HETEROPHYLLA; LEPTOCHILUS; POLYPODIACEAE;

EID: 84876486685     PISSN: 16744918     EISSN: 17596831     Source Type: Journal    
DOI: 10.1111/j.1759-6831.2012.00230.x     Document Type: Article
Times cited : (24)

References (45)
  • 1
    • 18244388069 scopus 로고
    • Gymnogrammitidaceae Ching, a new fern family
    • Ching R-C. 1966. Gymnogrammitidaceae Ching, a new fern family. Acta Phytotaxonomica Sinica 11: 11-16.
    • (1966) Acta Phytotaxonomica Sinica , vol.11 , pp. 11-16
    • Ching, R.-C.1
  • 2
    • 80052472709 scopus 로고    scopus 로고
    • A linear sequence of extant families and genera of lycophytes and ferns
    • Christenhusz MJM, Zhang X-C, Schneider H. 2011. A linear sequence of extant families and genera of lycophytes and ferns. Phytotaxa 19: 7-54.
    • (2011) Phytotaxa , vol.19 , pp. 7-54
    • Christenhusz, M.J.M.1    Zhang, X.-C.2    Schneider, H.3
  • 3
    • 0030816742 scopus 로고    scopus 로고
    • Can three incongruence tests predict when data should be combined?
    • Cunningham CW. 1997. Can three incongruence tests predict when data should be combined? Molecular Biology and Evolution 14: 733-740. (Pubitemid 27287294)
    • (1997) Molecular Biology and Evolution , vol.14 , Issue.7 , pp. 733-740
    • Cunningham, C.W.1
  • 5
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein J. 1985. Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39: 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 7
    • 0011996124 scopus 로고    scopus 로고
    • Systematics of the ant-fern genus Lecanopteris (Polypodiaceae): Testing phylogenetic hypotheses with DNA sequences
    • Haufler CH, Grammer WA, Hennipman E, Ranker TA, Smith AR, Schneider H. 2003. Systematics of the ant-fern genus Lecanopteris (Polypodiaceae): Testing phylogenetic hypotheses with DNAsequences. Systematic Botany 28: 217- 227. (Pubitemid 36610733)
    • (2003) Systematic Botany , vol.28 , Issue.2 , pp. 217-227
    • Haufler, C.H.1    Grammer, W.A.2    Hennipman, E.3    Ranker, T.A.4    Smith, A.R.5    Schneider, H.6
  • 8
    • 34848903237 scopus 로고    scopus 로고
    • Hyalotrichopteris is indeed a Campyloneurum (Polypodiaceae)
    • DOI 10.1640/0002-8444(2007)97[127:HIIACP]2.0.CO;2
    • Kreier H-P, Alvarado AFR, Smith AR, Schneider H. 2007. Hyalotrichopteris is indeed a Campyloneurum (Polypodiaceae). American Fern Journal 97: 127-135. (Pubitemid 47511920)
    • (2007) American Fern Journal , vol.97 , Issue.3 , pp. 127-135
    • Kreier, H.-P.1    Alvarado, A.F.R.2    Smith, A.R.3    Schneider, H.4
  • 9
    • 32544434350 scopus 로고    scopus 로고
    • Phylogeny and biogeography of the staghorn fern genus Platycerium (Polypodiaceae, Polypodiidae)
    • Kreier H-P, Schneider H. 2006. Phylogeny and biogeography of the staghorn fern genus Platycerium (Polypodiaceae, Polypodiidae). American Journal of Botany 93: 217- 225. (Pubitemid 43234788)
    • (2006) American Journal of Botany , vol.93 , Issue.2 , pp. 217-225
    • Kreier, H.-P.1    Schneider, H.2
  • 10
    • 50249176443 scopus 로고    scopus 로고
    • The microsoroid ferns: Inferring the relationships of a highly diverse lineage of Paleotropical epiphytic ferns (Polypodiaceae, Polypodiopsida)
    • Kreier H-P, Zhang X-C, Muth H, Schneider H. 2008. The microsoroid ferns: Inferring the relationships of a highly diverse lineage of Paleotropical epiphytic ferns (Polypodiaceae, Polypodiopsida). Molecular Phylogenetics and Evolution 48: 1155-1167.
    • (2008) Molecular Phylogenetics and Evolution , vol.48 , pp. 1155-1167
    • Kreier, H.-P.1    Zhang, X.-C.2    Muth, H.3    Schneider, H.4
  • 11
    • 84859809050 scopus 로고    scopus 로고
    • Phylogenetic position of Wenchengia (Lamiaceae): A taxonomically enigmatic and critically endangered genus
    • Li B, Xu W, Tu T, Wang Z, Olmstead RG, Peng H, Francisco- Ortega J, Cantino PD, Zhang D. 2012. Phylogenetic position of Wenchengia (Lamiaceae): A taxonomically enigmatic and critically endangered genus. Taxon 61: 392- 401.
    • (2012) Taxon , vol.61 , pp. 392-401
    • Li, B.1    Xu, W.2    Tu, T.3    Wang, Z.4    Olmstead, R.G.5    Peng, H.6    Francisco-Ortega, J.7    Cantino, P.D.8    Zhang, D.9
  • 12
    • 84255189457 scopus 로고    scopus 로고
    • Phylogenetic position of the genus Hattorioceros (Anthoceratophyta)
    • Li J, Zhang L, Zhou L. 2011. Phylogenetic position of the genus Hattorioceros (Anthoceratophyta). Taxon 60: 1633-1636.
    • (2011) Taxon , vol.60 , pp. 1633-1636
    • Li, J.1    Zhang, L.2    Zhou, L.3
  • 14
    • 65249176173 scopus 로고    scopus 로고
    • Advances in the studies of lycophytes and monilophytes with reference to systematic arrangement of families distributed in China
    • Liu H-M, Wang L, Zhang X-C, Zeng H. 2008. Advances in the studies of lycophytes and monilophytes with reference to systematic arrangement of families distributed in China. Journal of Systematics and Evolution 46: 808-829.
    • (2008) Journal of Systematics and Evolution , vol.46 , pp. 808-829
    • Liu, H.-M.1    Wang, L.2    Zhang, X.-C.3    Zeng, H.4
  • 15
    • 36849068284 scopus 로고    scopus 로고
    • Molecular phylogeny of the fern family dryopteridaceae inferred from chloroplast rbcL and atpB genes
    • DOI 10.1086/521710
    • Liu H-M, Zhang X-C, Wang W, Qiu Y-L, Chen Z-D. 2007. Molecular phylogeny of the fern family Dryopteridaceae inferred from chloroplast rbcL and atpB genes. International Journal of Plant Sciences 168: 1311-1323. (Pubitemid 350219958)
    • (2007) International Journal of Plant Sciences , vol.168 , Issue.9 , pp. 1311-1323
    • Liu, H.-M.1    Zhang, X.-C.2    Wang, W.3    Qiu, Y.-L.4    Chen, Z.-D.5
  • 16
    • 33845259585 scopus 로고    scopus 로고
    • Phylogenetic position of the monotypic genus Metapolypodium Ching endemic to Asia: Evidence from chloroplast DNA sequences of rbcL gene and rps4-trnS region
    • DOI 10.1360/aps050088
    • Lu S-G, Li C-X. 2006. Phylogenetic position of the monotypic genus Metapolypodium Ching endemic to Asia: Evidence from chloroplast DNA sequences of rbcL gene and rps4- trnS region. Acta Phytotaxonomica Sinica 44: 494-502. (Pubitemid 44860202)
    • (2006) Acta Phytotaxonomica Sinica , vol.44 , Issue.5 , pp. 494-502
    • Lu, S.-G.1    Li, C.-X.2
  • 18
    • 0029364389 scopus 로고
    • A phylogenetic analysis of monocotyledons based on the chloroplast gene rps4, using parsimony and a new numerical phonetics method
    • Nadot S, Blair G, Carter L, Lacroix R, Lejeune B. 1995. A phylogenetic analysis of monocotyledons based on the chloroplast gene rps4, using parsimony and a new numerical phonetics method. Molecular Phylogenetics and Evolution 4: 257-282.
    • (1995) Molecular Phylogenetics and Evolution , vol.4 , pp. 257-282
    • Nadot, S.1    Blair, G.2    Carter, L.3    Lacroix, R.4    Lejeune, B.5
  • 19
    • 0030717630 scopus 로고    scopus 로고
    • The microsoroid ferns
    • Nooteboom H. 1997. The microsoroid ferns. Blumea 42: 261- 395.
    • (1997) Blumea , vol.42 , pp. 261-395
    • Nooteboom, H.1
  • 20
    • 68049085766 scopus 로고    scopus 로고
    • New insights into the phylogeny of Pleopeltis and related Neotropical genera (Polypoidaceae, Polypodiopsida)
    • Otto EM, Janßen T, KreierH-P, Schneider H. 2009. New insights into the phylogeny of Pleopeltis and related Neotropical genera (Polypoidaceae, Polypodiopsida). Molecular Phylogenetics and Evolution 53: 190-201.
    • (2009) Molecular Phylogenetics and Evolution , vol.53 , pp. 190-201
    • Otto, E.M.1    Janßen, T.2    Kreier, H.-P.3    Schneider, H.4
  • 21
    • 45849154165 scopus 로고    scopus 로고
    • JModelTest: Phylogenetic model averaging
    • DOI 10.1093/molbev/msn083
    • Posada D. 2008. jModelTest: Phylogenetic model averaging. Molecular Biology and Evolution 25: 1253-1256. (Pubitemid 351882013)
    • (2008) Molecular Biology and Evolution , vol.25 , Issue.7 , pp. 1253-1256
    • Posada, D.1
  • 22
    • 23744507531 scopus 로고    scopus 로고
    • Phylogeny and evolution of ferns (monilophytes) with a focus on the early leptosporangiate divergences
    • Pryer KM, Schuettpelz E, Wolf PG, Schneider H, Smith AR, Cranfill R. 2004. Phylogeny and evolution of ferns (monilophytes) with a focus on the early leptosporangiate divergences. American Journal of Botany 91: 1582- 1598. (Pubitemid 43193719)
    • (2004) American Journal of Botany , vol.91 , Issue.10 , pp. 1582-1598
    • Pryer, K.M.1    Schuettpelz, E.2    Wolf, P.G.3    Schneider, H.4    Smith, A.R.5    Cranfill, R.6
  • 23
    • 0001368574 scopus 로고
    • Phylogenetic relationships of extant ferns based on evidence from morphology and rbcL sequences
    • Pryer KM, Smith AR, Skog JE. 1995. Phylogenetic relationships of extant ferns based on evidence from morphology and rbcL sequences. American Fern Journal 85: 205- 282.
    • (1995) American Fern Journal , vol.85 , pp. 205-282
    • Pryer, K.M.1    Smith, A.R.2    Skog, J.E.3
  • 24
    • 79952176159 scopus 로고    scopus 로고
    • online, Available at, accessed 27 September 2011
    • Rambaut A, Drummond AJ. 2009. Tracer, version 1.5 [online]. Available at http://tree.bio.ed.ac.uk/software/tracer/[accessed 27 September 2011].
    • (2009) Tracer, Version 1.5
    • Rambaut, A.1    Drummond, A.J.2
  • 25
    • 3042623645 scopus 로고    scopus 로고
    • Phylogeny and evolution of grammitid ferns (Grammitidaceae): A case of rampant morphological homoplasy
    • Ranker TA, Smith AR, Parris BS, Geiger JMO, Haufler CH, Straub SCK, Schneider H. 2004. Phylogeny and evolution of grammitid ferns (Grammitidaceae): A case of rampant morphological homoplasy. Taxon 53: 415-428. (Pubitemid 38831184)
    • (2004) Taxon , vol.53 , Issue.2 , pp. 415-428
    • Ranker, T.A.1    Smith, A.R.2    Parris, B.S.3    Geiger, J.M.O.4    Haufler, C.H.5    Straub, S.C.K.6    Schneider, H.7
  • 26
    • 0041386108 scopus 로고    scopus 로고
    • MrBayes 3: Bayesian phylogenetic inference under mixed models
    • DOI 10.1093/bioinformatics/btg180
    • Ronquist F, Huelsenbeck JP. 2003. MrBayes 3: Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574. (Pubitemid 37038874)
    • (2003) Bioinformatics , vol.19 , Issue.12 , pp. 1572-1574
    • Ronquist, F.1    Huelsenbeck, J.P.2
  • 27
    • 33746495088 scopus 로고    scopus 로고
    • The relationships of Microsorum (Polypodiaceae) species occurring in New Zealand
    • Schneider H, Kreier H-P, Perrie LR, Brownsey PJ. 2006. The relationships of Microsorum (Polypodiaceae) species occurring in New Zealand. New Zealand Journal of Botany 44: 121-127. (Pubitemid 44133761)
    • (2006) New Zealand Journal of Botany , vol.44 , Issue.2 , pp. 121-127
    • Schneider, H.1    Kreier, H.-P.2    Perrie, L.R.3    Brownsey, P.J.4
  • 28
    • 0036861854 scopus 로고    scopus 로고
    • Gymnogrammitis dareiformis is a polygrammoid fern (Polypodiaceae) - Resolving an apparent conflict between morphological and molecular data
    • DOI 10.1007/s00606-002-0207-z
    • Schneider H, Smith AR, Cranfill R, Haufler CH, Ranker TA, Hildebrand T. 2002. Gymnogrammitis dareiformis is a polygrammoid fern (Polypodiaceae): Resolving an apparent conflict between morphological and molecular data. Plant Systematics and Evolution 234: 121-136. (Pubitemid 35436638)
    • (2002) Plant Systematics and Evolution , vol.234 , Issue.1-4 , pp. 121-136
    • Schneider, H.1    Smith, A.R.2    Cranfill, R.3    Haufler, C.H.4    Ranker, T.A.5    Hildebrand, T.6
  • 29
    • 2442472188 scopus 로고    scopus 로고
    • Unraveling the phylogeny of polygrammoid ferns (Polypodiaceae and Grammitidaceae): Exploring aspects of the diversification of epiphytic plants
    • DOI 10.1016/j.ympev.2003.09.018
    • Schneider H, Smith AR, Cranfill R, Hildebrand TJ, Haufler CH, Ranker TA. 2004. Unraveling the phylogeny of polygrammoid ferns (Polypodiaceae and Grammitidaceae): Exploring aspects of the diversification of epiphytic plants. Molecular Phylogenetics and Evolution 31: 1041-1063. (Pubitemid 38610975)
    • (2004) Molecular Phylogenetics and Evolution , vol.31 , Issue.3 , pp. 1041-1063
    • Schneider, H.1    Smith, A.R.2    Cranfill, R.3    Hildebrand, T.J.4    Haufler, C.H.5    Ranker, T.A.6
  • 30
    • 70349491259 scopus 로고    scopus 로고
    • Is morphology really at odds with molecules in estimating fern phylogeny?
    • Schneider H, Smith AR, Pryer KM. 2009. Is morphology really at odds with molecules in estimating fern phylogeny? Systematic Botany 34: 455-475.
    • (2009) Systematic Botany , vol.34 , pp. 455-475
    • Schneider, H.1    Smith, A.R.2    Pryer, K.M.3
  • 31
    • 35348837919 scopus 로고    scopus 로고
    • Fern phylogeny inferred from 400 leptosporangiate species and three plastid genes
    • Schuettpelz E, Pryer KM. 2007. Fern phylogeny inferred from 400 leptosporangiate species and three plastid genes. Taxon 56: 1037-1050.
    • (2007) Taxon , vol.56 , pp. 1037-1050
    • Schuettpelz, E.1    Pryer, K.M.2
  • 32
    • 50249112344 scopus 로고    scopus 로고
    • Taxonomy of the fern genus Leptochilus Kaulf (Polypodiaceae)
    • Shi L, Zhang X-C. 1999. Taxonomy of the fern genus Leptochilus Kaulf. (Polypodiaceae). Acta Phytotaxonomica Sinica 37: 145-152.
    • (1999) Acta Phytotaxonomica Sinica , vol.37 , pp. 145-152
    • Shi, L.1    Zhang, X.-C.2
  • 33
    • 0036555068 scopus 로고    scopus 로고
    • Intrafamilial relationships of the thelypteroid ferns (Thelypteridaceae)
    • Smith AR, Cranfill RB. 2002. Intrafamilial relationships of the thelypteroid ferns (Thelypteridaceae). American Fern Journal 92: 131-149. (Pubitemid 35211874)
    • (2002) American Fern Journal , vol.92 , Issue.2 , pp. 131-149
    • Smith, A.R.1    Cranfill, R.B.2
  • 35
    • 78650409190 scopus 로고    scopus 로고
    • Systematics of grammitid ferns (Polypodiaceae): Using morphology and plastid data to resolve the circumscriptions of Melpomene and the polyphyletic genera Lellingeria and Terpsichore
    • Sundue MA, Islam MB, Ranker TA. 2010. Systematics of grammitid ferns (Polypodiaceae): Using morphology and plastid data to resolve the circumscriptions of Melpomene and the polyphyletic genera Lellingeria and Terpsichore. Systematic Botany 35: 701-715.
    • (2010) Systematic Botany , vol.35 , pp. 701-715
    • Sundue, M.A.1    Islam, M.B.2    Ranker, T.A.3
  • 37
    • 0026261665 scopus 로고
    • Universal primers for amplification of three non-coding regions of chloroplast DNA
    • Taberlet P, Gielly L, Pauton G, Bouvet J. 1991. Universal primers for amplification of three non-coding regions of chloroplast DNA. Plant Molecular Biology 17: 1105-1109.
    • (1991) Plant Molecular Biology , vol.17 , pp. 1105-1109
    • Taberlet, P.1    Gielly, L.2    Pauton, G.3    Bouvet, J.4
  • 38
    • 80054941054 scopus 로고    scopus 로고
    • The status of Urocarpidium (Malvaceae): Insight from nuclear and plastid-based phylogenies
    • Tate JA. 2011. The status of Urocarpidium (Malvaceae): Insight from nuclear and plastid-based phylogenies. Taxon 60: 1330-1338.
    • (2011) Taxon , vol.60 , pp. 1330-1338
    • Tate, J.A.1
  • 39
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • DOI 10.1093/nar/25.24.4876
    • Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG. 1997. The Clustal X windows interface: Flexible strategies for multiple sequences alignment aided by quality analysis tools. Nucleic Acids Research 24: 4876-4882. (Pubitemid 28022245)
    • (1997) Nucleic Acids Research , vol.25 , Issue.24 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 40
    • 57649121955 scopus 로고    scopus 로고
    • Morphology and evolution of epiphytic Davalliaceae scales
    • Tsutsumi C, Kato M. 2008. Morphology and evolution of epiphytic Davalliaceae scales. Botany 86: 1393-1403.
    • (2008) Botany , vol.86 , pp. 1393-1403
    • Tsutsumi, C.1    Kato, M.2
  • 41
    • 70649091123 scopus 로고    scopus 로고
    • Phylogeny of the paleotropical fern genus Lepisorus (Polypodiaceae, Polypodiopsida) inferred from four chloroplast DNA regions
    • Wang L, Qi X-P, Xiang Q-P, Heinrichs J, Schneider H, Zhang X-C. 2010a. Phylogeny of the paleotropical fern genus Lepisorus (Polypodiaceae, Polypodiopsida) inferred from four chloroplast DNA regions. Molecular Phylogenetics and Evolution 54: 211-225.
    • (2010) Molecular Phylogenetics and Evolution , vol.54 , pp. 211-225
    • Wang, L.1    Qi, X.-P.2    Xiang, Q.-P.3    Heinrichs, J.4    Schneider, H.5    Zhang, X.-C.6
  • 42
    • 73349092390 scopus 로고    scopus 로고
    • A molecular phylogeny and a revised classification of tribe Lepisoreae (Polypodiaceae) based on an analysis of four plastid DNA regions
    • Wang L, Wu Z-Q, Xiang Q-P, Heinrichs J, Schneider H, Zhang X-C. 2010b. A molecular phylogeny and a revised classification of tribe Lepisoreae (Polypodiaceae) based on an analysis of four plastid DNA regions. Botanical Journal of the Linnean Society 162: 28-38.
    • (2010) Botanical Journal of the Linnean Society , vol.162 , pp. 28-38
    • Wang, L.1    Wu, Z.-Q.2    Xiang, Q.-P.3    Heinrichs, J.4    Schneider, H.5    Zhang, X.-C.6
  • 43
    • 18244370243 scopus 로고    scopus 로고
    • A new genus and two new species of ferns from Vietnam
    • Wu S-G, Phan KL, Xiang J-Y. 2005. A new genus and two new species of ferns from Vietnam. Novon 15: 245-249. (Pubitemid 40631231)
    • (2005) Novon , vol.15 , Issue.1 , pp. 245-249
    • Sugong, W.1    Phan, K.L.2    Jianying, X.3
  • 44
    • 77953787556 scopus 로고    scopus 로고
    • Davalliaceae
    • Beijing: Science Press
    • Wu S-H, Wang C-H. 1999. Davalliaceae. In: Reipublicae Popularis Sinicae. Beijing: Science Press. 6 (1): 161- 197.
    • (1999) Reipublicae Popularis Sinicae , vol.6 , Issue.1 , pp. 161-197
    • Wu, S.-H.1    Wang, C.-H.2
  • 45
    • 0001354070 scopus 로고
    • Evolution of higher-plant chloroplast DNA-encoded genes: Implications for structure- function and phylogenetic studies
    • Zurawski G, Clegg MT. 1987. Evolution of higher-plant chloroplast DNA-encoded genes: Implications for structure- function and phylogenetic studies. Annual Review of Plant Physiology 38: 391-418.
    • (1987) Annual Review of Plant Physiology , vol.38 , pp. 391-418
    • Zurawski, G.1    Clegg, M.T.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.